RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 TECP42680 631 aa14.55□□□□□ -0.08
MSH6-214ENST00000616033 MYCBPAPQ8TBZ2 947 aa14.55□□□□□ -0.08
MSH6-214ENST00000616033 ZNF507Q8TCN5 953 aa14.55□□□□□ -0.08
MSH6-214ENST00000616033 LPIN2Q92539 896 aa14.55□□□□□ -0.08
MSH6-214ENST00000616033 SH3GL2Q99962 352 aa14.55□□□□□ -0.08
MSH6-214ENST00000616033 GOPCQ9HD26 462 aa14.55□□□□□ -0.08
MSH6-214ENST00000616033 PALMO75781 387 aa14.55□□□□□ -0.08
MSH6-214ENST00000616033 SRGNP10124 158 aa14.55□□□□□ -0.08
MSH6-214ENST00000616033 PLCG1P19174 1290 aa14.55□□□□□ -0.08
MSH6-214ENST00000616033 RBM5P52756 815 aaKnown RBP eCLIP14.55□□□□□ -0.08
MSH6-214ENST00000616033 CPLX4Q7Z7G2 160 aa14.55□□□□□ -0.08
MSH6-214ENST00000616033 CCDC113Q9H0I3 377 aa14.55□□□□□ -0.08
MSH6-214ENST00000616033 SH2D4AQ9H788 454 aa14.55□□□□□ -0.08
MSH6-214ENST00000616033 SLC40A1Q9NP59 571 aa14.55□□□□□ -0.08
MSH6-214ENST00000616033 TNS3Q68CZ2 1445 aa14.55□□□□□ -0.08
MSH6-214ENST00000616033 PHF20L1A8MW92 1017 aa14.54□□□□□ -0.08
MSH6-214ENST00000616033 SCG2P13521 617 aa14.54□□□□□ -0.08
MSH6-214ENST00000616033 EEF1GP26641 437 aaKnown RBP14.54□□□□□ -0.08
MSH6-214ENST00000616033 CFAP221Q4G0U5 840 aa14.54□□□□□ -0.08
MSH6-214ENST00000616033 SWT1Q5T5J6 900 aaKnown RBP14.54□□□□□ -0.08
MSH6-214ENST00000616033 CHADLQ6NUI6 762 aa14.54□□□□□ -0.08
MSH6-214ENST00000616033 PNMA8AQ86V59 439 aaPredicted RBP14.54□□□□□ -0.08
MSH6-214ENST00000616033 KSR1Q8IVT5 923 aa14.54□□□□□ -0.08
MSH6-214ENST00000616033 CCDC47Q96A33 483 aaKnown RBP14.54□□□□□ -0.08
MSH6-214ENST00000616033 DUSP9Q99956 384 aaKnown RBP14.54□□□□□ -0.08
MSH6-214ENST00000616033 EPN3Q9H201 632 aa14.54□□□□□ -0.08
MSH6-214ENST00000616033 VEZTQ9HBM0 779 aa14.54□□□□□ -0.08
MSH6-214ENST00000616033 GBP2P32456 591 aaPredicted RBP14.54□□□□□ -0.08
MSH6-214ENST00000616033 DZIP3Q86Y13 1208 aaKnown RBP14.54□□□□□ -0.08
MSH6-214ENST00000616033 P2RX5Q93086 422 aa14.54□□□□□ -0.08
MSH6-214ENST00000616033 DPH5Q9H2P9 285 aa14.54□□□□□ -0.08
MSH6-214ENST00000616033 C4AP0C0L4 1744 aa14.54□□□□□ -0.08
MSH6-214ENST00000616033 C4BP0C0L5 1744 aa14.54□□□□□ -0.08
MSH6-214ENST00000616033 KCNK3O14649 394 aa14.54□□□□□ -0.08
MSH6-214ENST00000616033 UPP2O95045 317 aa14.54□□□□□ -0.08
MSH6-214ENST00000616033 BMP15O95972 392 aa14.54□□□□□ -0.08
MSH6-214ENST00000616033 FECHP22830 423 aa14.54□□□□□ -0.08
MSH6-214ENST00000616033 PTGISQ16647 500 aa14.54□□□□□ -0.08
MSH6-214ENST00000616033 EMBQ6PCB8 327 aa14.54□□□□□ -0.08
MSH6-214ENST00000616033 NLRP10Q86W26 655 aa14.54□□□□□ -0.08
MSH6-214ENST00000616033 CASKIN2Q8WXE0 1202 aa14.54□□□□□ -0.08
MSH6-214ENST00000616033 TMOD3Q9NYL9 352 aa14.54□□□□□ -0.08
MSH6-214ENST00000616033 BIN2Q9UBW5 565 aaPredicted RBP14.54□□□□□ -0.08
MSH6-214ENST00000616033 PDS5AQ29RF7 1337 aaKnown RBP14.54□□□□□ -0.08
MSH6-214ENST00000616033 PRPF3O43395 683 aaKnown RBP14.53□□□□□ -0.08
MSH6-214ENST00000616033 AP1G2O75843 785 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 TCP1P17987 556 aaKnown RBP14.53□□□□□ -0.08
MSH6-214ENST00000616033 CTNNA1P35221 906 aaKnown RBP14.53□□□□□ -0.08
MSH6-214ENST00000616033 SNX1Q13596 522 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 RAPGEF1Q13905 1077 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 QPCTQ16769 361 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 NAALADL2Q58DX5 795 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 TTI2Q6NXR4 508 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 STAG2Q8N3U4 1231 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 FNBP4Q8N3X1 1017 aaPredicted RBP14.53□□□□□ -0.08
MSH6-214ENST00000616033 MMGT1Q8N4V1 131 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 MDM1Q8TC05 714 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 NOX5Q96PH1 765 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 NOVA2Q9UNW9 492 aaKnown RBP14.53□□□□□ -0.08
MSH6-214ENST00000616033 ANO9A1A5B4 782 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 CEP104O60308 925 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 KIF4AO95239 1232 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 PAK2Q13177 524 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 PRPF4BQ13523 1007 aaKnown RBP14.53□□□□□ -0.08
MSH6-214ENST00000616033 MARCH10Q8NA82 808 aaPredicted RBP14.53□□□□□ -0.08
MSH6-214ENST00000616033 TLR10Q9BXR5 811 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 STX8Q9UNK0 236 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 CHUKO15111 745 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 CCNT1O60563 726 aaKnown RBP14.53□□□□□ -0.08
MSH6-214ENST00000616033 CAND2O75155 1236 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 ELF1P32519 619 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 MDH1P40925 334 aaKnown RBP14.53□□□□□ -0.08
MSH6-214ENST00000616033 TXKP42681 527 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 ALS2CLQ60I27 953 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 BLIDQ8IZY5 108 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 TCP11Q8WWU5 503 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 PACSIN1Q9BY11 444 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 ADAMTS1Q9UHI8 967 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 WDR17Q8IZU2 1322 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 RTL9Q8NET4 1388 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 LMO7Q8WWI1 1683 aa14.53□□□□□ -0.08
MSH6-214ENST00000616033 CACNB1Q02641 598 aaPredicted RBP14.52□□□□□ -0.08
MSH6-214ENST00000616033 CABP7Q86V35 215 aa14.52□□□□□ -0.08
MSH6-214ENST00000616033 NELFCDQ8IXH7 590 aa14.52□□□□□ -0.08
MSH6-214ENST00000616033 CCDC170Q8IYT3 715 aa14.52□□□□□ -0.08
MSH6-214ENST00000616033 GLIS3Q8NEA6 775 aa14.52□□□□□ -0.08
MSH6-214ENST00000616033 LRRC15Q8TF66 581 aa14.52□□□□□ -0.08
MSH6-214ENST00000616033 TSGA10Q9BZW7 698 aa14.52□□□□□ -0.08
MSH6-214ENST00000616033 RAD51CO43502 376 aa14.52□□□□□ -0.09
MSH6-214ENST00000616033 CLTAP09496 248 aa14.52□□□□□ -0.09
MSH6-214ENST00000616033 FNTAP49354 379 aa14.52□□□□□ -0.09
MSH6-214ENST00000616033 IFFO1Q0D2I5 559 aa14.52□□□□□ -0.09
MSH6-214ENST00000616033 NEDD9Q14511 834 aa14.52□□□□□ -0.09
MSH6-214ENST00000616033 PPP1R7Q15435 360 aa14.52□□□□□ -0.09
MSH6-214ENST00000616033 SEC23AQ15436 765 aa14.52□□□□□ -0.09
MSH6-214ENST00000616033 NPY5RQ15761 445 aa14.52□□□□□ -0.09
MSH6-214ENST00000616033 TXNRD1Q16881 649 aa14.52□□□□□ -0.09
MSH6-214ENST00000616033 TAX1BP1Q86VP1 789 aa14.52□□□□□ -0.09
MSH6-214ENST00000616033 NDST4Q9H3R1 872 aa14.52□□□□□ -0.09
MSH6-214ENST00000616033 TCP11L1Q9NUJ3 509 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms