RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 NMIQ13287 307 aaPredicted RBP13.01□□□□□ -0.33
DDX41-218ENST00000625286 TCTN1Q2MV58 587 aa13.01□□□□□ -0.33
DDX41-218ENST00000625286 CCDC62Q6P9F0 684 aa13.01□□□□□ -0.33
DDX41-218ENST00000625286 UBA5Q9GZZ9 404 aa13.01□□□□□ -0.33
DDX41-218ENST00000625286 MTIF3Q9H2K0 278 aaKnown RBP13.01□□□□□ -0.33
DDX41-218ENST00000625286 TOMM22Q9NS69 142 aa13.01□□□□□ -0.33
DDX41-218ENST00000625286 COL20A1Q9P218 1284 aa13.01□□□□□ -0.33
DDX41-218ENST00000625286 MTCH2Q9Y6C9 303 aa13.01□□□□□ -0.33
DDX41-218ENST00000625286 LOC102724159A0A0B4J2E5 919 aa13□□□□□ -0.33
DDX41-218ENST00000625286 SUPT20HL2P0C7V6 817 aa13□□□□□ -0.33
DDX41-218ENST00000625286 POU3F3P20264 500 aaPredicted RBP13□□□□□ -0.33
DDX41-218ENST00000625286 CPT1AP50416 773 aa13□□□□□ -0.33
DDX41-218ENST00000625286 KCNQ1P51787 676 aa13□□□□□ -0.33
DDX41-218ENST00000625286 PWP2Q15269 919 aaKnown RBP13□□□□□ -0.33
DDX41-218ENST00000625286 NFRKBQ6P4R8 1299 aa13□□□□□ -0.33
DDX41-218ENST00000625286 TMCO2Q7Z6W1 182 aaPredicted RBP13□□□□□ -0.33
DDX41-218ENST00000625286 KAT2BQ92831 832 aa13□□□□□ -0.33
DDX41-218ENST00000625286 UHRF1Q96T88 793 aaPredicted RBP13□□□□□ -0.33
DDX41-218ENST00000625286 ZKSCAN3Q9BRR0 538 aa13□□□□□ -0.33
DDX41-218ENST00000625286 NEDD4P46934 1319 aa12.99□□□□□ -0.33
DDX41-218ENST00000625286 WDR19Q8NEZ3 1342 aa12.99□□□□□ -0.33
DDX41-218ENST00000625286 TXNP10599 105 aaKnown RBP12.99□□□□□ -0.33
DDX41-218ENST00000625286 TAP1Q03518 808 aa12.99□□□□□ -0.33
DDX41-218ENST00000625286 PDE4DQ08499 809 aa12.99□□□□□ -0.33
DDX41-218ENST00000625286 PPP2R5BQ15173 497 aa12.99□□□□□ -0.33
DDX41-218ENST00000625286 USH1GQ495M9 461 aa12.99□□□□□ -0.33
DDX41-218ENST00000625286 FAM47CQ5HY64 1035 aa12.99□□□□□ -0.33
DDX41-218ENST00000625286 TMEM67Q5HYA8 995 aa12.99□□□□□ -0.33
DDX41-218ENST00000625286 MICALL1Q8N3F8 863 aa12.99□□□□□ -0.33
DDX41-218ENST00000625286 DNERQ8NFT8 737 aa12.99□□□□□ -0.33
DDX41-218ENST00000625286 SCFD2Q8WU76 684 aa12.99□□□□□ -0.33
DDX41-218ENST00000625286 DHX38Q92620 1227 aaKnown RBP12.99□□□□□ -0.33
DDX41-218ENST00000625286 TTC14Q96N46 770 aa12.99□□□□□ -0.33
DDX41-218ENST00000625286 TAAR1Q96RJ0 339 aa12.99□□□□□ -0.33
DDX41-218ENST00000625286 CRBNQ96SW2 442 aa12.99□□□□□ -0.33
DDX41-218ENST00000625286 KIAA1217Q5T5P2 1943 aa12.98□□□□□ -0.33
DDX41-218ENST00000625286 TANC1Q9C0D5 1861 aa12.98□□□□□ -0.33
DDX41-218ENST00000625286 ZMYM6O95789 1325 aa12.98□□□□□ -0.33
DDX41-218ENST00000625286 PITPNM1O00562 1244 aa12.98□□□□□ -0.33
DDX41-218ENST00000625286 LPXNO60711 386 aa12.98□□□□□ -0.33
DDX41-218ENST00000625286 PFKMP08237 780 aa12.98□□□□□ -0.33
DDX41-218ENST00000625286 LY6KQ17RY6 165 aa12.98□□□□□ -0.33
DDX41-218ENST00000625286 GDF6Q6KF10 455 aaPredicted RBP12.98□□□□□ -0.33
DDX41-218ENST00000625286 HERC6Q8IVU3 1022 aa12.98□□□□□ -0.33
DDX41-218ENST00000625286 RGS22Q8NE09 1264 aa12.98□□□□□ -0.33
DDX41-218ENST00000625286 SYTL5Q8TDW5 730 aaPredicted RBP12.98□□□□□ -0.33
DDX41-218ENST00000625286 AFG1LQ8WV93 481 aa12.98□□□□□ -0.33
DDX41-218ENST00000625286 GPHNQ9NQX3 736 aaPredicted RBP12.98□□□□□ -0.33
DDX41-218ENST00000625286 CCDC171Q6TFL3 1326 aa12.97□□□□□ -0.33
DDX41-218ENST00000625286 LCHNA4D1U4 455 aa12.97□□□□□ -0.33
DDX41-218ENST00000625286 NKRFO15226 690 aaKnown RBP eCLIP12.97□□□□□ -0.33
DDX41-218ENST00000625286 RFC2P35250 354 aa12.97□□□□□ -0.33
DDX41-218ENST00000625286 RRP1P56182 461 aaKnown RBP12.97□□□□□ -0.33
DDX41-218ENST00000625286 ARHGAP1Q07960 439 aa12.97□□□□□ -0.33
DDX41-218ENST00000625286 HDAC1Q13547 482 aaPredicted RBP12.97□□□□□ -0.33
DDX41-218ENST00000625286 MFSD6Q6ZSS7 791 aa12.97□□□□□ -0.33
DDX41-218ENST00000625286 ADGRF4Q8IZF3 695 aa12.97□□□□□ -0.33
DDX41-218ENST00000625286 PHOSPHO2Q8TCD6 241 aa12.97□□□□□ -0.33
DDX41-218ENST00000625286 MYH7BA7E2Y1 1941 aa12.97□□□□□ -0.33
DDX41-218ENST00000625286 OPLAHO14841 1288 aa12.96□□□□□ -0.33
DDX41-218ENST00000625286 KPNA6O60684 536 aa12.96□□□□□ -0.33
DDX41-218ENST00000625286 MMP3P08254 477 aa12.96□□□□□ -0.33
DDX41-218ENST00000625286 CHMP4BP1P59074 171 aa12.96□□□□□ -0.33
DDX41-218ENST00000625286 PTPN11Q06124 597 aaPredicted RBP12.96□□□□□ -0.33
DDX41-218ENST00000625286 HIC1Q14526 733 aa12.96□□□□□ -0.33
DDX41-218ENST00000625286 CDC37Q16543 378 aaPredicted RBP12.96□□□□□ -0.33
DDX41-218ENST00000625286 PTGISQ16647 500 aa12.96□□□□□ -0.33
DDX41-218ENST00000625286 TRAF7Q6Q0C0 670 aa12.96□□□□□ -0.33
DDX41-218ENST00000625286 SEPT14Q6ZU15 432 aa12.96□□□□□ -0.33
DDX41-218ENST00000625286 DGKHQ86XP1 1220 aa12.96□□□□□ -0.33
DDX41-218ENST00000625286 ARNTL2Q8WYA1 636 aa12.96□□□□□ -0.33
DDX41-218ENST00000625286 ANKS1AQ92625 1134 aa12.96□□□□□ -0.33
DDX41-218ENST00000625286 WNT8BQ93098 351 aa12.96□□□□□ -0.33
DDX41-218ENST00000625286 FTOQ9C0B1 505 aaKnown RBP eCLIP12.96□□□□□ -0.33
DDX41-218ENST00000625286 TLL1O43897 1013 aa12.95□□□□□ -0.34
DDX41-218ENST00000625286 NBNO60934 754 aa12.95□□□□□ -0.34
DDX41-218ENST00000625286 RGS20O76081 388 aa12.95□□□□□ -0.34
DDX41-218ENST00000625286 SDSP20132 328 aa12.95□□□□□ -0.34
DDX41-218ENST00000625286 DEFB103AP81534 67 aa12.95□□□□□ -0.34
DDX41-218ENST00000625286 GRB10Q13322 594 aa12.95□□□□□ -0.34
DDX41-218ENST00000625286 QRICH1Q2TAL8 776 aa12.95□□□□□ -0.34
DDX41-218ENST00000625286 CHST3Q7LGC8 479 aa12.95□□□□□ -0.34
DDX41-218ENST00000625286 SESTD1Q86VW0 696 aa12.95□□□□□ -0.34
DDX41-218ENST00000625286 RETREG2Q8NC44 543 aa12.95□□□□□ -0.34
DDX41-218ENST00000625286 SLC9A7Q96T83 725 aa12.95□□□□□ -0.34
DDX41-218ENST00000625286 LNPKQ9C0E8 428 aa12.95□□□□□ -0.34
DDX41-218ENST00000625286 DDX41Q9UJV9 622 aaKnown RBP12.95□□□□□ -0.34
DDX41-218ENST00000625286 MYH6P13533 1939 aa12.95□□□□□ -0.34
DDX41-218ENST00000625286 KDM4AO75164 1064 aa12.94□□□□□ -0.34
DDX41-218ENST00000625286 ACTN1P12814 892 aa12.94□□□□□ -0.34
DDX41-218ENST00000625286 WDR5P61964 334 aaKnown RBP12.94□□□□□ -0.34
DDX41-218ENST00000625286 ZNF200P98182 395 aaPredicted RBP12.94□□□□□ -0.34
DDX41-218ENST00000625286 BFSP2Q13515 415 aa12.94□□□□□ -0.34
DDX41-218ENST00000625286 MBTPS1Q14703 1052 aa12.94□□□□□ -0.34
DDX41-218ENST00000625286 SLC35G1Q2M3R5 365 aa12.94□□□□□ -0.34
DDX41-218ENST00000625286 TRIM71Q2Q1W2 868 aaKnown RBP12.94□□□□□ -0.34
DDX41-218ENST00000625286 BRDTQ58F21 947 aaPredicted RBP12.94□□□□□ -0.34
DDX41-218ENST00000625286 GPATCH4Q5T3I0 446 aaKnown RBP12.94□□□□□ -0.34
DDX41-218ENST00000625286 TICAM2Q86XR7 235 aa12.94□□□□□ -0.34
DDX41-218ENST00000625286 PLEKHM2Q8IWE5 1019 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms