RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 CUL4BQ13620 913 aa16.03■□□□□ 0.16
LIMS4-204ENST00000632897 DHX8Q14562 1220 aaKnown RBP16.03■□□□□ 0.16
LIMS4-204ENST00000632897 KCNB1Q14721 858 aa16.03■□□□□ 0.16
LIMS4-204ENST00000632897 USH1GQ495M9 461 aa16.03■□□□□ 0.16
LIMS4-204ENST00000632897 ZNF341Q9BYN7 854 aa16.03■□□□□ 0.16
LIMS4-204ENST00000632897 KIAA1683Q9H0B3 1180 aa16.03■□□□□ 0.16
LIMS4-204ENST00000632897 GPRC5DQ9NZD1 345 aa16.03■□□□□ 0.16
LIMS4-204ENST00000632897 STK17AQ9UEE5 414 aa16.03■□□□□ 0.16
LIMS4-204ENST00000632897 PPP2R3BQ9Y5P8 575 aa16.03■□□□□ 0.16
LIMS4-204ENST00000632897 ABCB11O95342 1321 aa16.02■□□□□ 0.16
LIMS4-204ENST00000632897 SREBF1P36956 1147 aa16.02■□□□□ 0.15
LIMS4-204ENST00000632897 ARHGAP4P98171 946 aa16.02■□□□□ 0.15
LIMS4-204ENST00000632897 FANCCQ00597 558 aa16.02■□□□□ 0.15
LIMS4-204ENST00000632897 AMPD3Q01432 767 aa16.02■□□□□ 0.15
LIMS4-204ENST00000632897 ZNF658Q5TYW1 1059 aaPredicted RBP16.02■□□□□ 0.15
LIMS4-204ENST00000632897 TRPM7Q96QT4 1865 aa16.02■□□□□ 0.15
LIMS4-204ENST00000632897 MMTAG2Q9BU76 263 aaKnown RBP16.02■□□□□ 0.15
LIMS4-204ENST00000632897 ADARB2Q9NS39 739 aaKnown RBP16.02■□□□□ 0.15
LIMS4-204ENST00000632897 IFNKQ9P0W0 207 aa16.02■□□□□ 0.15
LIMS4-204ENST00000632897 IMPACTQ9P2X3 320 aa16.02■□□□□ 0.15
LIMS4-204ENST00000632897 MRPL11Q9Y3B7 192 aaKnown RBP16.02■□□□□ 0.15
LIMS4-204ENST00000632897 ASTN2O75129 1339 aaPredicted RBP16.01■□□□□ 0.15
LIMS4-204ENST00000632897 DOCK1Q14185 1865 aa16.01■□□□□ 0.15
LIMS4-204ENST00000632897 TBX3O15119 743 aa16.01■□□□□ 0.15
LIMS4-204ENST00000632897 MARCH6O60337 910 aa16.01■□□□□ 0.15
LIMS4-204ENST00000632897 PTGS1P23219 599 aa16.01■□□□□ 0.15
LIMS4-204ENST00000632897 CASP1P29466 404 aa16.01■□□□□ 0.15
LIMS4-204ENST00000632897 FMR1Q06787 632 aaKnown RBP eCLIP16.01■□□□□ 0.15
LIMS4-204ENST00000632897 ZYXQ15942 572 aaKnown RBP16.01■□□□□ 0.15
LIMS4-204ENST00000632897 KRT79Q5XKE5 535 aa16.01■□□□□ 0.15
LIMS4-204ENST00000632897 MAP1SQ66K74 1059 aaPredicted RBP16.01■□□□□ 0.15
LIMS4-204ENST00000632897 CCDC186Q7Z3E2 898 aa16.01■□□□□ 0.15
LIMS4-204ENST00000632897 SLFN12Q8IYM2 578 aa16.01■□□□□ 0.15
LIMS4-204ENST00000632897 TNS4Q8IZW8 715 aa16.01■□□□□ 0.15
LIMS4-204ENST00000632897 STAMQ92783 540 aa16.01■□□□□ 0.15
LIMS4-204ENST00000632897 HAS1Q92839 578 aa16.01■□□□□ 0.15
LIMS4-204ENST00000632897 CCDC47Q96A33 483 aaKnown RBP16.01■□□□□ 0.15
LIMS4-204ENST00000632897 KIFC2Q96AC6 838 aa16.01■□□□□ 0.15
LIMS4-204ENST00000632897 GLIS2Q9BZE0 524 aaPredicted RBP16.01■□□□□ 0.15
LIMS4-204ENST00000632897 XPO4Q9C0E2 1151 aaKnown RBP16.01■□□□□ 0.15
LIMS4-204ENST00000632897 BLZF1Q9H2G9 400 aa16.01■□□□□ 0.15
LIMS4-204ENST00000632897 TTC12Q9H892 705 aaPredicted RBP16.01■□□□□ 0.15
LIMS4-204ENST00000632897 KCNMB3Q9NPA1 279 aa16.01■□□□□ 0.15
LIMS4-204ENST00000632897 RTN4Q9NQC3 1192 aaKnown RBP16.01■□□□□ 0.15
LIMS4-204ENST00000632897 FANCLQ9NW38 375 aa16.01■□□□□ 0.15
LIMS4-204ENST00000632897 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.01■□□□□ 0.15
LIMS4-204ENST00000632897 ZNF112Q9UJU3 913 aa16.01■□□□□ 0.15
LIMS4-204ENST00000632897 SYNRGQ9UMZ2 1314 aa16■□□□□ 0.15
LIMS4-204ENST00000632897 PPP1R3GB7ZBB8 358 aa16■□□□□ 0.15
LIMS4-204ENST00000632897 OPLAHO14841 1288 aa16■□□□□ 0.15
LIMS4-204ENST00000632897 CYP3A4P08684 503 aa16■□□□□ 0.15
LIMS4-204ENST00000632897 ZNF18P17022 549 aa16■□□□□ 0.15
LIMS4-204ENST00000632897 CIITAP33076 1130 aa16■□□□□ 0.15
LIMS4-204ENST00000632897 GSDMDP57764 484 aa16■□□□□ 0.15
LIMS4-204ENST00000632897 Q4G0T1 1027 aa16■□□□□ 0.15
LIMS4-204ENST00000632897 NBPF12Q5TAG4 269 aaPredicted RBP16■□□□□ 0.15
LIMS4-204ENST00000632897 SPATA1Q5VX52 437 aa16■□□□□ 0.15
LIMS4-204ENST00000632897 CDK5RAP3Q96JB5 506 aa16■□□□□ 0.15
LIMS4-204ENST00000632897 C7orf25Q9BPX7 421 aa16■□□□□ 0.15
LIMS4-204ENST00000632897 EHMT1Q9H9B1 1298 aa16■□□□□ 0.15
LIMS4-204ENST00000632897 PNMA2Q9UL42 364 aa16■□□□□ 0.15
LIMS4-204ENST00000632897 ABT1Q9ULW3 272 aaKnown RBP16■□□□□ 0.15
LIMS4-204ENST00000632897 NFE2L3Q9Y4A8 694 aa16■□□□□ 0.15
LIMS4-204ENST00000632897 STK24Q9Y6E0 443 aa16■□□□□ 0.15
LIMS4-204ENST00000632897 KDM3AQ9Y4C1 1321 aa16■□□□□ 0.15
LIMS4-204ENST00000632897 GCOM1H8Y6P7 765 aaPredicted RBP15.99■□□□□ 0.15
LIMS4-204ENST00000632897 SERPINC1P01008 464 aa15.99■□□□□ 0.15
LIMS4-204ENST00000632897 POLR2MP0CAP2 368 aa15.99■□□□□ 0.15
LIMS4-204ENST00000632897 ATP1A3P13637 1013 aa15.99■□□□□ 0.15
LIMS4-204ENST00000632897 HOXA7P31268 230 aaPredicted RBP15.99■□□□□ 0.15
LIMS4-204ENST00000632897 EPS15P42566 896 aa15.99■□□□□ 0.15
LIMS4-204ENST00000632897 USP14P54578 494 aa15.99■□□□□ 0.15
LIMS4-204ENST00000632897 GRB10Q13322 594 aa15.99■□□□□ 0.15
LIMS4-204ENST00000632897 TMEM119Q4V9L6 283 aa15.99■□□□□ 0.15
LIMS4-204ENST00000632897 COL13A1Q5TAT6 717 aaPredicted RBP15.99■□□□□ 0.15
LIMS4-204ENST00000632897 ANGEL2Q5VTE6 544 aaKnown RBP15.99■□□□□ 0.15
LIMS4-204ENST00000632897 WDR18Q9BV38 432 aa15.99■□□□□ 0.15
LIMS4-204ENST00000632897 LRRC27Q9C0I9 530 aa15.99■□□□□ 0.15
LIMS4-204ENST00000632897 KCNF1Q9H3M0 494 aa15.99■□□□□ 0.15
LIMS4-204ENST00000632897 PCDHA12Q9UN75 941 aa15.99■□□□□ 0.15
LIMS4-204ENST00000632897 SCAF8Q9UPN6 1271 aaKnown RBP15.99■□□□□ 0.15
LIMS4-204ENST00000632897 RASSF10A6NK89 507 aa15.98■□□□□ 0.15
LIMS4-204ENST00000632897 KLRC4O43908 158 aa15.98■□□□□ 0.15
LIMS4-204ENST00000632897 RHOBTB3O94955 611 aa15.98■□□□□ 0.15
LIMS4-204ENST00000632897 ICAM1P05362 532 aa15.98■□□□□ 0.15
LIMS4-204ENST00000632897 CD44P16070 742 aaKnown RBP15.98■□□□□ 0.15
LIMS4-204ENST00000632897 UBASH3AP57075 661 aa15.98■□□□□ 0.15
LIMS4-204ENST00000632897 DEFB115Q30KQ5 88 aa15.98■□□□□ 0.15
LIMS4-204ENST00000632897 HYIQ5T013 277 aa15.98■□□□□ 0.15
LIMS4-204ENST00000632897 CCDC174Q6PII3 467 aa15.98■□□□□ 0.15
LIMS4-204ENST00000632897 SCYL3Q8IZE3 742 aa15.98■□□□□ 0.15
LIMS4-204ENST00000632897 PRPF38AQ8NAV1 312 aaKnown RBP15.98■□□□□ 0.15
LIMS4-204ENST00000632897 TRPM4Q8TD43 1214 aa15.98■□□□□ 0.15
LIMS4-204ENST00000632897 SNX29Q8TEQ0 813 aa15.98■□□□□ 0.15
LIMS4-204ENST00000632897 LRRC15Q8TF66 581 aa15.98■□□□□ 0.15
LIMS4-204ENST00000632897 ZNF830Q96NB3 372 aaPredicted RBP15.98■□□□□ 0.15
LIMS4-204ENST00000632897 PNMA5Q96PV4 448 aa15.98■□□□□ 0.15
LIMS4-204ENST00000632897 P2RX7Q99572 595 aaKnown RBP15.98■□□□□ 0.15
LIMS4-204ENST00000632897 SLF1Q9BQI6 1058 aa15.98■□□□□ 0.15
LIMS4-204ENST00000632897 AS3MTQ9HBK9 375 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms