RNA–Protein interactions for RNA: ENST00000622534.1

GTF3C2-214, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5 BASIC

Gene GTF3C2, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-214ENST00000622534 ANO1Q5XXA6 986 aa16.5■□□□□ 0.23
GTF3C2-214ENST00000622534 PPP4R3AQ6IN85 833 aa16.5■□□□□ 0.23
GTF3C2-214ENST00000622534 XRRA1Q6P2D8 792 aa16.5■□□□□ 0.23
GTF3C2-214ENST00000622534 FAM133AQ8N9E0 248 aa16.5■□□□□ 0.23
GTF3C2-214ENST00000622534 PGBD1Q96JS3 809 aa16.5■□□□□ 0.23
GTF3C2-214ENST00000622534 USP28Q96RU2 1077 aa16.5■□□□□ 0.23
GTF3C2-214ENST00000622534 SCAND2PQ9GZW5 306 aaPredicted RBP16.5■□□□□ 0.23
GTF3C2-214ENST00000622534 R3HDMLQ9H3Y0 253 aa16.5■□□□□ 0.23
GTF3C2-214ENST00000622534 RNF186Q9NXI6 227 aa16.5■□□□□ 0.23
GTF3C2-214ENST00000622534 YEATS4O95619 227 aa16.49■□□□□ 0.23
GTF3C2-214ENST00000622534 GCFC2P16383 781 aaKnown RBP16.49■□□□□ 0.23
GTF3C2-214ENST00000622534 PTPREP23469 700 aa16.49■□□□□ 0.23
GTF3C2-214ENST00000622534 GPR142Q7Z601 462 aa16.49■□□□□ 0.23
GTF3C2-214ENST00000622534 PLEKHH3Q7Z736 793 aa16.49■□□□□ 0.23
GTF3C2-214ENST00000622534 CCAR1Q8IX12 1150 aaKnown RBP16.49■□□□□ 0.23
GTF3C2-214ENST00000622534 MBOAT7Q96N66 472 aa16.49■□□□□ 0.23
GTF3C2-214ENST00000622534 TAAR1Q96RJ0 339 aa16.49■□□□□ 0.23
GTF3C2-214ENST00000622534 PXMP2Q9NR77 195 aa16.49■□□□□ 0.23
GTF3C2-214ENST00000622534 CEP131Q9UPN4 1083 aa16.49■□□□□ 0.23
GTF3C2-214ENST00000622534 POTEB2H3BUK9 544 aa16.48■□□□□ 0.23
GTF3C2-214ENST00000622534 GRB14Q14449 540 aa16.48■□□□□ 0.23
GTF3C2-214ENST00000622534 FOXD4L6Q3SYB3 417 aaPredicted RBP16.48■□□□□ 0.23
GTF3C2-214ENST00000622534 FOXD4L3Q6VB84 417 aaPredicted RBP16.48■□□□□ 0.23
GTF3C2-214ENST00000622534 NSUN6Q8TEA1 469 aaKnown RBP16.48■□□□□ 0.23
GTF3C2-214ENST00000622534 IWS1Q96ST2 819 aa16.48■□□□□ 0.23
GTF3C2-214ENST00000622534 RMDN3Q96TC7 470 aa16.48■□□□□ 0.23
GTF3C2-214ENST00000622534 RCOR1Q9UKL0 485 aa16.48■□□□□ 0.23
GTF3C2-214ENST00000622534 PCDHB6Q9Y5E3 794 aa16.48■□□□□ 0.23
GTF3C2-214ENST00000622534 ZNF236Q9UL36 1845 aa16.48■□□□□ 0.23
GTF3C2-214ENST00000622534 SLC15A5A6NIM6 579 aa16.48■□□□□ 0.23
GTF3C2-214ENST00000622534 PTPAQ15257 358 aa16.48■□□□□ 0.23
GTF3C2-214ENST00000622534 SF3A1Q15459 793 aaKnown RBP16.48■□□□□ 0.23
GTF3C2-214ENST00000622534 CSPP1Q1MSJ5 1256 aa16.48■□□□□ 0.23
GTF3C2-214ENST00000622534 LETM2Q2VYF4 491 aa16.48■□□□□ 0.23
GTF3C2-214ENST00000622534 PCNX4Q63HM2 1172 aa16.48■□□□□ 0.23
GTF3C2-214ENST00000622534 TMEM87AQ8NBN3 555 aa16.48■□□□□ 0.23
GTF3C2-214ENST00000622534 PDCD2LQ9BRP1 358 aa16.48■□□□□ 0.23
GTF3C2-214ENST00000622534 TFIP11Q9UBB9 837 aaKnown RBP16.48■□□□□ 0.23
GTF3C2-214ENST00000622534 ADD3Q9UEY8 706 aaKnown RBP16.48■□□□□ 0.23
GTF3C2-214ENST00000622534 CNPY2Q9Y2B0 182 aa16.48■□□□□ 0.23
GTF3C2-214ENST00000622534 CLIC4Q9Y696 253 aa16.48■□□□□ 0.23
GTF3C2-214ENST00000622534 IVNS1ABPQ9Y6Y0 642 aa16.48■□□□□ 0.23
GTF3C2-214ENST00000622534 SLC39A14Q15043 492 aa16.47■□□□□ 0.23
GTF3C2-214ENST00000622534 ARHGEF16Q5VV41 709 aa16.47■□□□□ 0.23
GTF3C2-214ENST00000622534 LINC00301Q8NCQ3 95 aa16.47■□□□□ 0.23
GTF3C2-214ENST00000622534 DIS3Q9Y2L1 958 aaKnown RBP16.47■□□□□ 0.23
GTF3C2-214ENST00000622534 ELP1O95163 1332 aa16.46■□□□□ 0.23
GTF3C2-214ENST00000622534 LAD1O00515 517 aa16.46■□□□□ 0.23
GTF3C2-214ENST00000622534 WNT7AO00755 349 aa16.46■□□□□ 0.23
GTF3C2-214ENST00000622534 PGM5Q15124 567 aa16.46■□□□□ 0.23
GTF3C2-214ENST00000622534 Q4G0T1 1027 aa16.46■□□□□ 0.23
GTF3C2-214ENST00000622534 WDR78Q5VTH9 848 aa16.46■□□□□ 0.23
GTF3C2-214ENST00000622534 LEO1Q8WVC0 666 aaPredicted RBP16.46■□□□□ 0.23
GTF3C2-214ENST00000622534 CHAMP1Q96JM3 812 aa16.46■□□□□ 0.23
GTF3C2-214ENST00000622534 SOWAHBA6NEL2 793 aa16.46■□□□□ 0.22
GTF3C2-214ENST00000622534 B4DLN1 442 aa16.46■□□□□ 0.22
GTF3C2-214ENST00000622534 CCNT1O60563 726 aaKnown RBP16.46■□□□□ 0.22
GTF3C2-214ENST00000622534 PPP6R2O75170 966 aa16.46■□□□□ 0.22
GTF3C2-214ENST00000622534 STAM2O75886 525 aa16.46■□□□□ 0.22
GTF3C2-214ENST00000622534 NCLP19338 710 aaKnown RBP16.46■□□□□ 0.22
GTF3C2-214ENST00000622534 ATP2B1P20020 1258 aa16.46■□□□□ 0.22
GTF3C2-214ENST00000622534 EDNRBP24530 442 aa16.46■□□□□ 0.22
GTF3C2-214ENST00000622534 ADORA2AP29274 412 aa16.46■□□□□ 0.22
GTF3C2-214ENST00000622534 MAP2K1Q02750 393 aaPredicted RBP16.46■□□□□ 0.22
GTF3C2-214ENST00000622534 NBR1Q14596 966 aa16.46■□□□□ 0.22
GTF3C2-214ENST00000622534 ZNF174Q15697 407 aa16.46■□□□□ 0.22
GTF3C2-214ENST00000622534 ZNF792Q3KQV3 632 aa16.46■□□□□ 0.22
GTF3C2-214ENST00000622534 MORN1Q5T089 497 aa16.46■□□□□ 0.22
GTF3C2-214ENST00000622534 NIPA1Q7RTP0 329 aa16.46■□□□□ 0.22
GTF3C2-214ENST00000622534 ZNF467Q7Z7K2 595 aaPredicted RBP16.46■□□□□ 0.22
GTF3C2-214ENST00000622534 VSIG10LQ86VR7 867 aa16.46■□□□□ 0.22
GTF3C2-214ENST00000622534 C4orf32Q8N8J7 132 aa16.46■□□□□ 0.22
GTF3C2-214ENST00000622534 KCNG4Q8TDN1 519 aa16.46■□□□□ 0.22
GTF3C2-214ENST00000622534 FTOQ9C0B1 505 aaKnown RBP eCLIP16.46■□□□□ 0.22
GTF3C2-214ENST00000622534 TRPA1O75762 1119 aa16.45■□□□□ 0.22
GTF3C2-214ENST00000622534 TBC1D8O95759 1140 aa16.45■□□□□ 0.22
GTF3C2-214ENST00000622534 CCND2P30279 289 aa16.45■□□□□ 0.22
GTF3C2-214ENST00000622534 ALDH5A1P51649 535 aaPredicted RBP16.45■□□□□ 0.22
GTF3C2-214ENST00000622534 ATP2C1P98194 919 aaPredicted RBP16.45■□□□□ 0.22
GTF3C2-214ENST00000622534 CNTN2Q02246 1040 aa16.45■□□□□ 0.22
GTF3C2-214ENST00000622534 STK38Q15208 465 aa16.45■□□□□ 0.22
GTF3C2-214ENST00000622534 MORC4Q8TE76 937 aa16.45■□□□□ 0.22
GTF3C2-214ENST00000622534 SPATA32Q96LK8 384 aa16.45■□□□□ 0.22
GTF3C2-214ENST00000622534 FGD4Q96M96 766 aa16.45■□□□□ 0.22
GTF3C2-214ENST00000622534 PURBQ96QR8 312 aaKnown RBP16.45■□□□□ 0.22
GTF3C2-214ENST00000622534 MPHOSPH6Q99547 160 aaKnown RBP16.45■□□□□ 0.22
GTF3C2-214ENST00000622534 LCTP09848 1927 aa16.45■□□□□ 0.22
GTF3C2-214ENST00000622534 PLXNB2O15031 1838 aa16.45■□□□□ 0.22
GTF3C2-214ENST00000622534 ASTN1O14525 1302 aa16.44■□□□□ 0.22
GTF3C2-214ENST00000622534 NEMFO60524 1076 aa16.44■□□□□ 0.22
GTF3C2-214ENST00000622534 TDP2O95551 362 aa16.44■□□□□ 0.22
GTF3C2-214ENST00000622534 NR3C2P08235 984 aa16.44■□□□□ 0.22
GTF3C2-214ENST00000622534 EIF2AK2P19525 551 aaKnown RBP16.44■□□□□ 0.22
GTF3C2-214ENST00000622534 MCM7P33993 719 aa16.44■□□□□ 0.22
GTF3C2-214ENST00000622534 LACTBP83111 547 aaPredicted RBP16.44■□□□□ 0.22
GTF3C2-214ENST00000622534 USP6NLQ92738 828 aa16.44■□□□□ 0.22
GTF3C2-214ENST00000622534 SLC5A4Q9NY91 659 aa16.44■□□□□ 0.22
GTF3C2-214ENST00000622534 DDX25Q9UHL0 483 aaKnown RBP16.44■□□□□ 0.22
GTF3C2-214ENST00000622534 UBIAD1Q9Y5Z9 338 aa16.44■□□□□ 0.22
GTF3C2-214ENST00000622534 IGLV3-22A0A075B6J6 115 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms