RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 NFRKBQ6P4R8 1299 aa17.33■□□□□ 0.36
PNKP-218ENST00000625299 RNF207Q6ZRF8 634 aa17.33■□□□□ 0.36
PNKP-218ENST00000625299 TMCO2Q7Z6W1 182 aaPredicted RBP17.33■□□□□ 0.36
PNKP-218ENST00000625299 GDPD5Q8WTR4 605 aa17.33■□□□□ 0.36
PNKP-218ENST00000625299 MPHOSPH6Q99547 160 aaKnown RBP17.33■□□□□ 0.36
PNKP-218ENST00000625299 LCHNA4D1U4 455 aa17.32■□□□□ 0.36
PNKP-218ENST00000625299 FAM86C2PA6NEL3 165 aa17.32■□□□□ 0.36
PNKP-218ENST00000625299 ZMYM1Q5SVZ6 1142 aa17.32■□□□□ 0.36
PNKP-218ENST00000625299 SCFD2Q8WU76 684 aa17.32■□□□□ 0.36
PNKP-218ENST00000625299 ZBED2Q9BTP6 218 aa17.32■□□□□ 0.36
PNKP-218ENST00000625299 LOC102724159A0A0B4J2E5 919 aa17.31■□□□□ 0.36
PNKP-218ENST00000625299 NKRFO15226 690 aaKnown RBP eCLIP17.31■□□□□ 0.36
PNKP-218ENST00000625299 KPNA6O60684 536 aa17.31■□□□□ 0.36
PNKP-218ENST00000625299 BAIAP3O94812 1187 aa17.31■□□□□ 0.36
PNKP-218ENST00000625299 TXNP10599 105 aaKnown RBP17.31■□□□□ 0.36
PNKP-218ENST00000625299 PWP2Q15269 919 aaKnown RBP17.31■□□□□ 0.36
PNKP-218ENST00000625299 PTGISQ16647 500 aa17.31■□□□□ 0.36
PNKP-218ENST00000625299 RRP12Q5JTH9 1297 aaKnown RBP17.31■□□□□ 0.36
PNKP-218ENST00000625299 MIER1Q8N108 512 aa17.31■□□□□ 0.36
PNKP-218ENST00000625299 CCDC155Q8N6L0 562 aa17.31■□□□□ 0.36
PNKP-218ENST00000625299 DCTPP1Q9H773 170 aa17.31■□□□□ 0.36
PNKP-218ENST00000625299 RCAN3Q9UKA8 241 aa17.31■□□□□ 0.36
PNKP-218ENST00000625299 MTUS1Q9ULD2 1270 aa17.31■□□□□ 0.36
PNKP-218ENST00000625299 TTC41PQ6P2S7 1318 aa17.3■□□□□ 0.36
PNKP-218ENST00000625299 A6NJR5 290 aa17.3■□□□□ 0.36
PNKP-218ENST00000625299 FOXP2O15409 715 aa17.3■□□□□ 0.36
PNKP-218ENST00000625299 WDR5P61964 334 aaKnown RBP17.3■□□□□ 0.36
PNKP-218ENST00000625299 RPS6P62753 249 aaKnown RBP17.3■□□□□ 0.36
PNKP-218ENST00000625299 PTPN11Q06124 597 aaPredicted RBP17.3■□□□□ 0.36
PNKP-218ENST00000625299 CLEC4DQ8WXI8 215 aa17.3■□□□□ 0.36
PNKP-218ENST00000625299 KHSRPQ92945 711 aaKnown RBP eCLIP17.3■□□□□ 0.36
PNKP-218ENST00000625299 BRWD1Q9NSI6 2320 aa17.3■□□□□ 0.36
PNKP-218ENST00000625299 LPXNO60711 386 aa17.29■□□□□ 0.36
PNKP-218ENST00000625299 TOP1P11387 765 aaKnown RBP17.29■□□□□ 0.36
PNKP-218ENST00000625299 BTNL9Q6UXG8 535 aa17.29■□□□□ 0.36
PNKP-218ENST00000625299 PI4K2BQ8TCG2 481 aa17.29■□□□□ 0.36
PNKP-218ENST00000625299 OTUD7AQ8TE49 926 aaPredicted RBP17.29■□□□□ 0.36
PNKP-218ENST00000625299 TMEM47Q9BQJ4 181 aa17.29■□□□□ 0.36
PNKP-218ENST00000625299 ARIH2O95376 493 aa17.28■□□□□ 0.36
PNKP-218ENST00000625299 DEFB103AP81534 67 aa17.28■□□□□ 0.36
PNKP-218ENST00000625299 USH1GQ495M9 461 aa17.28■□□□□ 0.36
PNKP-218ENST00000625299 VPS53Q5VIR6 699 aa17.28■□□□□ 0.36
PNKP-218ENST00000625299 CHST3Q7LGC8 479 aa17.28■□□□□ 0.36
PNKP-218ENST00000625299 AFAP1L1Q8TED9 768 aa17.28■□□□□ 0.36
PNKP-218ENST00000625299 B4DLN1 442 aa17.27■□□□□ 0.36
PNKP-218ENST00000625299 RBAK-RBAKDNI3L0D1 243 aa17.27■□□□□ 0.36
PNKP-218ENST00000625299 ORC4O43929 436 aa17.27■□□□□ 0.36
PNKP-218ENST00000625299 SELPP16109 830 aa17.27■□□□□ 0.36
PNKP-218ENST00000625299 EDNRBP24530 442 aa17.27■□□□□ 0.36
PNKP-218ENST00000625299 NOVP48745 357 aa17.27■□□□□ 0.36
PNKP-218ENST00000625299 MRPL12P52815 198 aaKnown RBP17.27■□□□□ 0.36
PNKP-218ENST00000625299 GDF6Q6KF10 455 aaPredicted RBP17.27■□□□□ 0.36
PNKP-218ENST00000625299 LRRC8DQ7L1W4 858 aa17.27■□□□□ 0.36
PNKP-218ENST00000625299 DNERQ8NFT8 737 aa17.27■□□□□ 0.36
PNKP-218ENST00000625299 CAGE1Q8TC20 777 aa17.27■□□□□ 0.36
PNKP-218ENST00000625299 AFG1LQ8WV93 481 aa17.27■□□□□ 0.36
PNKP-218ENST00000625299 CRBNQ96SW2 442 aa17.27■□□□□ 0.36
PNKP-218ENST00000625299 C11orf16Q9NQ32 467 aa17.27■□□□□ 0.36
PNKP-218ENST00000625299 ANAPC4Q9UJX5 808 aa17.27■□□□□ 0.36
PNKP-218ENST00000625299 MMP3P08254 477 aa17.26■□□□□ 0.35
PNKP-218ENST00000625299 PDHBP11177 359 aa17.26■□□□□ 0.35
PNKP-218ENST00000625299 FAM117BQ6P1L5 589 aa17.26■□□□□ 0.35
PNKP-218ENST00000625299 CNKSR3Q6P9H4 555 aa17.26■□□□□ 0.35
PNKP-218ENST00000625299 SEPT14Q6ZU15 432 aa17.26■□□□□ 0.35
PNKP-218ENST00000625299 CD320Q9NPF0 282 aa17.26■□□□□ 0.35
PNKP-218ENST00000625299 PNMA2Q9UL42 364 aa17.26■□□□□ 0.35
PNKP-218ENST00000625299 ARIH1Q9Y4X5 557 aaPredicted RBP17.26■□□□□ 0.35
PNKP-218ENST00000625299 GPR37L1O60883 481 aa17.25■□□□□ 0.35
PNKP-218ENST00000625299 GPNMBQ14956 572 aa17.25■□□□□ 0.35
PNKP-218ENST00000625299 LY6KQ17RY6 165 aa17.25■□□□□ 0.35
PNKP-218ENST00000625299 DHX38Q92620 1227 aaKnown RBP17.25■□□□□ 0.35
PNKP-218ENST00000625299 TGS1Q96RS0 853 aaKnown RBP17.25■□□□□ 0.35
PNKP-218ENST00000625299 CTAGE1Q96RT6 745 aa17.25■□□□□ 0.35
PNKP-218ENST00000625299 UBE2ZQ9H832 354 aaPredicted RBP17.25■□□□□ 0.35
PNKP-218ENST00000625299 SUGCTQ9HAC7 445 aa17.25■□□□□ 0.35
PNKP-218ENST00000625299 SIP14410 1827 aa17.25■□□□□ 0.35
PNKP-218ENST00000625299 WDR19Q8NEZ3 1342 aa17.24■□□□□ 0.35
PNKP-218ENST00000625299 NBNO60934 754 aa17.24■□□□□ 0.35
PNKP-218ENST00000625299 GJB5O95377 273 aa17.24■□□□□ 0.35
PNKP-218ENST00000625299 GH1P01241 217 aa17.24■□□□□ 0.35
PNKP-218ENST00000625299 MX1P20591 662 aa17.24■□□□□ 0.35
PNKP-218ENST00000625299 ZNF543Q08ER8 600 aa17.24■□□□□ 0.35
PNKP-218ENST00000625299 TCTN1Q2MV58 587 aa17.24■□□□□ 0.35
PNKP-218ENST00000625299 ALG1Q9BT22 464 aa17.24■□□□□ 0.35
PNKP-218ENST00000625299 LMCD1Q9NZU5 365 aa17.24■□□□□ 0.35
PNKP-218ENST00000625299 LINC01553A4QN01 128 aa17.23■□□□□ 0.35
PNKP-218ENST00000625299 PI4K2BG5E9Z4 385 aa17.23■□□□□ 0.35
PNKP-218ENST00000625299 GOLGA8HP0CJ92 632 aa17.23■□□□□ 0.35
PNKP-218ENST00000625299 CKBP12277 381 aa17.23■□□□□ 0.35
PNKP-218ENST00000625299 CASTP20810 708 aaKnown RBP17.23■□□□□ 0.35
PNKP-218ENST00000625299 KCNA5P22460 613 aa17.23■□□□□ 0.35
PNKP-218ENST00000625299 SSTR3P32745 418 aaPredicted RBP17.23■□□□□ 0.35
PNKP-218ENST00000625299 HAND2P61296 217 aa17.23■□□□□ 0.35
PNKP-218ENST00000625299 ARHGAP1Q07960 439 aa17.23■□□□□ 0.35
PNKP-218ENST00000625299 CCDC62Q6P9F0 684 aa17.23■□□□□ 0.35
PNKP-218ENST00000625299 SESTD1Q86VW0 696 aa17.23■□□□□ 0.35
PNKP-218ENST00000625299 C7orf31Q8N865 590 aa17.23■□□□□ 0.35
PNKP-218ENST00000625299 KAT2BQ92831 832 aa17.23■□□□□ 0.35
PNKP-218ENST00000625299 RAD9AQ99638 391 aa17.23■□□□□ 0.35
PNKP-218ENST00000625299 CPVLQ9H3G5 476 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms