RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 POTEDQ86YR6 584 aa14.03□□□□□ -0.16
SCAMP1-207ENST00000621999 GPRC5AQ8NFJ5 357 aa14.03□□□□□ -0.16
SCAMP1-207ENST00000621999 KIAA1024Q9UPX6 916 aa14.03□□□□□ -0.16
SCAMP1-207ENST00000621999 PDHXO00330 501 aa14.02□□□□□ -0.16
SCAMP1-207ENST00000621999 TNPO2O14787 897 aaKnown RBP14.02□□□□□ -0.16
SCAMP1-207ENST00000621999 U2AF2P26368 475 aaKnown RBP eCLIP14.02□□□□□ -0.16
SCAMP1-207ENST00000621999 LONP1P36776 959 aaKnown RBP14.02□□□□□ -0.16
SCAMP1-207ENST00000621999 STXBP2Q15833 593 aa14.02□□□□□ -0.16
SCAMP1-207ENST00000621999 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.02□□□□□ -0.16
SCAMP1-207ENST00000621999 TSG101Q99816 390 aa14.02□□□□□ -0.16
SCAMP1-207ENST00000621999 TMEM63CQ9P1W3 806 aa14.02□□□□□ -0.16
SCAMP1-207ENST00000621999 CNTNAP1P78357 1384 aa14.02□□□□□ -0.16
SCAMP1-207ENST00000621999 KIF20AO95235 890 aa14.02□□□□□ -0.16
SCAMP1-207ENST00000621999 HERVK_113P62684 666 aa14.02□□□□□ -0.16
SCAMP1-207ENST00000621999 TYRO3Q06418 890 aa14.02□□□□□ -0.16
SCAMP1-207ENST00000621999 MTMR1Q13613 665 aa14.02□□□□□ -0.16
SCAMP1-207ENST00000621999 GPT2Q8TD30 523 aa14.02□□□□□ -0.16
SCAMP1-207ENST00000621999 TBC1D5Q92609 795 aa14.02□□□□□ -0.16
SCAMP1-207ENST00000621999 EMILIN3Q9NT22 766 aa14.02□□□□□ -0.16
SCAMP1-207ENST00000621999 TBC1D7Q9P0N9 293 aa14.02□□□□□ -0.16
SCAMP1-207ENST00000621999 MEIS1O00470 390 aa14.02□□□□□ -0.17
SCAMP1-207ENST00000621999 JAG1P78504 1218 aa14.02□□□□□ -0.17
SCAMP1-207ENST00000621999 BICD1Q96G01 975 aa14.02□□□□□ -0.17
SCAMP1-207ENST00000621999 ASCC2Q9H1I8 757 aaPredicted RBP14.02□□□□□ -0.17
SCAMP1-207ENST00000621999 POTEMA6NI47 508 aa14.02□□□□□ -0.17
SCAMP1-207ENST00000621999 LAD1O00515 517 aa14.02□□□□□ -0.17
SCAMP1-207ENST00000621999 NFIBO00712 420 aa14.02□□□□□ -0.17
SCAMP1-207ENST00000621999 PNOCQ13519 176 aa14.02□□□□□ -0.17
SCAMP1-207ENST00000621999 MB21D1Q8N884 522 aa14.02□□□□□ -0.17
SCAMP1-207ENST00000621999 CPA4Q9UI42 421 aa14.02□□□□□ -0.17
SCAMP1-207ENST00000621999 NOM1Q5C9Z4 860 aaKnown RBP14.01□□□□□ -0.17
SCAMP1-207ENST00000621999 LRSAM1Q6UWE0 723 aa14.01□□□□□ -0.17
SCAMP1-207ENST00000621999 WDR18Q9BV38 432 aa14.01□□□□□ -0.17
SCAMP1-207ENST00000621999 NT5C3AQ9H0P0 336 aa14.01□□□□□ -0.17
SCAMP1-207ENST00000621999 CLSTN2Q9H4D0 955 aa14.01□□□□□ -0.17
SCAMP1-207ENST00000621999 ZFYVE28Q9HCC9 887 aa14.01□□□□□ -0.17
SCAMP1-207ENST00000621999 SRPRBQ9Y5M8 271 aaKnown RBP14.01□□□□□ -0.17
SCAMP1-207ENST00000621999 ZC3H4Q9UPT8 1303 aaKnown RBP14.01□□□□□ -0.17
SCAMP1-207ENST00000621999 ATRNL1Q5VV63 1379 aa14.01□□□□□ -0.17
SCAMP1-207ENST00000621999 VWA5AO00534 786 aa14.01□□□□□ -0.17
SCAMP1-207ENST00000621999 TRIM47Q96LD4 638 aa14.01□□□□□ -0.17
SCAMP1-207ENST00000621999 DSG3P32926 999 aa14.01□□□□□ -0.17
SCAMP1-207ENST00000621999 HERC4Q5GLZ8 1057 aaPredicted RBP14.01□□□□□ -0.17
SCAMP1-207ENST00000621999 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.01□□□□□ -0.17
SCAMP1-207ENST00000621999 ERCC3P19447 782 aa14□□□□□ -0.17
SCAMP1-207ENST00000621999 PPIL2Q13356 520 aa14□□□□□ -0.17
SCAMP1-207ENST00000621999 POSTNQ15063 836 aa14□□□□□ -0.17
SCAMP1-207ENST00000621999 STXBP4Q6ZWJ1 553 aa14□□□□□ -0.17
SCAMP1-207ENST00000621999 GJA10Q969M2 543 aa14□□□□□ -0.17
SCAMP1-207ENST00000621999 RABGAP1Q9Y3P9 1069 aa14□□□□□ -0.17
SCAMP1-207ENST00000621999 COL4A1P02462 1669 aa14□□□□□ -0.17
SCAMP1-207ENST00000621999 IL17RAQ96F46 866 aa14□□□□□ -0.17
SCAMP1-207ENST00000621999 CDHR1Q96JP9 859 aa14□□□□□ -0.17
SCAMP1-207ENST00000621999 TAAR1Q96RJ0 339 aa14□□□□□ -0.17
SCAMP1-207ENST00000621999 TCHPQ9BT92 498 aa14□□□□□ -0.17
SCAMP1-207ENST00000621999 TNS1Q9HBL0 1735 aaKnown RBP14□□□□□ -0.17
SCAMP1-207ENST00000621999 CCDC169A6NNP5 214 aa14□□□□□ -0.17
SCAMP1-207ENST00000621999 SREBF2Q12772 1141 aa14□□□□□ -0.17
SCAMP1-207ENST00000621999 CCDC65Q8IXS2 484 aa14□□□□□ -0.17
SCAMP1-207ENST00000621999 TEPSINQ96N21 525 aa14□□□□□ -0.17
SCAMP1-207ENST00000621999 WDR11Q9BZH6 1224 aa14□□□□□ -0.17
SCAMP1-207ENST00000621999 N4BP2Q86UW6 1770 aaPredicted RBP14□□□□□ -0.17
SCAMP1-207ENST00000621999 DKC1O60832 514 aaKnown RBP eCLIP14□□□□□ -0.17
SCAMP1-207ENST00000621999 XKR9Q5GH70 373 aa14□□□□□ -0.17
SCAMP1-207ENST00000621999 TCERG1LQ5VWI1 586 aa14□□□□□ -0.17
SCAMP1-207ENST00000621999 PP2D1A8MPX8 630 aa13.99□□□□□ -0.17
SCAMP1-207ENST00000621999 PSMA7O14818 248 aa13.99□□□□□ -0.17
SCAMP1-207ENST00000621999 NR3C2P08235 984 aa13.99□□□□□ -0.17
SCAMP1-207ENST00000621999 CYP2B6P20813 491 aa13.99□□□□□ -0.17
SCAMP1-207ENST00000621999 CEP55Q53EZ4 464 aa13.99□□□□□ -0.17
SCAMP1-207ENST00000621999 FILIP1Q7Z7B0 1213 aa13.99□□□□□ -0.17
SCAMP1-207ENST00000621999 SPC25Q9HBM1 224 aa13.99□□□□□ -0.17
SCAMP1-207ENST00000621999 TRPC6Q9Y210 931 aa13.99□□□□□ -0.17
SCAMP1-207ENST00000621999 A0A1W2PQ27 194 aa13.99□□□□□ -0.17
SCAMP1-207ENST00000621999 A0A1W2PQ64 194 aa13.99□□□□□ -0.17
SCAMP1-207ENST00000621999 A0A1W2PQD8 194 aa13.99□□□□□ -0.17
SCAMP1-207ENST00000621999 PGK2P07205 417 aa13.99□□□□□ -0.17
SCAMP1-207ENST00000621999 PTPREP23469 700 aa13.99□□□□□ -0.17
SCAMP1-207ENST00000621999 TYW1BQ6NUM6 668 aa13.99□□□□□ -0.17
SCAMP1-207ENST00000621999 GRAMD1CQ8IYS0 662 aa13.99□□□□□ -0.17
SCAMP1-207ENST00000621999 CCDC102AQ96A19 550 aa13.99□□□□□ -0.17
SCAMP1-207ENST00000621999 USP25Q9UHP3 1055 aa13.99□□□□□ -0.17
SCAMP1-207ENST00000621999 RGMBQ6NW40 437 aa13.99□□□□□ -0.17
SCAMP1-207ENST00000621999 GPBP1Q86WP2 473 aa13.99□□□□□ -0.17
SCAMP1-207ENST00000621999 DHX37Q8IY37 1157 aaKnown RBP13.99□□□□□ -0.17
SCAMP1-207ENST00000621999 AOPEPQ8N6M6 819 aa13.99□□□□□ -0.17
SCAMP1-207ENST00000621999 IPO5O00410 1097 aaKnown RBP13.98□□□□□ -0.17
SCAMP1-207ENST00000621999 USP11P51784 963 aa13.98□□□□□ -0.17
SCAMP1-207ENST00000621999 TREML2Q5T2D2 321 aa13.98□□□□□ -0.17
SCAMP1-207ENST00000621999 KRBA2Q6ZNG9 492 aa13.98□□□□□ -0.17
SCAMP1-207ENST00000621999 L3MBTL3Q96JM7 780 aaPredicted RBP13.98□□□□□ -0.17
SCAMP1-207ENST00000621999 SPATC1LQ9H0A9 340 aa13.98□□□□□ -0.17
SCAMP1-207ENST00000621999 KDM3AQ9Y4C1 1321 aa13.98□□□□□ -0.17
SCAMP1-207ENST00000621999 RREB1Q92766 1687 aa13.98□□□□□ -0.17
SCAMP1-207ENST00000621999 SLC25A27O95847 323 aa13.98□□□□□ -0.17
SCAMP1-207ENST00000621999 CTTNQ14247 550 aaKnown RBP13.98□□□□□ -0.17
SCAMP1-207ENST00000621999 ARHGEF6Q15052 776 aa13.98□□□□□ -0.17
SCAMP1-207ENST00000621999 CCDC40Q4G0X9 1142 aa13.98□□□□□ -0.17
SCAMP1-207ENST00000621999 FAM47CQ5HY64 1035 aa13.98□□□□□ -0.17
SCAMP1-207ENST00000621999 ARL6IP4Q66PJ3 421 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms