RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	TRIM32	Q13049	653 aa		29.84	■■■□□ 2.37
UBE3A-222	ENST00000630907	PXMP2	Q9NR77	195 aa		29.84	■■■□□ 2.37
UBE3A-222	ENST00000630907	KCNJ14	Q9UNX9	436 aa		29.84	■■■□□ 2.37
UBE3A-222	ENST00000630907	SMC3	Q9UQE7	1217 aa		29.84	■■■□□ 2.37
UBE3A-222	ENST00000630907	SPDYE3	A6NKU9	549 aa		29.83	■■■□□ 2.37
UBE3A-222	ENST00000630907	UBXN2A	P68543	259 aa		29.83	■■■□□ 2.37
UBE3A-222	ENST00000630907	GALNT17	Q6IS24	598 aa		29.83	■■■□□ 2.37
UBE3A-222	ENST00000630907	ARMCX2	Q7L311	632 aa		29.83	■■■□□ 2.37
UBE3A-222	ENST00000630907	GJB4	Q9NTQ9	266 aa		29.83	■■■□□ 2.37
UBE3A-222	ENST00000630907	LCT	P09848	1927 aa		29.83	■■■□□ 2.37
UBE3A-222	ENST00000630907	EIF2AK2	P19525	551 aa	Known RBP	29.82	■■■□□ 2.36
UBE3A-222	ENST00000630907	CLK2	P49760	499 aa	Known RBP	29.82	■■■□□ 2.36
UBE3A-222	ENST00000630907	FOSB	P53539	338 aa		29.82	■■■□□ 2.36
UBE3A-222	ENST00000630907	TRIM29	Q14134	588 aa		29.82	■■■□□ 2.36
UBE3A-222	ENST00000630907	REXO1	Q8N1G1	1221 aa	Known RBP	29.82	■■■□□ 2.36
UBE3A-222	ENST00000630907	MORC4	Q8TE76	937 aa		29.82	■■■□□ 2.36
UBE3A-222	ENST00000630907	ARMC5	Q96C12	935 aa		29.82	■■■□□ 2.36
UBE3A-222	ENST00000630907	IWS1	Q96ST2	819 aa		29.82	■■■□□ 2.36
UBE3A-222	ENST00000630907	PHF20	Q9BVI0	1012 aa		29.82	■■■□□ 2.36
UBE3A-222	ENST00000630907	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	29.82	■■■□□ 2.36
UBE3A-222	ENST00000630907	PCDHA6	Q9UN73	950 aa		29.82	■■■□□ 2.36
UBE3A-222	ENST00000630907	PCDHA4	Q9UN74	947 aa		29.82	■■■□□ 2.36
UBE3A-222	ENST00000630907	KIF3A	Q9Y496	699 aa		29.82	■■■□□ 2.36
UBE3A-222	ENST00000630907	PCDHA8	Q9Y5H6	950 aa		29.82	■■■□□ 2.36
UBE3A-222	ENST00000630907	SNAI1	O95863	264 aa	Predicted RBP	29.81	■■■□□ 2.36
UBE3A-222	ENST00000630907	FOS	P01100	380 aa	Predicted RBP	29.81	■■■□□ 2.36
UBE3A-222	ENST00000630907	CACNB2	Q08289	660 aa	Predicted RBP	29.81	■■■□□ 2.36
UBE3A-222	ENST00000630907	AP3B2	Q13367	1082 aa		29.81	■■■□□ 2.36
UBE3A-222	ENST00000630907	DAGLB	Q8NCG7	672 aa		29.81	■■■□□ 2.36
UBE3A-222	ENST00000630907	CNPY2	Q9Y2B0	182 aa		29.81	■■■□□ 2.36
UBE3A-222	ENST00000630907	DDX49	Q9Y6V7	483 aa	Known RBP	29.81	■■■□□ 2.36
UBE3A-222	ENST00000630907	ADAMTS3	O15072	1205 aa		29.8	■■■□□ 2.36
UBE3A-222	ENST00000630907	PRKAR2A	P13861	404 aa	Known RBP	29.8	■■■□□ 2.36
UBE3A-222	ENST00000630907	EDNRB	P24530	442 aa		29.8	■■■□□ 2.36
UBE3A-222	ENST00000630907	GJB2	P29033	226 aa		29.8	■■■□□ 2.36
UBE3A-222	ENST00000630907	PDE4D	Q08499	809 aa		29.8	■■■□□ 2.36
UBE3A-222	ENST00000630907	JAKMIP3	Q5VZ66	844 aa		29.8	■■■□□ 2.36
UBE3A-222	ENST00000630907	MCTP2	Q6DN12	878 aa		29.8	■■■□□ 2.36
UBE3A-222	ENST00000630907	BLID	Q8IZY5	108 aa		29.8	■■■□□ 2.36
UBE3A-222	ENST00000630907	INTS4	Q96HW7	963 aa	Known RBP	29.8	■■■□□ 2.36
UBE3A-222	ENST00000630907	C8orf76	Q96K31	380 aa		29.8	■■■□□ 2.36
UBE3A-222	ENST00000630907	PDCD2L	Q9BRP1	358 aa		29.8	■■■□□ 2.36
UBE3A-222	ENST00000630907	TMEM260	Q9NX78	707 aa		29.8	■■■□□ 2.36
UBE3A-222	ENST00000630907	RPTOR	Q8N122	1335 aa		29.79	■■■□□ 2.36
UBE3A-222	ENST00000630907	NR3C2	P08235	984 aa		29.79	■■■□□ 2.36
UBE3A-222	ENST00000630907	PRAMEF19	Q5SWL8	479 aa		29.79	■■■□□ 2.36
UBE3A-222	ENST00000630907	MAP3K21	Q5TCX8	1036 aa		29.79	■■■□□ 2.36
UBE3A-222	ENST00000630907	EHMT1	Q9H9B1	1298 aa		29.79	■■■□□ 2.36
UBE3A-222	ENST00000630907	NRBP1	Q9UHY1	535 aa		29.79	■■■□□ 2.36
UBE3A-222	ENST00000630907	FRMPD4	Q14CM0	1322 aa		29.78	■■■□□ 2.36
UBE3A-222	ENST00000630907	PGM5	Q15124	567 aa		29.78	■■■□□ 2.36
UBE3A-222	ENST00000630907	NPY5R	Q15761	445 aa		29.78	■■■□□ 2.36
UBE3A-222	ENST00000630907	KRT40	Q6A162	431 aa		29.78	■■■□□ 2.36
UBE3A-222	ENST00000630907	ZNF333	Q96JL9	665 aa		29.78	■■■□□ 2.36
UBE3A-222	ENST00000630907	ABHD16B	Q9H3Z7	469 aa		29.78	■■■□□ 2.36
UBE3A-222	ENST00000630907	MYCL	P12524	364 aa	Predicted RBP	29.77	■■■□□ 2.36
UBE3A-222	ENST00000630907	STXBP2	Q15833	593 aa		29.77	■■■□□ 2.36
UBE3A-222	ENST00000630907	RASGRP4	Q8TDF6	673 aa		29.77	■■■□□ 2.36
UBE3A-222	ENST00000630907	PGBD1	Q96JS3	809 aa		29.77	■■■□□ 2.36
UBE3A-222	ENST00000630907	ANO3	Q9BYT9	981 aa		29.77	■■■□□ 2.36
UBE3A-222	ENST00000630907	CYBA	P13498	195 aa		29.76	■■■□□ 2.35
UBE3A-222	ENST00000630907	CCND2	P30279	289 aa		29.76	■■■□□ 2.35
UBE3A-222	ENST00000630907	ACVR2B	Q13705	512 aa		29.76	■■■□□ 2.35
UBE3A-222	ENST00000630907	EEPD1	Q7L9B9	569 aa		29.76	■■■□□ 2.35
UBE3A-222	ENST00000630907	VSIG10L	Q86VR7	867 aa		29.76	■■■□□ 2.35
UBE3A-222	ENST00000630907	TRPV1	Q8NER1	839 aa		29.76	■■■□□ 2.35
UBE3A-222	ENST00000630907	IL31RA	Q8NI17	732 aa		29.76	■■■□□ 2.35
UBE3A-222	ENST00000630907	BRMS1	Q9HCU9	246 aa		29.76	■■■□□ 2.35
UBE3A-222	ENST00000630907	HMX1	Q9NP08	348 aa	Predicted RBP	29.76	■■■□□ 2.35
UBE3A-222	ENST00000630907	ZHX1	Q9UKY1	873 aa	Predicted RBP	29.76	■■■□□ 2.35
UBE3A-222	ENST00000630907	MYC	P01106	439 aa	Predicted RBP	29.75	■■■□□ 2.35
UBE3A-222	ENST00000630907	MMP1	P03956	469 aa		29.75	■■■□□ 2.35
UBE3A-222	ENST00000630907	ZNF865	P0CJ78	1059 aa	Predicted RBP	29.75	■■■□□ 2.35
UBE3A-222	ENST00000630907	KRT2	P35908	639 aa		29.75	■■■□□ 2.35
UBE3A-222	ENST00000630907	GUCY1B3	Q02153	619 aa		29.75	■■■□□ 2.35
UBE3A-222	ENST00000630907	FBXO18	Q8NFZ0	1043 aa		29.75	■■■□□ 2.35
UBE3A-222	ENST00000630907	KATNBL1	Q9H079	304 aa		29.75	■■■□□ 2.35
UBE3A-222	ENST00000630907	VTA1	Q9NP79	307 aa		29.75	■■■□□ 2.35
UBE3A-222	ENST00000630907	FOXD4L1	Q9NU39	408 aa		29.75	■■■□□ 2.35
UBE3A-222	ENST00000630907		M0R2N6	131 aa		29.74	■■■□□ 2.35
UBE3A-222	ENST00000630907	EIF3J	O75822	258 aa	Known RBP	29.74	■■■□□ 2.35
UBE3A-222	ENST00000630907	CCND3	P30281	292 aa	Predicted RBP	29.74	■■■□□ 2.35
UBE3A-222	ENST00000630907	MTFR1	Q15390	333 aa		29.74	■■■□□ 2.35
UBE3A-222	ENST00000630907	XRRA1	Q6P2D8	792 aa		29.74	■■■□□ 2.35
UBE3A-222	ENST00000630907	FBXO16	Q8IX29	292 aa	Predicted RBP	29.74	■■■□□ 2.35
UBE3A-222	ENST00000630907	UNC93B1	Q9H1C4	597 aa		29.74	■■■□□ 2.35
UBE3A-222	ENST00000630907	HSP90AA1	P07900	732 aa	Known RBP	29.73	■■■□□ 2.35
UBE3A-222	ENST00000630907	CCL5	P13501	91 aa		29.73	■■■□□ 2.35
UBE3A-222	ENST00000630907	CNGA1	P29973	690 aa		29.73	■■■□□ 2.35
UBE3A-222	ENST00000630907	BECN1	Q14457	450 aa		29.73	■■■□□ 2.35
UBE3A-222	ENST00000630907	SAFB	Q15424	915 aa	Known RBP eCLIP	29.73	■■■□□ 2.35
UBE3A-222	ENST00000630907	PCNX4	Q63HM2	1172 aa		29.73	■■■□□ 2.35
UBE3A-222	ENST00000630907	TNS4	Q8IZW8	715 aa		29.73	■■■□□ 2.35
UBE3A-222	ENST00000630907	OXER1	Q8TDS5	423 aa		29.73	■■■□□ 2.35
UBE3A-222	ENST00000630907	SREBF1	P36956	1147 aa		29.72	■■■□□ 2.35
UBE3A-222	ENST00000630907	DIS3L2	Q8IYB7	885 aa	Known RBP	29.72	■■■□□ 2.35
UBE3A-222	ENST00000630907	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	29.72	■■■□□ 2.35	3e-16	■■■□□ 18.7
UBE3A-222	ENST00000630907	MCM3AP	O60318	1980 aa		29.72	■■■□□ 2.35
UBE3A-222	ENST00000630907	TAPT1	Q6NXT6	567 aa		29.71	■■■□□ 2.35
UBE3A-222	ENST00000630907	KRT25	Q7Z3Z0	450 aa		29.71	■■■□□ 2.35

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms