RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 ZNF280CQ8ND82 737 aa14.32□□□□□ -0.12
TNFAIP3-209ENST00000619035 TBC1D5Q92609 795 aa14.32□□□□□ -0.12
TNFAIP3-209ENST00000619035 CCSER1Q9C0I3 900 aa14.32□□□□□ -0.12
TNFAIP3-209ENST00000619035 LRWD1Q9UFC0 647 aa14.32□□□□□ -0.12
TNFAIP3-209ENST00000619035 CCPG1Q9ULG6 757 aa14.32□□□□□ -0.12
TNFAIP3-209ENST00000619035 FOSP01100 380 aaPredicted RBP14.31□□□□□ -0.12
TNFAIP3-209ENST00000619035 SARSP49591 514 aaKnown RBP14.31□□□□□ -0.12
TNFAIP3-209ENST00000619035 HMGCS2P54868 508 aa14.31□□□□□ -0.12
TNFAIP3-209ENST00000619035 BACE1P56817 501 aa14.31□□□□□ -0.12
TNFAIP3-209ENST00000619035 DPYDQ12882 1025 aa14.31□□□□□ -0.12
TNFAIP3-209ENST00000619035 NT5DC1Q5TFE4 455 aa14.31□□□□□ -0.12
TNFAIP3-209ENST00000619035 IGSF22Q8N9C0 903 aa14.31□□□□□ -0.12
TNFAIP3-209ENST00000619035 BPIFA3Q9BQP9 254 aa14.31□□□□□ -0.12
TNFAIP3-209ENST00000619035 MRPL11Q9Y3B7 192 aaKnown RBP14.31□□□□□ -0.12
TNFAIP3-209ENST00000619035 SMCHD1A6NHR9 2005 aa14.31□□□□□ -0.12
TNFAIP3-209ENST00000619035 POLR2AP24928 1970 aaKnown RBP14.31□□□□□ -0.12
TNFAIP3-209ENST00000619035 FDX1P10109 184 aa14.31□□□□□ -0.12
TNFAIP3-209ENST00000619035 ATP1A3P13637 1013 aa14.31□□□□□ -0.12
TNFAIP3-209ENST00000619035 PLCG1P19174 1290 aa14.31□□□□□ -0.12
TNFAIP3-209ENST00000619035 USP11P51784 963 aa14.31□□□□□ -0.12
TNFAIP3-209ENST00000619035 HSP90AA4PQ58FG1 418 aa14.31□□□□□ -0.12
TNFAIP3-209ENST00000619035 HAS1Q92839 578 aa14.31□□□□□ -0.12
TNFAIP3-209ENST00000619035 MTRQ99707 1265 aa14.31□□□□□ -0.12
TNFAIP3-209ENST00000619035 RAB34Q9BZG1 259 aa14.31□□□□□ -0.12
TNFAIP3-209ENST00000619035 SCN4AP35499 1836 aa14.31□□□□□ -0.12
TNFAIP3-209ENST00000619035 C19orf81C9J6K1 198 aa14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 GCOM1H8Y6P7 765 aaPredicted RBP14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 PIK3CDO00329 1044 aa14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 POLR2MP0CAP2 368 aa14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 FXR2P51116 673 aaKnown RBP eCLIP14.3□□□□□ -0.123e-6■□□□□ 10.5
TNFAIP3-209ENST00000619035 CUL4BQ13620 913 aa14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 MORC3Q14149 939 aa14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 NOLC1Q14978 699 aaKnown RBP eCLIP14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 PRR16Q569H4 304 aa14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 NAALADL2Q58DX5 795 aa14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 FILIP1Q7Z7B0 1213 aa14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 SPATA20Q8TB22 786 aa14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 HSD3B7Q9H2F3 369 aa14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 HOMER2Q9NSB8 354 aa14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 R3HCC1Q9Y3T6 440 aaKnown RBP14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 CTDP1Q9Y5B0 961 aaPredicted RBP14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 ABCB11O95342 1321 aa14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 GLTPD2A6NH11 291 aa14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 ICAM1P05362 532 aa14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 ZNF76P36508 570 aa14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 SREBF1P36956 1147 aa14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 UBXN2AP68543 259 aa14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 PTPN21Q16825 1174 aa14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 KRT26Q7Z3Y9 468 aa14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 TRIML1Q8N9V2 468 aa14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 CACTINQ8WUQ7 758 aaKnown RBP14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 CALML4Q96GE6 196 aa14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 RAVER2Q9HCJ3 691 aaKnown RBP14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 IFNKQ9P0W0 207 aa14.3□□□□□ -0.12
TNFAIP3-209ENST00000619035 SMTNL1A8MU46 457 aa14.29□□□□□ -0.12
TNFAIP3-209ENST00000619035 ZNF536O15090 1300 aa14.29□□□□□ -0.12
TNFAIP3-209ENST00000619035 USP2O75604 605 aaPredicted RBP14.29□□□□□ -0.12
TNFAIP3-209ENST00000619035 TPM4P67936 248 aa14.29□□□□□ -0.12
TNFAIP3-209ENST00000619035 MOXD1Q6UVY6 613 aa14.29□□□□□ -0.12
TNFAIP3-209ENST00000619035 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.29□□□□□ -0.12
TNFAIP3-209ENST00000619035 LRRC15Q8TF66 581 aa14.29□□□□□ -0.12
TNFAIP3-209ENST00000619035 MRFAP1L1Q96HT8 127 aa14.29□□□□□ -0.12
TNFAIP3-209ENST00000619035 CDK5RAP3Q96JB5 506 aa14.29□□□□□ -0.12
TNFAIP3-209ENST00000619035 C12orf42Q96LP6 360 aa14.29□□□□□ -0.12
TNFAIP3-209ENST00000619035 GSDMAQ96QA5 445 aa14.29□□□□□ -0.12
TNFAIP3-209ENST00000619035 MMTAG2Q9BU76 263 aaKnown RBP14.29□□□□□ -0.12
TNFAIP3-209ENST00000619035 XPO4Q9C0E2 1151 aaKnown RBP14.29□□□□□ -0.12
TNFAIP3-209ENST00000619035 PPP1R9AQ9ULJ8 1098 aa14.29□□□□□ -0.12
TNFAIP3-209ENST00000619035 PCDHA12Q9UN75 941 aa14.29□□□□□ -0.12
TNFAIP3-209ENST00000619035 IQCA1LA6NCM1 817 aa14.29□□□□□ -0.12
TNFAIP3-209ENST00000619035 FAM86B1E9PN63 330 aa14.29□□□□□ -0.12
TNFAIP3-209ENST00000619035 GTPBP6O43824 516 aaPredicted RBP14.29□□□□□ -0.12
TNFAIP3-209ENST00000619035 FAM86B2P0C5J1 330 aa14.29□□□□□ -0.12
TNFAIP3-209ENST00000619035 ALAS1P13196 640 aa14.29□□□□□ -0.12
TNFAIP3-209ENST00000619035 DHX8Q14562 1220 aaKnown RBP14.29□□□□□ -0.12
TNFAIP3-209ENST00000619035 SMYD4Q8IYR2 804 aaPredicted RBP14.29□□□□□ -0.12
TNFAIP3-209ENST00000619035 KIAA1524Q8TCG1 905 aa14.29□□□□□ -0.12
TNFAIP3-209ENST00000619035 SNX29Q8TEQ0 813 aa14.29□□□□□ -0.12
TNFAIP3-209ENST00000619035 CRYGNQ8WXF5 182 aa14.29□□□□□ -0.12
TNFAIP3-209ENST00000619035 DACH1Q9UI36 760 aa14.29□□□□□ -0.12
TNFAIP3-209ENST00000619035 PPP1R12BO60237 982 aaPredicted RBP14.28□□□□□ -0.12
TNFAIP3-209ENST00000619035 CDC25BP30305 580 aa14.28□□□□□ -0.12
TNFAIP3-209ENST00000619035 EPHX2P34913 555 aa14.28□□□□□ -0.12
TNFAIP3-209ENST00000619035 MYL5Q02045 173 aa14.28□□□□□ -0.12
TNFAIP3-209ENST00000619035 VGLL4Q14135 290 aa14.28□□□□□ -0.12
TNFAIP3-209ENST00000619035 EAPPQ56P03 285 aaPredicted RBP14.28□□□□□ -0.12
TNFAIP3-209ENST00000619035 KRT79Q5XKE5 535 aa14.28□□□□□ -0.12
TNFAIP3-209ENST00000619035 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.28□□□□□ -0.12
TNFAIP3-209ENST00000619035 MLKLQ8NB16 471 aa14.28□□□□□ -0.12
TNFAIP3-209ENST00000619035 SLC38A10Q9HBR0 1119 aa14.28□□□□□ -0.12
TNFAIP3-209ENST00000619035 CYP3A7-CYP3A51PA0A087WV96 503 aa14.27□□□□□ -0.12
TNFAIP3-209ENST00000619035 NFIBO00712 420 aa14.27□□□□□ -0.12
TNFAIP3-209ENST00000619035 CYP3A7P24462 503 aa14.27□□□□□ -0.12
TNFAIP3-209ENST00000619035 FMR1Q06787 632 aaKnown RBP eCLIP14.27□□□□□ -0.12
TNFAIP3-209ENST00000619035 PDIA5Q14554 519 aa14.27□□□□□ -0.12
TNFAIP3-209ENST00000619035 KLHL10Q6JEL2 608 aa14.27□□□□□ -0.12
TNFAIP3-209ENST00000619035 TRMT44Q8IYL2 757 aaKnown RBP14.27□□□□□ -0.12
TNFAIP3-209ENST00000619035 SAMD3Q8N6K7 520 aa14.27□□□□□ -0.12
TNFAIP3-209ENST00000619035 ATG4CQ96DT6 458 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms