RNA–Protein interactions for RNA: ENST00000635647.1

PTBP1-221, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-221ENST00000635647 RIN2Q8WYP3 895 aaPredicted RBP16.04■□□□□ 0.16
PTBP1-221ENST00000635647 TNFRSF25Q93038 417 aa16.04■□□□□ 0.16
PTBP1-221ENST00000635647 ZEB2O60315 1214 aa16.04■□□□□ 0.16
PTBP1-221ENST00000635647 PLEKP08567 350 aaPredicted RBP16.04■□□□□ 0.16
PTBP1-221ENST00000635647 PAFAH1B1P43034 410 aa16.04■□□□□ 0.16
PTBP1-221ENST00000635647 GRIK5Q16478 980 aa16.04■□□□□ 0.16
PTBP1-221ENST00000635647 CLEC4GQ6UXB4 293 aa16.04■□□□□ 0.16
PTBP1-221ENST00000635647 KRT25Q7Z3Z0 450 aa16.04■□□□□ 0.16
PTBP1-221ENST00000635647 CDCA7Q9BWT1 371 aaPredicted RBP16.04■□□□□ 0.16
PTBP1-221ENST00000635647 PKD1L3Q7Z443 1732 aa16.03■□□□□ 0.16
PTBP1-221ENST00000635647 PARP4Q9UKK3 1724 aaKnown RBP16.03■□□□□ 0.16
PTBP1-221ENST00000635647 CKAP4Q07065 602 aaKnown RBP16.03■□□□□ 0.16
PTBP1-221ENST00000635647 BEND6Q5SZJ8 279 aaPredicted RBP16.03■□□□□ 0.16
PTBP1-221ENST00000635647 ZFYVE27Q5T4F4 411 aa16.03■□□□□ 0.16
PTBP1-221ENST00000635647 CNNM4Q6P4Q7 775 aa16.03■□□□□ 0.16
PTBP1-221ENST00000635647 CEP57Q86XR8 500 aa16.03■□□□□ 0.16
PTBP1-221ENST00000635647 POTEDQ86YR6 584 aa16.03■□□□□ 0.16
PTBP1-221ENST00000635647 FNBP4Q8N3X1 1017 aaPredicted RBP16.03■□□□□ 0.16
PTBP1-221ENST00000635647 LACRTQ9GZZ8 138 aa16.03■□□□□ 0.16
PTBP1-221ENST00000635647 ECM2O94769 699 aaPredicted RBP16.03■□□□□ 0.16
PTBP1-221ENST00000635647 ERLIN2O94905 339 aa16.03■□□□□ 0.16
PTBP1-221ENST00000635647 PBX1P40424 430 aa16.03■□□□□ 0.16
PTBP1-221ENST00000635647 UBXN2AP68543 259 aa16.03■□□□□ 0.16
PTBP1-221ENST00000635647 SLC7A5Q01650 507 aa16.03■□□□□ 0.16
PTBP1-221ENST00000635647 PLEKHG2Q9H7P9 1386 aa16.03■□□□□ 0.16
PTBP1-221ENST00000635647 USP17L5A8MUK1 530 aa16.03■□□□□ 0.16
PTBP1-221ENST00000635647 MEIS1O00470 390 aa16.03■□□□□ 0.16
PTBP1-221ENST00000635647 EBAG9O00559 213 aa16.03■□□□□ 0.16
PTBP1-221ENST00000635647 LLGL1Q15334 1064 aa16.03■□□□□ 0.16
PTBP1-221ENST00000635647 RDH13Q8NBN7 331 aa16.03■□□□□ 0.16
PTBP1-221ENST00000635647 MLXIPQ9HAP2 919 aa16.03■□□□□ 0.16
PTBP1-221ENST00000635647 SMARCAL1Q9NZC9 954 aa16.03■□□□□ 0.16
PTBP1-221ENST00000635647 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.02■□□□□ 0.16
PTBP1-221ENST00000635647 CYTH3O43739 400 aa16.02■□□□□ 0.16
PTBP1-221ENST00000635647 MOCS3O95396 460 aa16.02■□□□□ 0.16
PTBP1-221ENST00000635647 CCNE1P24864 410 aa16.02■□□□□ 0.16
PTBP1-221ENST00000635647 ARHGAP25P42331 645 aa16.02■□□□□ 0.16
PTBP1-221ENST00000635647 SLC20A2Q08357 652 aa16.02■□□□□ 0.16
PTBP1-221ENST00000635647 TUBB2AQ13885 445 aa16.02■□□□□ 0.16
PTBP1-221ENST00000635647 ARHGEF1Q92888 912 aaKnown RBP16.02■□□□□ 0.16
PTBP1-221ENST00000635647 TUBB2BQ9BVA1 445 aa16.02■□□□□ 0.16
PTBP1-221ENST00000635647 BARHL2Q9NY43 387 aa16.02■□□□□ 0.16
PTBP1-221ENST00000635647 MAD2L2Q9UI95 211 aa16.02■□□□□ 0.16
PTBP1-221ENST00000635647 SAMM50Q9Y512 469 aa16.02■□□□□ 0.16
PTBP1-221ENST00000635647 ZNF142P52746 1687 aaPredicted RBP16.02■□□□□ 0.16
PTBP1-221ENST00000635647 MAGEA9P43362 315 aa16.02■□□□□ 0.15
PTBP1-221ENST00000635647 CDK8P49336 464 aa16.02■□□□□ 0.15
PTBP1-221ENST00000635647 ODF2Q5BJF6 829 aa16.02■□□□□ 0.15
PTBP1-221ENST00000635647 ITIH6Q6UXX5 1313 aa16.02■□□□□ 0.15
PTBP1-221ENST00000635647 SHTN1A0MZ66 631 aa16.01■□□□□ 0.15
PTBP1-221ENST00000635647 MAGEA1P43355 309 aa16.01■□□□□ 0.15
PTBP1-221ENST00000635647 GRM4Q14833 912 aa16.01■□□□□ 0.15
PTBP1-221ENST00000635647 IQCEQ6IPM2 695 aa16.01■□□□□ 0.15
PTBP1-221ENST00000635647 SND1Q7KZF4 910 aaKnown RBP eCLIP16.01■□□□□ 0.15
PTBP1-221ENST00000635647 ALS2CR12Q96Q35 445 aa16.01■□□□□ 0.15
PTBP1-221ENST00000635647 THAP9Q9H5L6 903 aa16.01■□□□□ 0.15
PTBP1-221ENST00000635647 NUP188Q5SRE5 1749 aa16.01■□□□□ 0.15
PTBP1-221ENST00000635647 NAALADL2Q58DX5 795 aa16.01■□□□□ 0.15
PTBP1-221ENST00000635647 CEP95Q96GE4 821 aa16.01■□□□□ 0.15
PTBP1-221ENST00000635647 TRIM9Q9C026 710 aa16.01■□□□□ 0.15
PTBP1-221ENST00000635647 IRF2BP1Q8IU81 584 aa16.01■□□□□ 0.15
PTBP1-221ENST00000635647 AFAP1L1Q8TED9 768 aa16.01■□□□□ 0.15
PTBP1-221ENST00000635647 DHTKD1Q96HY7 919 aaPredicted RBP16.01■□□□□ 0.15
PTBP1-221ENST00000635647 USP40Q9NVE5 1235 aa16.01■□□□□ 0.15
PTBP1-221ENST00000635647 MYO1AQ9UBC5 1043 aa16.01■□□□□ 0.15
PTBP1-221ENST00000635647 CTDP1Q9Y5B0 961 aaPredicted RBP16.01■□□□□ 0.15
PTBP1-221ENST00000635647 MYH7P12883 1935 aa16■□□□□ 0.15
PTBP1-221ENST00000635647 FRMD3A2A2Y4 597 aa16■□□□□ 0.15
PTBP1-221ENST00000635647 STXBP3O00186 592 aa16■□□□□ 0.15
PTBP1-221ENST00000635647 TAF4BQ92750 862 aa16■□□□□ 0.15
PTBP1-221ENST00000635647 NUP58Q9BVL2 599 aa16■□□□□ 0.15
PTBP1-221ENST00000635647 ADAMTSL3P82987 1691 aa16■□□□□ 0.15
PTBP1-221ENST00000635647 DDX39AO00148 427 aaKnown RBP16■□□□□ 0.15
PTBP1-221ENST00000635647 TDP2O95551 362 aa16■□□□□ 0.15
PTBP1-221ENST00000635647 PDE6BP35913 854 aa16■□□□□ 0.15
PTBP1-221ENST00000635647 EIF4A3P38919 411 aaKnown RBP16■□□□□ 0.15
PTBP1-221ENST00000635647 RASSF7Q02833 373 aa16■□□□□ 0.15
PTBP1-221ENST00000635647 TEX2Q8IWB9 1127 aa16■□□□□ 0.15
PTBP1-221ENST00000635647 CCDC155Q8N6L0 562 aa16■□□□□ 0.15
PTBP1-221ENST00000635647 CEP89Q96ST8 783 aa16■□□□□ 0.15
PTBP1-221ENST00000635647 CAPN11Q9UMQ6 739 aa16■□□□□ 0.15
PTBP1-221ENST00000635647 BAZ2AQ9UIF9 1905 aaKnown RBP16■□□□□ 0.15
PTBP1-221ENST00000635647 RNF40O75150 1001 aa16■□□□□ 0.15
PTBP1-221ENST00000635647 HERVK_113P62684 666 aa16■□□□□ 0.15
PTBP1-221ENST00000635647 ZBED6P86452 979 aa16■□□□□ 0.15
PTBP1-221ENST00000635647 NCAPGQ9BPX3 1015 aa16■□□□□ 0.15
PTBP1-221ENST00000635647 DBNDD1Q9H9R9 158 aa16■□□□□ 0.15
PTBP1-221ENST00000635647 FAM53CQ9NYF3 392 aa16■□□□□ 0.15
PTBP1-221ENST00000635647 USP21Q9UK80 565 aa16■□□□□ 0.15
PTBP1-221ENST00000635647 C4AP0C0L4 1744 aa16■□□□□ 0.15
PTBP1-221ENST00000635647 C4BP0C0L5 1744 aa16■□□□□ 0.15
PTBP1-221ENST00000635647 SPATA31A1Q5TZJ5 1347 aa15.99■□□□□ 0.15
PTBP1-221ENST00000635647 LRRIQ3A6PVS8 624 aaPredicted RBP15.99■□□□□ 0.15
PTBP1-221ENST00000635647 NCK2O43639 380 aa15.99■□□□□ 0.15
PTBP1-221ENST00000635647 MUM1L1Q5H9M0 696 aa15.99■□□□□ 0.15
PTBP1-221ENST00000635647 ADAT2Q7Z6V5 191 aaKnown RBP15.99■□□□□ 0.15
PTBP1-221ENST00000635647 JPH2Q9BR39 696 aaPredicted RBP15.99■□□□□ 0.15
PTBP1-221ENST00000635647 TRIM31Q9BZY9 425 aa15.99■□□□□ 0.15
PTBP1-221ENST00000635647 REXO2Q9Y3B8 237 aaKnown RBP15.99■□□□□ 0.15
PTBP1-221ENST00000635647 COL1A1P02452 1464 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms