RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 CDC37Q16543 378 aaPredicted RBP16.95■□□□□ 0.3
TUBB3-215ENST00000625617 NFRKBQ6P4R8 1299 aa16.95■□□□□ 0.3
TUBB3-215ENST00000625617 DEFB128Q7Z7B8 93 aa16.95■□□□□ 0.3
TUBB3-215ENST00000625617 DGKHQ86XP1 1220 aa16.95■□□□□ 0.3
TUBB3-215ENST00000625617 PNMA1Q8ND90 353 aa16.95■□□□□ 0.3
TUBB3-215ENST00000625617 COPS5Q92905 334 aa16.95■□□□□ 0.3
TUBB3-215ENST00000625617 VWCEQ96DN2 955 aa16.95■□□□□ 0.3
TUBB3-215ENST00000625617 CPVLQ9H3G5 476 aa16.95■□□□□ 0.3
TUBB3-215ENST00000625617 PITPNM1O00562 1244 aa16.94■□□□□ 0.3
TUBB3-215ENST00000625617 ACTN1P12814 892 aa16.94■□□□□ 0.3
TUBB3-215ENST00000625617 RFC2P35250 354 aa16.94■□□□□ 0.3
TUBB3-215ENST00000625617 AAMPQ13685 434 aa16.94■□□□□ 0.3
TUBB3-215ENST00000625617 CCDC85BQ15834 202 aaPredicted RBP16.94■□□□□ 0.3
TUBB3-215ENST00000625617 CCDC178Q5BJE1 867 aa16.94■□□□□ 0.3
TUBB3-215ENST00000625617 SMC5Q8IY18 1101 aa16.94■□□□□ 0.3
TUBB3-215ENST00000625617 RGS22Q8NE09 1264 aa16.94■□□□□ 0.3
TUBB3-215ENST00000625617 UBA5Q9GZZ9 404 aa16.94■□□□□ 0.3
TUBB3-215ENST00000625617 KAT14Q9H8E8 782 aa16.94■□□□□ 0.3
TUBB3-215ENST00000625617 DIAPH3Q9NSV4 1193 aa16.94■□□□□ 0.3
TUBB3-215ENST00000625617 NOD1Q9Y239 953 aa16.94■□□□□ 0.3
TUBB3-215ENST00000625617 ABCB11O95342 1321 aa16.94■□□□□ 0.3
TUBB3-215ENST00000625617 SPTBN5Q9NRC6 3674 aaKnown RBP16.93■□□□□ 0.3
TUBB3-215ENST00000625617 KDM4AO75164 1064 aa16.93■□□□□ 0.3
TUBB3-215ENST00000625617 ARIH2O95376 493 aa16.93■□□□□ 0.3
TUBB3-215ENST00000625617 MYOGP15173 224 aa16.93■□□□□ 0.3
TUBB3-215ENST00000625617 PTPN11Q06124 597 aaPredicted RBP16.93■□□□□ 0.3
TUBB3-215ENST00000625617 ASPRV1Q53RT3 343 aa16.93■□□□□ 0.3
TUBB3-215ENST00000625617 B4GALNT3Q6L9W6 998 aa16.93■□□□□ 0.3
TUBB3-215ENST00000625617 RETREG2Q8NC44 543 aa16.93■□□□□ 0.3
TUBB3-215ENST00000625617 PPP1R13LQ8WUF5 828 aa16.93■□□□□ 0.3
TUBB3-215ENST00000625617 MAF1Q9H063 256 aa16.93■□□□□ 0.3
TUBB3-215ENST00000625617 B4E1Z4 1266 aa16.92■□□□□ 0.3
TUBB3-215ENST00000625617 TNFRSF10AO00220 468 aa16.92■□□□□ 0.3
TUBB3-215ENST00000625617 DHX16O60231 1041 aaKnown RBP16.92■□□□□ 0.3
TUBB3-215ENST00000625617 CHMP4BP1P59074 171 aa16.92■□□□□ 0.3
TUBB3-215ENST00000625617 BFSP2Q13515 415 aa16.92■□□□□ 0.3
TUBB3-215ENST00000625617 TMEM67Q5HYA8 995 aa16.92■□□□□ 0.3
TUBB3-215ENST00000625617 CWC27Q6UX04 472 aaKnown RBP16.92■□□□□ 0.3
TUBB3-215ENST00000625617 CHD1LQ86WJ1 897 aa16.92■□□□□ 0.3
TUBB3-215ENST00000625617 MICALL1Q8N3F8 863 aa16.92■□□□□ 0.3
TUBB3-215ENST00000625617 IL27Q8NEV9 243 aa16.92■□□□□ 0.3
TUBB3-215ENST00000625617 SYTL5Q8TDW5 730 aaPredicted RBP16.92■□□□□ 0.3
TUBB3-215ENST00000625617 NSUN6Q8TEA1 469 aaKnown RBP16.92■□□□□ 0.3
TUBB3-215ENST00000625617 ASB2Q96Q27 587 aa16.92■□□□□ 0.3
TUBB3-215ENST00000625617 SLC9A7Q96T83 725 aa16.92■□□□□ 0.3
TUBB3-215ENST00000625617 RWDD1Q9H446 243 aaPredicted RBP16.92■□□□□ 0.3
TUBB3-215ENST00000625617 HIP1O00291 1037 aa16.91■□□□□ 0.3
TUBB3-215ENST00000625617 GH1P01241 217 aa16.91■□□□□ 0.3
TUBB3-215ENST00000625617 CA3P07451 260 aa16.91■□□□□ 0.3
TUBB3-215ENST00000625617 IQCF3P0C7M6 154 aa16.91■□□□□ 0.3
TUBB3-215ENST00000625617 MRPS5P82675 430 aaKnown RBP16.91■□□□□ 0.3
TUBB3-215ENST00000625617 CCDC62Q6P9F0 684 aa16.91■□□□□ 0.3
TUBB3-215ENST00000625617 SEPT14Q6ZU15 432 aa16.91■□□□□ 0.3
TUBB3-215ENST00000625617 MCF2L2Q86YR7 1114 aa16.91■□□□□ 0.3
TUBB3-215ENST00000625617 PLEKHM2Q8IWE5 1019 aa16.91■□□□□ 0.3
TUBB3-215ENST00000625617 ADGRF4Q8IZF3 695 aa16.91■□□□□ 0.3
TUBB3-215ENST00000625617 ENAHQ8N8S7 591 aaPredicted RBP16.91■□□□□ 0.3
TUBB3-215ENST00000625617 AFG1LQ8WV93 481 aa16.91■□□□□ 0.3
TUBB3-215ENST00000625617 ZSCAN10Q96SZ4 725 aaPredicted RBP16.91■□□□□ 0.3
TUBB3-215ENST00000625617 FTOQ9C0B1 505 aaKnown RBP eCLIP16.91■□□□□ 0.3
TUBB3-215ENST00000625617 OSBPL3Q9H4L5 887 aa16.91■□□□□ 0.3
TUBB3-215ENST00000625617 SCN10AQ9Y5Y9 1956 aa16.9■□□□□ 0.3
TUBB3-215ENST00000625617 MMP3P08254 477 aa16.9■□□□□ 0.3
TUBB3-215ENST00000625617 PARP1P09874 1014 aaKnown RBP16.9■□□□□ 0.3
TUBB3-215ENST00000625617 ARHGAP1Q07960 439 aa16.9■□□□□ 0.3
TUBB3-215ENST00000625617 IMMTQ16891 758 aaKnown RBP16.9■□□□□ 0.3
TUBB3-215ENST00000625617 QRICH1Q2TAL8 776 aa16.9■□□□□ 0.3
TUBB3-215ENST00000625617 CCDC155Q8N6L0 562 aa16.9■□□□□ 0.3
TUBB3-215ENST00000625617 ADAMTS19Q8TE59 1207 aa16.9■□□□□ 0.3
TUBB3-215ENST00000625617 ANKS1AQ92625 1134 aa16.9■□□□□ 0.3
TUBB3-215ENST00000625617 TAAR1Q96RJ0 339 aa16.9■□□□□ 0.3
TUBB3-215ENST00000625617 RMDN3Q96TC7 470 aa16.9■□□□□ 0.3
TUBB3-215ENST00000625617 UBAC1Q9BSL1 405 aa16.9■□□□□ 0.3
TUBB3-215ENST00000625617 DSCC1Q9BVC3 393 aa16.9■□□□□ 0.3
TUBB3-215ENST00000625617 TSPYL2Q9H2G4 693 aaPredicted RBP16.9■□□□□ 0.3
TUBB3-215ENST00000625617 COL20A1Q9P218 1284 aa16.9■□□□□ 0.3
TUBB3-215ENST00000625617 MRPL11Q9Y3B7 192 aaKnown RBP16.9■□□□□ 0.3
TUBB3-215ENST00000625617 CHD9Q3L8U1 2897 aa16.89■□□□□ 0.29
TUBB3-215ENST00000625617 NUCB1Q02818 461 aa16.89■□□□□ 0.29
TUBB3-215ENST00000625617 STXBP2Q15833 593 aa16.89■□□□□ 0.29
TUBB3-215ENST00000625617 PTGISQ16647 500 aa16.89■□□□□ 0.29
TUBB3-215ENST00000625617 LY6KQ17RY6 165 aa16.89■□□□□ 0.29
TUBB3-215ENST00000625617 FBXO11Q86XK2 927 aa16.89■□□□□ 0.29
TUBB3-215ENST00000625617 CAGE1Q8TC20 777 aa16.89■□□□□ 0.29
TUBB3-215ENST00000625617 PHOSPHO2Q8TCD6 241 aa16.89■□□□□ 0.29
TUBB3-215ENST00000625617 TBC1D5Q92609 795 aa16.89■□□□□ 0.29
TUBB3-215ENST00000625617 IWS1Q96ST2 819 aa16.89■□□□□ 0.29
TUBB3-215ENST00000625617 LAMA4Q16363 1823 aa16.89■□□□□ 0.29
TUBB3-215ENST00000625617 GTPBP6O43824 516 aaPredicted RBP16.88■□□□□ 0.29
TUBB3-215ENST00000625617 BAIAP3O94812 1187 aa16.88■□□□□ 0.29
TUBB3-215ENST00000625617 EIF2AK2P19525 551 aaKnown RBP16.88■□□□□ 0.29
TUBB3-215ENST00000625617 ARHGEF16Q5VV41 709 aa16.88■□□□□ 0.29
TUBB3-215ENST00000625617 CHST3Q7LGC8 479 aa16.88■□□□□ 0.29
TUBB3-215ENST00000625617 SESTD1Q86VW0 696 aa16.88■□□□□ 0.29
TUBB3-215ENST00000625617 AFAP1L1Q8TED9 768 aa16.88■□□□□ 0.29
TUBB3-215ENST00000625617 UHRF1Q96T88 793 aaPredicted RBP16.88■□□□□ 0.29
TUBB3-215ENST00000625617 KRT23Q9C075 422 aa16.88■□□□□ 0.29
TUBB3-215ENST00000625617 CNNM2Q9H8M5 875 aa16.88■□□□□ 0.29
TUBB3-215ENST00000625617 CTNNA3Q9UI47 895 aa16.88■□□□□ 0.29
TUBB3-215ENST00000625617 TANC1Q9C0D5 1861 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms