RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 ORC3Q9UBD5 711 aaPredicted RBP21.35■■□□□ 1.01
CIRBP-245ENST00000621399 ZHX1Q9UKY1 873 aaPredicted RBP21.35■■□□□ 1.01
CIRBP-245ENST00000621399 CENPFP49454 3210 aa21.35■■□□□ 1.01
CIRBP-245ENST00000621399 EIF2AK2P19525 551 aaKnown RBP21.34■■□□□ 1.01
CIRBP-245ENST00000621399 PDE4DQ08499 809 aa21.34■■□□□ 1.01
CIRBP-245ENST00000621399 ACVR2BQ13705 512 aa21.34■■□□□ 1.01
CIRBP-245ENST00000621399 UBE2SQ16763 222 aa21.34■■□□□ 1.01
CIRBP-245ENST00000621399 NSUN7Q8NE18 718 aaKnown RBP21.34■■□□□ 1.01
CIRBP-245ENST00000621399 CCDC148Q8NFR7 591 aa21.34■■□□□ 1.01
CIRBP-245ENST00000621399 MORC4Q8TE76 937 aa21.34■■□□□ 1.01
CIRBP-245ENST00000621399 WASF1Q92558 559 aa21.34■■□□□ 1.01
CIRBP-245ENST00000621399 GLT8D2Q9H1C3 349 aa21.34■■□□□ 1.01
CIRBP-245ENST00000621399 ABHD16BQ9H3Z7 469 aa21.34■■□□□ 1.01
CIRBP-245ENST00000621399 C6orf50Q9HD87 102 aa21.34■■□□□ 1.01
CIRBP-245ENST00000621399 SH3GLB2Q9NR46 395 aa21.34■■□□□ 1.01
CIRBP-245ENST00000621399 PXMP2Q9NR77 195 aa21.34■■□□□ 1.01
CIRBP-245ENST00000621399 VPS54Q9P1Q0 977 aa21.34■■□□□ 1.01
CIRBP-245ENST00000621399 JAK2O60674 1132 aa21.33■■□□□ 1.01
CIRBP-245ENST00000621399 EEPD1Q7L9B9 569 aa21.33■■□□□ 1.01
CIRBP-245ENST00000621399 TMX3Q96JJ7 454 aa21.33■■□□□ 1.01
CIRBP-245ENST00000621399 AIFM3Q96NN9 605 aa21.33■■□□□ 1.01
CIRBP-245ENST00000621399 DEFB118Q96PH6 123 aa21.33■■□□□ 1.01
CIRBP-245ENST00000621399 IWS1Q96ST2 819 aa21.33■■□□□ 1.01
CIRBP-245ENST00000621399 LLPHQ9BRT6 129 aaKnown RBP21.33■■□□□ 1.01
CIRBP-245ENST00000621399 PAK6Q9NQU5 681 aaPredicted RBP21.33■■□□□ 1.01
CIRBP-245ENST00000621399 ESYT2A0FGR8 921 aa21.32■■□□□ 1
CIRBP-245ENST00000621399 GJB1P08034 283 aa21.32■■□□□ 1
CIRBP-245ENST00000621399 ZNF865P0CJ78 1059 aaPredicted RBP21.32■■□□□ 1
CIRBP-245ENST00000621399 EDNRBP24530 442 aa21.32■■□□□ 1
CIRBP-245ENST00000621399 GNA11P29992 359 aa21.32■■□□□ 1
CIRBP-245ENST00000621399 NLRP5P59047 1200 aa21.32■■□□□ 1
CIRBP-245ENST00000621399 TEX2Q8IWB9 1127 aa21.32■■□□□ 1
CIRBP-245ENST00000621399 ZMYND12Q9H0C1 365 aa21.32■■□□□ 1
CIRBP-245ENST00000621399 PLXNA1Q9UIW2 1896 aa21.32■■□□□ 1
CIRBP-245ENST00000621399 SPDYE3A6NKU9 549 aa21.31■■□□□ 1
CIRBP-245ENST00000621399 SEPT4O43236 478 aa21.31■■□□□ 1
CIRBP-245ENST00000621399 NR3C2P08235 984 aa21.31■■□□□ 1
CIRBP-245ENST00000621399 FDPSP14324 419 aaKnown RBP21.31■■□□□ 1
CIRBP-245ENST00000621399 FBXO16Q8IX29 292 aaPredicted RBP21.31■■□□□ 1
CIRBP-245ENST00000621399 PDCD2LQ9BRP1 358 aa21.31■■□□□ 1
CIRBP-245ENST00000621399 ALG1Q9BT22 464 aa21.31■■□□□ 1
CIRBP-245ENST00000621399 VTA1Q9NP79 307 aa21.31■■□□□ 1
CIRBP-245ENST00000621399 DDX20Q9UHI6 824 aaKnown RBP21.31■■□□□ 1
CIRBP-245ENST00000621399 MYCLP12524 364 aaPredicted RBP21.3■■□□□ 1
CIRBP-245ENST00000621399 XBP1P17861 261 aa21.3■■□□□ 1
CIRBP-245ENST00000621399 RGS19P49795 217 aa21.3■■□□□ 1
CIRBP-245ENST00000621399 PGM5Q15124 567 aa21.3■■□□□ 1
CIRBP-245ENST00000621399 STXBP2Q15833 593 aa21.3■■□□□ 1
CIRBP-245ENST00000621399 BICD2Q8TD16 824 aa21.3■■□□□ 1
CIRBP-245ENST00000621399 SHISA4Q96DD7 197 aa21.3■■□□□ 1
CIRBP-245ENST00000621399 KATNBL1Q9H079 304 aa21.3■■□□□ 1
CIRBP-245ENST00000621399 FAM184BQ9ULE4 1060 aa21.3■■□□□ 1
CIRBP-245ENST00000621399 PCDHA6Q9UN73 950 aa21.3■■□□□ 1
CIRBP-245ENST00000621399 PCDHA8Q9Y5H6 950 aa21.3■■□□□ 1
CIRBP-245ENST00000621399 RBBP6Q7Z6E9 1792 aaKnown RBP21.29■■□□□ 1
CIRBP-245ENST00000621399 MSCO60682 206 aa21.29■■□□□ 1
CIRBP-245ENST00000621399 FOSP01100 380 aaPredicted RBP21.29■■□□□ 1
CIRBP-245ENST00000621399 AKR1A1P14550 325 aa21.29■■□□□ 1
CIRBP-245ENST00000621399 SOX10P56693 466 aa21.29■■□□□ 1
CIRBP-245ENST00000621399 CCDC144BQ3MJ40 725 aa21.29■■□□□ 1
CIRBP-245ENST00000621399 FAM177A1Q8N128 213 aaPredicted RBP21.29■■□□□ 1
CIRBP-245ENST00000621399 U2AF1L4Q8WU68 220 aaKnown RBP21.29■■□□□ 1
CIRBP-245ENST00000621399 TMEM260Q9NX78 707 aa21.29■■□□□ 1
CIRBP-245ENST00000621399 POTEFA5A3E0 1075 aa21.28■■□□□ 1
CIRBP-245ENST00000621399 EIF3JO75822 258 aaKnown RBP21.28■■□□□ 1
CIRBP-245ENST00000621399 SGPL1O95470 568 aa21.28■■□□□ 1
CIRBP-245ENST00000621399 TFRCP02786 760 aaKnown RBP21.28■■□□□ 1
CIRBP-245ENST00000621399 CCND2P30279 289 aa21.28■■□□□ 1
CIRBP-245ENST00000621399 GJA8P48165 433 aa21.28■■□□□ 1
CIRBP-245ENST00000621399 JAKMIP3Q5VZ66 844 aa21.28■■□□□ 1
CIRBP-245ENST00000621399 ANO1Q5XXA6 986 aa21.28■■□□□ 1
CIRBP-245ENST00000621399 TAPT1Q6NXT6 567 aa21.28■■□□□ 1
CIRBP-245ENST00000621399 VSIG10LQ86VR7 867 aa21.28■■□□□ 1
CIRBP-245ENST00000621399 REXO1Q8N1G1 1221 aaKnown RBP21.28■■□□□ 1
CIRBP-245ENST00000621399 IL31RAQ8NI17 732 aa21.28■■□□□ 1
CIRBP-245ENST00000621399 EHMT1Q9H9B1 1298 aa21.28■■□□□ 1
CIRBP-245ENST00000621399 PDGFCQ9NRA1 345 aa21.28■■□□□ 1
CIRBP-245ENST00000621399 KCNJ14Q9UNX9 436 aa21.28■■□□□ 1
CIRBP-245ENST00000621399 FRMPD4Q14CM0 1322 aa21.28■■□□□ 1
CIRBP-245ENST00000621399 LCTP09848 1927 aa21.27■■□□□ 1
CIRBP-245ENST00000621399 ADCYAP1R1P41586 468 aa21.27■■□□□ 1
CIRBP-245ENST00000621399 CLK2P49760 499 aaKnown RBP21.27■■□□□ 1
CIRBP-245ENST00000621399 HMGN5P82970 282 aaKnown RBP21.27■■□□□ 1
CIRBP-245ENST00000621399 MLLT1Q03111 559 aaPredicted RBP21.27■■□□□ 1
CIRBP-245ENST00000621399 AP3B2Q13367 1082 aa21.27■■□□□ 1
CIRBP-245ENST00000621399 LHX8Q68G74 356 aa21.27■■□□□ 1
CIRBP-245ENST00000621399 MCTP2Q6DN12 878 aa21.27■■□□□ 1
CIRBP-245ENST00000621399 GJB4Q9NTQ9 266 aa21.27■■□□□ 1
CIRBP-245ENST00000621399 PCDHA4Q9UN74 947 aa21.27■■□□□ 1
CIRBP-245ENST00000621399 ADAMTS3O15072 1205 aa21.26■□□□□ 0.99
CIRBP-245ENST00000621399 RARBP10826 455 aa21.26■□□□□ 0.99
CIRBP-245ENST00000621399 TNFAIP2Q03169 654 aa21.26■□□□□ 0.99
CIRBP-245ENST00000621399 IQSEC1Q6DN90 963 aa21.26■□□□□ 0.99
CIRBP-245ENST00000621399 GALNT17Q6IS24 598 aa21.26■□□□□ 0.99
CIRBP-245ENST00000621399 XRRA1Q6P2D8 792 aa21.26■□□□□ 0.99
CIRBP-245ENST00000621399 SEPT14Q6ZU15 432 aa21.26■□□□□ 0.99
CIRBP-245ENST00000621399 FAM184AQ8NB25 1140 aa21.26■□□□□ 0.99
CIRBP-245ENST00000621399 ZFP91Q96JP5 570 aaPredicted RBP21.26■□□□□ 0.99
CIRBP-245ENST00000621399 PGBD1Q96JS3 809 aa21.26■□□□□ 0.99
CIRBP-245ENST00000621399 ANO3Q9BYT9 981 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms