RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 CLEC17AQ6ZS10 378 aa12.71□□□□□ -0.37
COL11A1-211ENST00000635193 PI4K2BQ8TCG2 481 aa12.71□□□□□ -0.37
COL11A1-211ENST00000635193 SPZ1Q9BXG8 430 aa12.71□□□□□ -0.37
COL11A1-211ENST00000635193 PSTPIP2Q9H939 334 aa12.71□□□□□ -0.37
COL11A1-211ENST00000635193 ABCC12Q96J65 1359 aa12.71□□□□□ -0.38
COL11A1-211ENST00000635193 SH3BP5O60239 455 aa12.71□□□□□ -0.38
COL11A1-211ENST00000635193 GAS7O60861 476 aa12.71□□□□□ -0.38
COL11A1-211ENST00000635193 MFAP3LO75121 409 aa12.71□□□□□ -0.38
COL11A1-211ENST00000635193 GOLGA8HP0CJ92 632 aa12.71□□□□□ -0.38
COL11A1-211ENST00000635193 LMNB1P20700 586 aa12.71□□□□□ -0.38
COL11A1-211ENST00000635193 DHX9Q08211 1270 aaKnown RBP12.71□□□□□ -0.38
COL11A1-211ENST00000635193 SLFN12Q8IYM2 578 aa12.71□□□□□ -0.38
COL11A1-211ENST00000635193 PDZD8Q8NEN9 1154 aa12.71□□□□□ -0.38
COL11A1-211ENST00000635193 KDM6BO15054 1643 aa12.7□□□□□ -0.38
COL11A1-211ENST00000635193 FTCDO95954 541 aa12.7□□□□□ -0.38
COL11A1-211ENST00000635193 ATF7P17544 494 aaPredicted RBP12.7□□□□□ -0.38
COL11A1-211ENST00000635193 ADORA1P30542 326 aa12.7□□□□□ -0.38
COL11A1-211ENST00000635193 TTLL7Q6ZT98 887 aa12.7□□□□□ -0.38
COL11A1-211ENST00000635193 TOGARAM2Q6ZUX3 1019 aa12.7□□□□□ -0.38
COL11A1-211ENST00000635193 TUBB6Q9BUF5 446 aa12.7□□□□□ -0.38
COL11A1-211ENST00000635193 CXorf56Q9H5V9 222 aa12.7□□□□□ -0.38
COL11A1-211ENST00000635193 ZCCHC17Q9NP64 241 aaKnown RBP12.7□□□□□ -0.38
COL11A1-211ENST00000635193 IRAK4Q9NWZ3 460 aa12.7□□□□□ -0.38
COL11A1-211ENST00000635193 BCAMP50895 628 aa12.7□□□□□ -0.38
COL11A1-211ENST00000635193 PLTPP55058 493 aa12.7□□□□□ -0.38
COL11A1-211ENST00000635193 SLC7A5Q01650 507 aa12.7□□□□□ -0.38
COL11A1-211ENST00000635193 MAGI3Q5TCQ9 1506 aa12.7□□□□□ -0.38
COL11A1-211ENST00000635193 APOEP02649 317 aa12.7□□□□□ -0.38
COL11A1-211ENST00000635193 NAA30Q147X3 362 aaPredicted RBP12.7□□□□□ -0.38
COL11A1-211ENST00000635193 CAPRIN2Q6IMN6 1127 aaKnown RBP12.7□□□□□ -0.38
COL11A1-211ENST00000635193 NBPF10Q6P3W6 841 aaKnown RBP12.7□□□□□ -0.38
COL11A1-211ENST00000635193 LARP4BQ92615 738 aaKnown RBP12.7□□□□□ -0.38
COL11A1-211ENST00000635193 SRPRBQ9Y5M8 271 aaKnown RBP12.7□□□□□ -0.38
COL11A1-211ENST00000635193 COL4A3BPQ9Y5P4 624 aa12.7□□□□□ -0.38
COL11A1-211ENST00000635193 NR5A1Q13285 461 aa12.7□□□□□ -0.38
COL11A1-211ENST00000635193 ZYXQ15942 572 aaKnown RBP12.7□□□□□ -0.38
COL11A1-211ENST00000635193 PROSER3Q2NL68 480 aa12.7□□□□□ -0.38
COL11A1-211ENST00000635193 CCDC144BQ3MJ40 725 aa12.7□□□□□ -0.38
COL11A1-211ENST00000635193 FRMPD2Q68DX3 1309 aaPredicted RBP12.7□□□□□ -0.38
COL11A1-211ENST00000635193 NXNQ6DKJ4 435 aa12.7□□□□□ -0.38
COL11A1-211ENST00000635193 ANKRD35Q8N283 1001 aa12.7□□□□□ -0.38
COL11A1-211ENST00000635193 ZBTB38Q8NAP3 1195 aaPredicted RBP12.7□□□□□ -0.38
COL11A1-211ENST00000635193 RNF34Q969K3 372 aa12.7□□□□□ -0.38
COL11A1-211ENST00000635193 CCDC87Q9NVE4 849 aa12.7□□□□□ -0.38
COL11A1-211ENST00000635193 PCDHA13Q9Y5I0 950 aa12.7□□□□□ -0.38
COL11A1-211ENST00000635193 TRPA1O75762 1119 aa12.69□□□□□ -0.38
COL11A1-211ENST00000635193 CIAO1O76071 339 aa12.69□□□□□ -0.38
COL11A1-211ENST00000635193 EIF4A3P38919 411 aaKnown RBP12.69□□□□□ -0.38
COL11A1-211ENST00000635193 TMTC3Q6ZXV5 915 aa12.69□□□□□ -0.38
COL11A1-211ENST00000635193 MRPL46Q9H2W6 279 aaKnown RBP12.69□□□□□ -0.38
COL11A1-211ENST00000635193 THAP9Q9H5L6 903 aa12.69□□□□□ -0.38
COL11A1-211ENST00000635193 PCP11498 1178 aaKnown RBP12.69□□□□□ -0.38
COL11A1-211ENST00000635193 IRX1P78414 480 aaPredicted RBP12.69□□□□□ -0.38
COL11A1-211ENST00000635193 GNPTABQ3T906 1256 aa12.69□□□□□ -0.38
COL11A1-211ENST00000635193 CDAN1Q8IWY9 1227 aa12.69□□□□□ -0.38
COL11A1-211ENST00000635193 FAM178BQ8IXR5 827 aa12.69□□□□□ -0.38
COL11A1-211ENST00000635193 PBKQ96KB5 322 aa12.69□□□□□ -0.38
COL11A1-211ENST00000635193 AK8Q96MA6 479 aa12.69□□□□□ -0.38
COL11A1-211ENST00000635193 POC1B-GALNT4F8VUJ3 575 aa12.69□□□□□ -0.38
COL11A1-211ENST00000635193 CYP2C19P33261 490 aa12.69□□□□□ -0.38
COL11A1-211ENST00000635193 MESDQ14696 234 aa12.69□□□□□ -0.38
COL11A1-211ENST00000635193 CEP70Q8NHQ1 597 aa12.69□□□□□ -0.38
COL11A1-211ENST00000635193 PAGE5Q96GU1 130 aa12.69□□□□□ -0.38
COL11A1-211ENST00000635193 PGBD1Q96JS3 809 aa12.69□□□□□ -0.38
COL11A1-211ENST00000635193 PUS3Q9BZE2 481 aaKnown RBP12.69□□□□□ -0.38
COL11A1-211ENST00000635193 DRC3Q9H069 523 aa12.69□□□□□ -0.38
COL11A1-211ENST00000635193 PCDHA4Q9UN74 947 aa12.69□□□□□ -0.38
COL11A1-211ENST00000635193 KAT6BQ8WYB5 2073 aa12.69□□□□□ -0.38
COL11A1-211ENST00000635193 SH2B2O14492 632 aaPredicted RBP12.69□□□□□ -0.38
COL11A1-211ENST00000635193 PCCAP05165 728 aaPredicted RBP12.69□□□□□ -0.38
COL11A1-211ENST00000635193 MYL1P05976 194 aa12.69□□□□□ -0.38
COL11A1-211ENST00000635193 KRT19P08727 400 aa12.69□□□□□ -0.38
COL11A1-211ENST00000635193 PPM1FP49593 454 aaPredicted RBP12.69□□□□□ -0.38
COL11A1-211ENST00000635193 CYP27A1Q02318 531 aa12.69□□□□□ -0.38
COL11A1-211ENST00000635193 BSPRYQ5W0U4 402 aa12.69□□□□□ -0.38
COL11A1-211ENST00000635193 ZC3H18Q86VM9 953 aaKnown RBP12.69□□□□□ -0.38
COL11A1-211ENST00000635193 PPM1KQ8N3J5 372 aa12.69□□□□□ -0.38
COL11A1-211ENST00000635193 ZNF148Q9UQR1 794 aa12.69□□□□□ -0.38
COL11A1-211ENST00000635193 TTC37Q6PGP7 1564 aa12.69□□□□□ -0.38
COL11A1-211ENST00000635193 SAMD9Q5K651 1589 aa12.69□□□□□ -0.38
COL11A1-211ENST00000635193 USP27XA6NNY8 438 aa12.68□□□□□ -0.38
COL11A1-211ENST00000635193 K7ENM7 598 aa12.68□□□□□ -0.38
COL11A1-211ENST00000635193 LMNAP02545 664 aaKnown RBP12.68□□□□□ -0.38
COL11A1-211ENST00000635193 GYG1P46976 350 aa12.68□□□□□ -0.38
COL11A1-211ENST00000635193 TRAPPC3LQ5T215 181 aa12.68□□□□□ -0.38
COL11A1-211ENST00000635193 PARP9Q8IXQ6 854 aa12.68□□□□□ -0.38
COL11A1-211ENST00000635193 GJA10Q969M2 543 aa12.68□□□□□ -0.38
COL11A1-211ENST00000635193 OSBPL5Q9H0X9 879 aaPredicted RBP12.68□□□□□ -0.38
COL11A1-211ENST00000635193 PHKA1P46020 1223 aa12.68□□□□□ -0.38
COL11A1-211ENST00000635193 EIF3BP55884 814 aaKnown RBP12.68□□□□□ -0.38
COL11A1-211ENST00000635193 TADA3O75528 432 aa12.68□□□□□ -0.38
COL11A1-211ENST00000635193 NR2F2P24468 414 aa12.68□□□□□ -0.38
COL11A1-211ENST00000635193 BFSP1Q12934 665 aa12.68□□□□□ -0.38
COL11A1-211ENST00000635193 POLA2Q14181 598 aa12.68□□□□□ -0.38
COL11A1-211ENST00000635193 TCP11X2Q5H9J9 407 aa12.68□□□□□ -0.38
COL11A1-211ENST00000635193 NME8Q8N427 588 aa12.68□□□□□ -0.38
COL11A1-211ENST00000635193 C1orf112Q9NSG2 853 aa12.68□□□□□ -0.38
COL11A1-211ENST00000635193 PCDHB6Q9Y5E3 794 aa12.68□□□□□ -0.38
COL11A1-211ENST00000635193 PHKG2P15735 406 aa12.68□□□□□ -0.38
COL11A1-211ENST00000635193 ADCY1Q08828 1119 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms