RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 ARHGAP23Q9P227 1491 aa15.3■□□□□ 0.04
CNOT3-210ENST00000618939 PP2D1A8MPX8 630 aa15.3■□□□□ 0.04
CNOT3-210ENST00000618939 KCNQ2O43526 872 aa15.3■□□□□ 0.04
CNOT3-210ENST00000618939 CAMTA2O94983 1202 aa15.3■□□□□ 0.04
CNOT3-210ENST00000618939 ZRSR2Q15696 482 aaKnown RBP15.3■□□□□ 0.04
CNOT3-210ENST00000618939 UBE2SQ16763 222 aa15.3■□□□□ 0.04
CNOT3-210ENST00000618939 PTPROQ16827 1216 aa15.3■□□□□ 0.04
CNOT3-210ENST00000618939 KIFAP3Q92845 792 aa15.3■□□□□ 0.04
CNOT3-210ENST00000618939 AMFRQ9UKV5 643 aa15.3■□□□□ 0.04
CNOT3-210ENST00000618939 EHHADHQ08426 723 aa15.3■□□□□ 0.04
CNOT3-210ENST00000618939 BIRC3Q13489 604 aa15.3■□□□□ 0.04
CNOT3-210ENST00000618939 ABCB4P21439 1286 aa15.29■□□□□ 0.04
CNOT3-210ENST00000618939 MTF1Q14872 753 aa15.29■□□□□ 0.04
CNOT3-210ENST00000618939 TERF2Q15554 542 aa15.29■□□□□ 0.04
CNOT3-210ENST00000618939 TMC4Q7Z404 712 aa15.29■□□□□ 0.04
CNOT3-210ENST00000618939 FAM178BQ8IXR5 827 aa15.29■□□□□ 0.04
CNOT3-210ENST00000618939 WDR24Q96S15 920 aa15.29■□□□□ 0.04
CNOT3-210ENST00000618939 SYNCQ9H7C4 482 aa15.29■□□□□ 0.04
CNOT3-210ENST00000618939 EXOC7Q9UPT5 735 aa15.29■□□□□ 0.04
CNOT3-210ENST00000618939 MYCLP12524 364 aaPredicted RBP15.29■□□□□ 0.04
CNOT3-210ENST00000618939 ACTN2P35609 894 aa15.29■□□□□ 0.04
CNOT3-210ENST00000618939 LRRC63Q05C16 580 aa15.29■□□□□ 0.04
CNOT3-210ENST00000618939 PTPAQ15257 358 aa15.29■□□□□ 0.04
CNOT3-210ENST00000618939 ABCB5Q2M3G0 1257 aa15.29■□□□□ 0.04
CNOT3-210ENST00000618939 FNBP4Q8N3X1 1017 aaPredicted RBP15.29■□□□□ 0.04
CNOT3-210ENST00000618939 ANKRD7Q92527 254 aa15.29■□□□□ 0.04
CNOT3-210ENST00000618939 FNBP1Q96RU3 617 aa15.29■□□□□ 0.04
CNOT3-210ENST00000618939 FAM184BQ9ULE4 1060 aa15.29■□□□□ 0.04
CNOT3-210ENST00000618939 JRKLQ9Y4A0 524 aa15.29■□□□□ 0.04
CNOT3-210ENST00000618939 A0A1B0GTH6 734 aa15.29■□□□□ 0.04
CNOT3-210ENST00000618939 CTIFO43310 598 aaKnown RBP15.29■□□□□ 0.04
CNOT3-210ENST00000618939 DLGAP5Q15398 846 aa15.29■□□□□ 0.04
CNOT3-210ENST00000618939 LARGE2Q8N3Y3 721 aa15.29■□□□□ 0.04
CNOT3-210ENST00000618939 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.29■□□□□ 0.04
CNOT3-210ENST00000618939 PLCB3Q01970 1234 aa15.29■□□□□ 0.04
CNOT3-210ENST00000618939 PSMD2Q13200 908 aa15.29■□□□□ 0.04
CNOT3-210ENST00000618939 CC2D1AQ6P1N0 951 aaPredicted RBP15.29■□□□□ 0.04
CNOT3-210ENST00000618939 KANSL2Q9H9L4 492 aa15.29■□□□□ 0.04
CNOT3-210ENST00000618939 ABCB6Q9NP58 842 aa15.29■□□□□ 0.04
CNOT3-210ENST00000618939 BARHL2Q9NY43 387 aa15.29■□□□□ 0.04
CNOT3-210ENST00000618939 FAN1Q9Y2M0 1017 aa15.29■□□□□ 0.04
CNOT3-210ENST00000618939 RABGAP1Q9Y3P9 1069 aa15.29■□□□□ 0.04
CNOT3-210ENST00000618939 KIF11P52732 1056 aa15.28■□□□□ 0.04
CNOT3-210ENST00000618939 GRIN1Q05586 938 aa15.28■□□□□ 0.04
CNOT3-210ENST00000618939 SF3B3Q15393 1217 aaKnown RBP15.28■□□□□ 0.04
CNOT3-210ENST00000618939 TXNRD1Q16881 649 aa15.28■□□□□ 0.04
CNOT3-210ENST00000618939 PPIP5K2O43314 1243 aa15.28■□□□□ 0.04
CNOT3-210ENST00000618939 TTLL12Q14166 644 aaPredicted RBP15.28■□□□□ 0.04
CNOT3-210ENST00000618939 NYAP1Q6ZVC0 841 aa15.28■□□□□ 0.04
CNOT3-210ENST00000618939 STAG2Q8N3U4 1231 aa15.28■□□□□ 0.04
CNOT3-210ENST00000618939 FAM204AQ9H8W3 233 aa15.28■□□□□ 0.04
CNOT3-210ENST00000618939 CD209Q9NNX6 404 aa15.28■□□□□ 0.04
CNOT3-210ENST00000618939 PNMA6FA0A0J9YX94 578 aa15.28■□□□□ 0.04
CNOT3-210ENST00000618939 FAM170AA1A519 330 aa15.28■□□□□ 0.04
CNOT3-210ENST00000618939 WDR44Q5JSH3 913 aa15.28■□□□□ 0.04
CNOT3-210ENST00000618939 UNC13DQ70J99 1090 aa15.28■□□□□ 0.04
CNOT3-210ENST00000618939 CCDC114Q96M63 670 aa15.28■□□□□ 0.04
CNOT3-210ENST00000618939 PAIP2Q9BPZ3 127 aaKnown RBP15.28■□□□□ 0.04
CNOT3-210ENST00000618939 EPC1Q9H2F5 836 aa15.28■□□□□ 0.04
CNOT3-210ENST00000618939 TTC26A0AVF1 554 aa15.27■□□□□ 0.04
CNOT3-210ENST00000618939 USP17L5A8MUK1 530 aa15.27■□□□□ 0.04
CNOT3-210ENST00000618939 KRIT1O00522 736 aa15.27■□□□□ 0.04
CNOT3-210ENST00000618939 POLR2MP0CAP2 368 aa15.27■□□□□ 0.04
CNOT3-210ENST00000618939 CASP8Q14790 479 aa15.27■□□□□ 0.04
CNOT3-210ENST00000618939 SEPT2Q15019 361 aa15.27■□□□□ 0.04
CNOT3-210ENST00000618939 NSMFQ6X4W1 530 aa15.27■□□□□ 0.04
CNOT3-210ENST00000618939 SUPT20HQ8NEM7 779 aa15.27■□□□□ 0.04
CNOT3-210ENST00000618939 HOMER2Q9NSB8 354 aa15.27■□□□□ 0.04
CNOT3-210ENST00000618939 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.27■□□□□ 0.04
CNOT3-210ENST00000618939 UBE2Q2LH0YL09 131 aa15.27■□□□□ 0.04
CNOT3-210ENST00000618939 MOCS3O95396 460 aa15.27■□□□□ 0.04
CNOT3-210ENST00000618939 NTSR2O95665 410 aa15.27■□□□□ 0.04
CNOT3-210ENST00000618939 EZRP15311 586 aaKnown RBP15.27■□□□□ 0.04
CNOT3-210ENST00000618939 GUCY2DQ02846 1103 aa15.27■□□□□ 0.04
CNOT3-210ENST00000618939 MTMR3Q13615 1198 aa15.27■□□□□ 0.04
CNOT3-210ENST00000618939 NLGN1Q8N2Q7 840 aa15.27■□□□□ 0.04
CNOT3-210ENST00000618939 GOLGA5Q8TBA6 731 aa15.27■□□□□ 0.04
CNOT3-210ENST00000618939 MORC2Q9Y6X9 1032 aaPredicted RBP15.27■□□□□ 0.04
CNOT3-210ENST00000618939 NWD1Q149M9 1564 aa15.27■□□□□ 0.04
CNOT3-210ENST00000618939 ATP2A1O14983 1001 aa15.27■□□□□ 0.03
CNOT3-210ENST00000618939 TADA3O75528 432 aa15.27■□□□□ 0.03
CNOT3-210ENST00000618939 CXCR5P32302 372 aa15.27■□□□□ 0.03
CNOT3-210ENST00000618939 C12orf60Q5U649 245 aa15.27■□□□□ 0.03
CNOT3-210ENST00000618939 MIER3Q7Z3K6 550 aa15.27■□□□□ 0.03
CNOT3-210ENST00000618939 FAM212AQ96EL1 285 aa15.27■□□□□ 0.03
CNOT3-210ENST00000618939 CEP95Q96GE4 821 aa15.27■□□□□ 0.03
CNOT3-210ENST00000618939 EMILIN3Q9NT22 766 aa15.27■□□□□ 0.03
CNOT3-210ENST00000618939 BZW2Q9Y6E2 419 aaKnown RBP15.27■□□□□ 0.03
CNOT3-210ENST00000618939 VIRMAQ69YN4 1812 aaKnown RBP15.27■□□□□ 0.03
CNOT3-210ENST00000618939 GOLGA8KD6RF30 607 aa15.27■□□□□ 0.03
CNOT3-210ENST00000618939 GNGT1P63211 74 aa15.27■□□□□ 0.03
CNOT3-210ENST00000618939 KRT71Q3SY84 523 aa15.27■□□□□ 0.03
CNOT3-210ENST00000618939 PCDHA13Q9Y5I0 950 aa15.27■□□□□ 0.03
CNOT3-210ENST00000618939 MRFAP1Q9Y605 127 aa15.27■□□□□ 0.03
CNOT3-210ENST00000618939 POTEMA6NI47 508 aa15.26■□□□□ 0.03
CNOT3-210ENST00000618939 PLA2G4BP0C869 781 aa15.26■□□□□ 0.03
CNOT3-210ENST00000618939 HOXA7P31268 230 aaPredicted RBP15.26■□□□□ 0.03
CNOT3-210ENST00000618939 PPARDQ03181 441 aa15.26■□□□□ 0.03
CNOT3-210ENST00000618939 C2orf54Q08AI8 447 aa15.26■□□□□ 0.03
CNOT3-210ENST00000618939 MRPL11Q9Y3B7 192 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms