RNA–Protein interactions for RNA: ENST00000610966.4

SVOP-205, Transcript of SV2 related protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVOP, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-205ENST00000610966 TRIM50Q86XT4 487 aa10.4□□□□□ -0.74
SVOP-205ENST00000610966 POTEDQ86YR6 584 aa10.4□□□□□ -0.74
SVOP-205ENST00000610966 WDR11Q9BZH6 1224 aa10.4□□□□□ -0.74
SVOP-205ENST00000610966 BZW2Q9Y6E2 419 aaKnown RBP10.4□□□□□ -0.74
SVOP-205ENST00000610966 GAP43P17677 238 aa10.4□□□□□ -0.74
SVOP-205ENST00000610966 PIK3CAP42336 1068 aa10.4□□□□□ -0.74
SVOP-205ENST00000610966 LIFRP42702 1097 aa10.4□□□□□ -0.74
SVOP-205ENST00000610966 KCTD2Q14681 263 aa10.4□□□□□ -0.74
SVOP-205ENST00000610966 DIXDC1Q155Q3 683 aa10.4□□□□□ -0.74
SVOP-205ENST00000610966 RSRC1Q96IZ7 334 aaKnown RBP10.4□□□□□ -0.74
SVOP-205ENST00000610966 CD2APQ9Y5K6 639 aa10.4□□□□□ -0.74
SVOP-205ENST00000610966 TSPOAP1O95153 1857 aa10.4□□□□□ -0.74
SVOP-205ENST00000610966 CNGA1P29973 690 aa10.4□□□□□ -0.74
SVOP-205ENST00000610966 NSFP46459 744 aaKnown RBP10.4□□□□□ -0.74
SVOP-205ENST00000610966 USP14P54578 494 aa10.4□□□□□ -0.74
SVOP-205ENST00000610966 PTK2Q05397 1052 aa10.4□□□□□ -0.74
SVOP-205ENST00000610966 ANKRD42Q8N9B4 389 aa10.4□□□□□ -0.74
SVOP-205ENST00000610966 MGARPQ8TDB4 240 aa10.4□□□□□ -0.74
SVOP-205ENST00000610966 ARHGEF2Q92974 986 aaKnown RBP10.4□□□□□ -0.74
SVOP-205ENST00000610966 DPH5Q9H2P9 285 aa10.4□□□□□ -0.74
SVOP-205ENST00000610966 BSDC1Q9NW68 430 aaPredicted RBP10.4□□□□□ -0.74
SVOP-205ENST00000610966 SRP68Q9UHB9 627 aaKnown RBP10.4□□□□□ -0.74
SVOP-205ENST00000610966 CDC25BP30305 580 aa10.4□□□□□ -0.75
SVOP-205ENST00000610966 SF3A3Q12874 501 aaKnown RBP eCLIP10.4□□□□□ -0.75
SVOP-205ENST00000610966 ZNF658Q5TYW1 1059 aaPredicted RBP10.4□□□□□ -0.75
SVOP-205ENST00000610966 SLC17A8Q8NDX2 589 aa10.4□□□□□ -0.75
SVOP-205ENST00000610966 PI4KBQ9UBF8 816 aa10.4□□□□□ -0.75
SVOP-205ENST00000610966 STX2P32856 288 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 PSMC2P35998 433 aaKnown RBP10.39□□□□□ -0.75
SVOP-205ENST00000610966 RASSF7Q02833 373 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 PPP2R5AQ15172 486 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 LRRC41Q15345 812 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.39□□□□□ -0.75
SVOP-205ENST00000610966 STK17AQ9UEE5 414 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 NRBP1Q9UHY1 535 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 ARAP3Q8WWN8 1544 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 LARGE1O95461 756 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 ARHGAP25P42331 645 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 STAT2P52630 851 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 GRAPQ13588 217 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 C11orf57Q6ZUT1 292 aaPredicted RBP10.39□□□□□ -0.75
SVOP-205ENST00000610966 KRT27Q7Z3Y8 459 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 GRAMD1CQ8IYS0 662 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 GRAPLQ8TC17 118 aaPredicted RBP10.39□□□□□ -0.75
SVOP-205ENST00000610966 HAUS1Q96CS2 278 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 NT5C1BQ96P26 610 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 MAN1B1Q9UKM7 699 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 PALM3A6NDB9 673 aaPredicted RBP10.39□□□□□ -0.75
SVOP-205ENST00000610966 PPFIA4O75335 1185 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 MFAP3P55082 362 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 PTCH1Q13635 1447 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 NOL3O60936 208 aaKnown RBP10.39□□□□□ -0.75
SVOP-205ENST00000610966 RNF8O76064 485 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 PHBP35232 272 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 BPIFB4P59827 614 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 FKBP3Q00688 224 aaKnown RBP10.39□□□□□ -0.75
SVOP-205ENST00000610966 EHHADHQ08426 723 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 TFDP1Q14186 410 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 ANKRD20A3Q5VUR7 823 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.39□□□□□ -0.75
SVOP-205ENST00000610966 SLC7A3Q8WY07 619 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 TSC1Q92574 1164 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 CPSF1Q10570 1443 aaKnown RBP10.39□□□□□ -0.75
SVOP-205ENST00000610966 CDC25AP30304 524 aa10.39□□□□□ -0.75
SVOP-205ENST00000610966 RNF40O75150 1001 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 RAD17O75943 681 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 MYL1P05976 194 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 LMNB1P20700 586 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 CACNB1Q02641 598 aaPredicted RBP10.38□□□□□ -0.75
SVOP-205ENST00000610966 SESTD1Q86VW0 696 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 CACNA2D3Q8IZS8 1091 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 ARHGAP24Q8N264 748 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 PALLDQ8WX93 1383 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 NACC1Q96RE7 527 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 PYCARDQ9ULZ3 195 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 MAN2A1Q16706 1144 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 SYDE2Q5VT97 1194 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 FAM186BQ8IYM0 893 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 AFG3L2Q9Y4W6 797 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 SRPRBQ9Y5M8 271 aaKnown RBP10.38□□□□□ -0.75
SVOP-205ENST00000610966 USP17L3A6NCW0 530 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 USP17L4A6NCW7 530 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 AFPP02771 609 aaKnown RBP10.38□□□□□ -0.75
SVOP-205ENST00000610966 USP17L1Q7RTZ2 530 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 TYW1Q9NV66 732 aaKnown RBP10.38□□□□□ -0.75
SVOP-205ENST00000610966 MCAMP43121 646 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 RBL2Q08999 1139 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 RESTQ13127 1097 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 SUPT20HL1Q3ZLR7 823 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 CLEC4GQ6UXB4 293 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 RETREG2Q8NC44 543 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 CFAP57Q96MR6 1250 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 HOMER3Q9NSC5 361 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 A0A087WWV3 80 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 CYP27B1O15528 508 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 LPXNO60711 386 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 HLFQ16534 295 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 DPP9Q86TI2 863 aa10.38□□□□□ -0.75
SVOP-205ENST00000610966 PNMA8AQ86V59 439 aaPredicted RBP10.38□□□□□ -0.75
SVOP-205ENST00000610966 PPP1R13BQ96KQ4 1090 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms