RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 LCTP09848 1927 aa20.27■□□□□ 0.84
PTCHD3-202ENST00000622555 SPTLC2O15270 562 aa20.27■□□□□ 0.83
PTCHD3-202ENST00000622555 BMP15O95972 392 aa20.27■□□□□ 0.83
PTCHD3-202ENST00000622555 HTRA3P83110 453 aa20.27■□□□□ 0.83
PTCHD3-202ENST00000622555 FAM110CQ1W6H9 321 aa20.27■□□□□ 0.83
PTCHD3-202ENST00000622555 KCNG4Q8TDN1 519 aa20.27■□□□□ 0.83
PTCHD3-202ENST00000622555 R3HDMLQ9H3Y0 253 aa20.27■□□□□ 0.83
PTCHD3-202ENST00000622555 ZFYVE28Q9HCC9 887 aa20.27■□□□□ 0.83
PTCHD3-202ENST00000622555 CPA4Q9UI42 421 aa20.27■□□□□ 0.83
PTCHD3-202ENST00000622555 PFASO15067 1338 aa20.26■□□□□ 0.83
PTCHD3-202ENST00000622555 ELP1O95163 1332 aa20.26■□□□□ 0.83
PTCHD3-202ENST00000622555 USP11P51784 963 aa20.26■□□□□ 0.83
PTCHD3-202ENST00000622555 CCAR1Q8IX12 1150 aaKnown RBP20.26■□□□□ 0.83
PTCHD3-202ENST00000622555 TAAR1Q96RJ0 339 aa20.26■□□□□ 0.83
PTCHD3-202ENST00000622555 PORCNQ9H237 461 aa20.26■□□□□ 0.83
PTCHD3-202ENST00000622555 EFCC1Q9HA90 598 aa20.26■□□□□ 0.83
PTCHD3-202ENST00000622555 PLXNB2O15031 1838 aa20.26■□□□□ 0.83
PTCHD3-202ENST00000622555 EDIL3O43854 480 aa20.25■□□□□ 0.83
PTCHD3-202ENST00000622555 UBXN2AP68543 259 aa20.25■□□□□ 0.83
PTCHD3-202ENST00000622555 REM2Q8IYK8 340 aaPredicted RBP20.25■□□□□ 0.83
PTCHD3-202ENST00000622555 CRYGNQ8WXF5 182 aa20.25■□□□□ 0.83
PTCHD3-202ENST00000622555 NAP1L4Q99733 375 aaKnown RBP20.25■□□□□ 0.83
PTCHD3-202ENST00000622555 LMBRD1Q9NUN5 540 aa20.25■□□□□ 0.83
PTCHD3-202ENST00000622555 TLR2O60603 784 aa20.24■□□□□ 0.83
PTCHD3-202ENST00000622555 TDP2O95551 362 aa20.24■□□□□ 0.83
PTCHD3-202ENST00000622555 MARCKSP29966 332 aaPredicted RBP20.24■□□□□ 0.83
PTCHD3-202ENST00000622555 ME1P48163 572 aa20.24■□□□□ 0.83
PTCHD3-202ENST00000622555 PTGDRQ13258 359 aa20.24■□□□□ 0.83
PTCHD3-202ENST00000622555 CRHR2Q13324 411 aa20.24■□□□□ 0.83
PTCHD3-202ENST00000622555 GSE1Q14687 1217 aa20.24■□□□□ 0.83
PTCHD3-202ENST00000622555 TPRNQ4KMQ1 711 aa20.24■□□□□ 0.83
PTCHD3-202ENST00000622555 JMYQ8N9B5 988 aa20.24■□□□□ 0.83
PTCHD3-202ENST00000622555 PURBQ96QR8 312 aaKnown RBP20.24■□□□□ 0.83
PTCHD3-202ENST00000622555 RMDN3Q96TC7 470 aa20.24■□□□□ 0.83
PTCHD3-202ENST00000622555 MMP19Q99542 508 aa20.24■□□□□ 0.83
PTCHD3-202ENST00000622555 RPTORQ8N122 1335 aa20.24■□□□□ 0.83
PTCHD3-202ENST00000622555 ALDH1A1P00352 501 aa20.24■□□□□ 0.83
PTCHD3-202ENST00000622555 BCRP11274 1271 aa20.24■□□□□ 0.83
PTCHD3-202ENST00000622555 GCFC2P16383 781 aaKnown RBP20.24■□□□□ 0.83
PTCHD3-202ENST00000622555 VEGFBP49765 207 aa20.24■□□□□ 0.83
PTCHD3-202ENST00000622555 ORC2Q13416 577 aaPredicted RBP20.24■□□□□ 0.83
PTCHD3-202ENST00000622555 KCTD2Q14681 263 aa20.24■□□□□ 0.83
PTCHD3-202ENST00000622555 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.24■□□□□ 0.83
PTCHD3-202ENST00000622555 MRVI1Q9Y6F6 885 aa20.24■□□□□ 0.83
PTCHD3-202ENST00000622555 CA12O43570 354 aa20.23■□□□□ 0.83
PTCHD3-202ENST00000622555 NEMFO60524 1076 aa20.23■□□□□ 0.83
PTCHD3-202ENST00000622555 CYP3A4P08684 503 aa20.23■□□□□ 0.83
PTCHD3-202ENST00000622555 FCER1AP12319 257 aa20.23■□□□□ 0.83
PTCHD3-202ENST00000622555 EIF2AK2P19525 551 aaKnown RBP20.23■□□□□ 0.83
PTCHD3-202ENST00000622555 ZNF76P36508 570 aa20.23■□□□□ 0.83
PTCHD3-202ENST00000622555 ATP2C1P98194 919 aaPredicted RBP20.23■□□□□ 0.83
PTCHD3-202ENST00000622555 ARHGEF16Q5VV41 709 aa20.23■□□□□ 0.83
PTCHD3-202ENST00000622555 PPP4R3AQ6IN85 833 aa20.23■□□□□ 0.83
PTCHD3-202ENST00000622555 PXMP2Q9NR77 195 aa20.23■□□□□ 0.83
PTCHD3-202ENST00000622555 DDX25Q9UHL0 483 aaKnown RBP20.23■□□□□ 0.83
PTCHD3-202ENST00000622555 FRMPD4Q14CM0 1322 aa20.23■□□□□ 0.83
PTCHD3-202ENST00000622555 GOLGA6L4A6NEF3 574 aa20.22■□□□□ 0.83
PTCHD3-202ENST00000622555 PPP6R2O75170 966 aa20.22■□□□□ 0.83
PTCHD3-202ENST00000622555 GADD45BO75293 160 aaPredicted RBP20.22■□□□□ 0.83
PTCHD3-202ENST00000622555 PTMSP20962 102 aa20.22■□□□□ 0.83
PTCHD3-202ENST00000622555 MOXD1Q6UVY6 613 aa20.22■□□□□ 0.83
PTCHD3-202ENST00000622555 PCDHA7Q9UN72 937 aa20.22■□□□□ 0.83
PTCHD3-202ENST00000622555 POTEB2H3BUK9 544 aa20.22■□□□□ 0.83
PTCHD3-202ENST00000622555 SLC37A4O43826 429 aa20.22■□□□□ 0.83
PTCHD3-202ENST00000622555 CNTN2Q02246 1040 aa20.22■□□□□ 0.83
PTCHD3-202ENST00000622555 C17orf99Q6UX52 265 aa20.22■□□□□ 0.83
PTCHD3-202ENST00000622555 POTEDQ86YR6 584 aa20.22■□□□□ 0.83
PTCHD3-202ENST00000622555 IL31RAQ8NI17 732 aa20.22■□□□□ 0.83
PTCHD3-202ENST00000622555 NSUN6Q8TEA1 469 aaKnown RBP20.22■□□□□ 0.83
PTCHD3-202ENST00000622555 TMEM60Q9H2L4 133 aa20.22■□□□□ 0.83
PTCHD3-202ENST00000622555 CYP3A7-CYP3A51PA0A087WV96 503 aa20.21■□□□□ 0.83
PTCHD3-202ENST00000622555 CYP3A7P24462 503 aa20.21■□□□□ 0.83
PTCHD3-202ENST00000622555 MAPK4P31152 587 aa20.21■□□□□ 0.83
PTCHD3-202ENST00000622555 CIITAP33076 1130 aa20.21■□□□□ 0.83
PTCHD3-202ENST00000622555 MAP2K2P36507 400 aa20.21■□□□□ 0.83
PTCHD3-202ENST00000622555 PGM5Q15124 567 aa20.21■□□□□ 0.83
PTCHD3-202ENST00000622555 C4orf32Q8N8J7 132 aa20.21■□□□□ 0.83
PTCHD3-202ENST00000622555 KRI1Q8N9T8 703 aaKnown RBP20.21■□□□□ 0.83
PTCHD3-202ENST00000622555 PDCD2LQ9BRP1 358 aa20.21■□□□□ 0.83
PTCHD3-202ENST00000622555 MORC2Q9Y6X9 1032 aaPredicted RBP20.21■□□□□ 0.83
PTCHD3-202ENST00000622555 IVNS1ABPQ9Y6Y0 642 aa20.21■□□□□ 0.83
PTCHD3-202ENST00000622555 LAD1O00515 517 aa20.2■□□□□ 0.82
PTCHD3-202ENST00000622555 PGK2P07205 417 aa20.2■□□□□ 0.82
PTCHD3-202ENST00000622555 UBE2HP62256 183 aa20.2■□□□□ 0.82
PTCHD3-202ENST00000622555 CALCRLQ16602 461 aa20.2■□□□□ 0.82
PTCHD3-202ENST00000622555 PRR16Q569H4 304 aa20.2■□□□□ 0.82
PTCHD3-202ENST00000622555 PCNX4Q63HM2 1172 aa20.2■□□□□ 0.82
PTCHD3-202ENST00000622555 MBOAT7Q96N66 472 aa20.2■□□□□ 0.82
PTCHD3-202ENST00000622555 FBXO2Q9UK22 296 aaPredicted RBP20.2■□□□□ 0.82
PTCHD3-202ENST00000622555 PLXNA1Q9UIW2 1896 aa20.2■□□□□ 0.82
PTCHD3-202ENST00000622555 FAM86B1E9PN63 330 aa20.19■□□□□ 0.82
PTCHD3-202ENST00000622555 FAM86B2P0C5J1 330 aa20.19■□□□□ 0.82
PTCHD3-202ENST00000622555 OR52Z1P0C646 297 aa20.19■□□□□ 0.82
PTCHD3-202ENST00000622555 MYCLP12524 364 aaPredicted RBP20.19■□□□□ 0.82
PTCHD3-202ENST00000622555 GPR142Q7Z601 462 aa20.19■□□□□ 0.82
PTCHD3-202ENST00000622555 FAM133AQ8N9E0 248 aa20.19■□□□□ 0.82
PTCHD3-202ENST00000622555 DNERQ8NFT8 737 aa20.19■□□□□ 0.82
PTCHD3-202ENST00000622555 ZFP91Q96JP5 570 aaPredicted RBP20.19■□□□□ 0.82
PTCHD3-202ENST00000622555 STRNO43815 780 aa20.19■□□□□ 0.82
PTCHD3-202ENST00000622555 CUTAO60888 179 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms