RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 TRMT44Q8IYL2 757 aaKnown RBP21.58■■□□□ 1.05
MECP2-216ENST00000627864 REXO1Q8N1G1 1221 aaKnown RBP21.58■■□□□ 1.05
MECP2-216ENST00000627864 NSUN6Q8TEA1 469 aaKnown RBP21.58■■□□□ 1.05
MECP2-216ENST00000627864 PCDHA6Q9UN73 950 aa21.58■■□□□ 1.05
MECP2-216ENST00000627864 PCDHA8Q9Y5H6 950 aa21.58■■□□□ 1.05
MECP2-216ENST00000627864 ASTN1O14525 1302 aa21.57■■□□□ 1.04
MECP2-216ENST00000627864 SPDYE3A6NKU9 549 aa21.57■■□□□ 1.04
MECP2-216ENST00000627864 EIF2AK2P19525 551 aaKnown RBP21.57■■□□□ 1.04
MECP2-216ENST00000627864 ANP32AP39687 249 aaKnown RBP21.57■■□□□ 1.04
MECP2-216ENST00000627864 CLK2P49760 499 aaKnown RBP21.57■■□□□ 1.04
MECP2-216ENST00000627864 UBXN2AP68543 259 aa21.57■■□□□ 1.04
MECP2-216ENST00000627864 OLFML2BQ68BL8 750 aa21.57■■□□□ 1.04
MECP2-216ENST00000627864 FBXO46Q6PJ61 603 aaPredicted RBP21.57■■□□□ 1.04
MECP2-216ENST00000627864 DAGLBQ8NCG7 672 aa21.57■■□□□ 1.04
MECP2-216ENST00000627864 RASGRP4Q8TDF6 673 aa21.57■■□□□ 1.04
MECP2-216ENST00000627864 PXYLP1Q8TE99 480 aa21.57■■□□□ 1.04
MECP2-216ENST00000627864 TRIB2Q92519 343 aa21.57■■□□□ 1.04
MECP2-216ENST00000627864 PGBD1Q96JS3 809 aa21.57■■□□□ 1.04
MECP2-216ENST00000627864 TINF2Q9BSI4 451 aa21.57■■□□□ 1.04
MECP2-216ENST00000627864 PXMP2Q9NR77 195 aa21.57■■□□□ 1.04
MECP2-216ENST00000627864 DDX49Q9Y6V7 483 aaKnown RBP21.57■■□□□ 1.04
MECP2-216ENST00000627864 LRRC37A2A6NM11 1700 aa21.57■■□□□ 1.04
MECP2-216ENST00000627864 ASB14A6NK59 587 aa21.56■■□□□ 1.04
MECP2-216ENST00000627864 B4DLN1 442 aa21.56■■□□□ 1.04
MECP2-216ENST00000627864 FOSP01100 380 aaPredicted RBP21.56■■□□□ 1.04
MECP2-216ENST00000627864 MMP1P03956 469 aa21.56■■□□□ 1.04
MECP2-216ENST00000627864 GRK4P32298 578 aa21.56■■□□□ 1.04
MECP2-216ENST00000627864 NPY5RQ15761 445 aa21.56■■□□□ 1.04
MECP2-216ENST00000627864 LARP1BQ659C4 914 aaKnown RBP21.56■■□□□ 1.04
MECP2-216ENST00000627864 SLAIN1Q8ND83 568 aa21.56■■□□□ 1.04
MECP2-216ENST00000627864 FBXO18Q8NFZ0 1043 aa21.56■■□□□ 1.04
MECP2-216ENST00000627864 MPHOSPH6Q99547 160 aaKnown RBP21.56■■□□□ 1.04
MECP2-216ENST00000627864 BRMS1Q9HCU9 246 aa21.56■■□□□ 1.04
MECP2-216ENST00000627864 CYP2C19P33261 490 aa21.55■■□□□ 1.04
MECP2-216ENST00000627864 KRT2P35908 639 aa21.55■■□□□ 1.04
MECP2-216ENST00000627864 AP3B2Q13367 1082 aa21.55■■□□□ 1.04
MECP2-216ENST00000627864 SAFBQ15424 915 aaKnown RBP eCLIP21.55■■□□□ 1.04
MECP2-216ENST00000627864 MFSD14CQ5VZR4 134 aa21.55■■□□□ 1.04
MECP2-216ENST00000627864 MCTP2Q6DN12 878 aa21.55■■□□□ 1.04
MECP2-216ENST00000627864 MAMDC4Q6UXC1 1216 aa21.55■■□□□ 1.04
MECP2-216ENST00000627864 ARMCX2Q7L311 632 aa21.55■■□□□ 1.04
MECP2-216ENST00000627864 OXER1Q8TDS5 423 aa21.55■■□□□ 1.04
MECP2-216ENST00000627864 ANO3Q9BYT9 981 aa21.55■■□□□ 1.04
MECP2-216ENST00000627864 EHMT1Q9H9B1 1298 aa21.55■■□□□ 1.04
MECP2-216ENST00000627864 H3BQV1 296 aa21.54■■□□□ 1.04
MECP2-216ENST00000627864 NR3C2P08235 984 aa21.54■■□□□ 1.04
MECP2-216ENST00000627864 MYCLP12524 364 aaPredicted RBP21.54■■□□□ 1.04
MECP2-216ENST00000627864 PDE4DQ08499 809 aa21.54■■□□□ 1.04
MECP2-216ENST00000627864 TRIM32Q13049 653 aa21.54■■□□□ 1.04
MECP2-216ENST00000627864 PGM5Q15124 567 aa21.54■■□□□ 1.04
MECP2-216ENST00000627864 IFFO2Q5TF58 517 aa21.54■■□□□ 1.04
MECP2-216ENST00000627864 MSL3Q8N5Y2 521 aaKnown RBP21.54■■□□□ 1.04
MECP2-216ENST00000627864 SH3TC2Q8TF17 1288 aa21.54■■□□□ 1.04
MECP2-216ENST00000627864 IWS1Q96ST2 819 aa21.54■■□□□ 1.04
MECP2-216ENST00000627864 PDCD2LQ9BRP1 358 aa21.54■■□□□ 1.04
MECP2-216ENST00000627864 LOC102724159A0A0B4J2E5 919 aa21.53■■□□□ 1.04
MECP2-216ENST00000627864 SNAI1O95863 264 aaPredicted RBP21.53■■□□□ 1.04
MECP2-216ENST00000627864 HMGCRP04035 888 aa21.53■■□□□ 1.04
MECP2-216ENST00000627864 PWP2Q15269 919 aaKnown RBP21.53■■□□□ 1.04
MECP2-216ENST00000627864 SLC9C1Q4G0N8 1177 aa21.53■■□□□ 1.04
MECP2-216ENST00000627864 DIS3L2Q8IYB7 885 aaKnown RBP21.53■■□□□ 1.04
MECP2-216ENST00000627864 IL31RAQ8NI17 732 aa21.53■■□□□ 1.04
MECP2-216ENST00000627864 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.53■■□□□ 1.04
MECP2-216ENST00000627864 RBM19Q9Y4C8 960 aaKnown RBP21.53■■□□□ 1.04
MECP2-216ENST00000627864 RPTORQ8N122 1335 aa21.53■■□□□ 1.04
MECP2-216ENST00000627864 SYNGAP1Q96PV0 1343 aa21.53■■□□□ 1.04
MECP2-216ENST00000627864 BTBD18B2RXH4 712 aa21.52■■□□□ 1.04
MECP2-216ENST00000627864 M0R2N6 131 aa21.52■■□□□ 1.04
MECP2-216ENST00000627864 IGHA2P01877 340 aa21.52■■□□□ 1.04
MECP2-216ENST00000627864 PDCP20941 246 aa21.52■■□□□ 1.04
MECP2-216ENST00000627864 NR5A1Q13285 461 aa21.52■■□□□ 1.04
MECP2-216ENST00000627864 PRAMEF19Q5SWL8 479 aa21.52■■□□□ 1.04
MECP2-216ENST00000627864 EEPD1Q7L9B9 569 aa21.52■■□□□ 1.04
MECP2-216ENST00000627864 MORC4Q8TE76 937 aa21.52■■□□□ 1.04
MECP2-216ENST00000627864 ZFP91Q96JP5 570 aaPredicted RBP21.52■■□□□ 1.04
MECP2-216ENST00000627864 MCOLN1Q9GZU1 580 aa21.52■■□□□ 1.04
MECP2-216ENST00000627864 FRMPD4Q14CM0 1322 aa21.52■■□□□ 1.03
MECP2-216ENST00000627864 CCDC194A0A1B0GVG4 234 aa21.51■■□□□ 1.03
MECP2-216ENST00000627864 INHAP05111 366 aa21.51■■□□□ 1.03
MECP2-216ENST00000627864 EDNRBP24530 442 aa21.51■■□□□ 1.03
MECP2-216ENST00000627864 CCND2P30279 289 aa21.51■■□□□ 1.03
MECP2-216ENST00000627864 CACNB2Q08289 660 aaPredicted RBP21.51■■□□□ 1.03
MECP2-216ENST00000627864 GNL2Q13823 731 aaKnown RBP21.51■■□□□ 1.03
MECP2-216ENST00000627864 STXBP2Q15833 593 aa21.51■■□□□ 1.03
MECP2-216ENST00000627864 KRT25Q7Z3Z0 450 aa21.51■■□□□ 1.03
MECP2-216ENST00000627864 CNPY2Q9Y2B0 182 aa21.51■■□□□ 1.03
MECP2-216ENST00000627864 SYT1P21579 422 aa21.5■■□□□ 1.03
MECP2-216ENST00000627864 NONOQ15233 471 aaKnown RBP eCLIP21.5■■□□□ 1.031e-6■■□□□ 13.9
MECP2-216ENST00000627864 MCTP1Q6DN14 999 aa21.5■■□□□ 1.03
MECP2-216ENST00000627864 VSIG10LQ86VR7 867 aa21.5■■□□□ 1.03
MECP2-216ENST00000627864 DOCK5Q9H7D0 1870 aa21.49■■□□□ 1.03
MECP2-216ENST00000627864 VPS37CA5D8V6 355 aaPredicted RBP21.49■■□□□ 1.03
MECP2-216ENST00000627864 PRKAR2AP13861 404 aaKnown RBP21.49■■□□□ 1.03
MECP2-216ENST00000627864 SREBF1P36956 1147 aa21.49■■□□□ 1.03
MECP2-216ENST00000627864 ARHGAP4P98171 946 aa21.49■■□□□ 1.03
MECP2-216ENST00000627864 ACVR2BQ13705 512 aa21.49■■□□□ 1.03
MECP2-216ENST00000627864 PCNX4Q63HM2 1172 aa21.49■■□□□ 1.03
MECP2-216ENST00000627864 PIK3AP1Q6ZUJ8 805 aa21.49■■□□□ 1.03
MECP2-216ENST00000627864 TNFRSF25Q93038 417 aa21.49■■□□□ 1.03
MECP2-216ENST00000627864 ABHD16BQ9H3Z7 469 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms