RNA–Protein interactions for RNA: ENST00000610292.4

TP53-218, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,639 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-218ENST00000610292 IFIH1Q9BYX4 1025 aaKnown RBP13.21□□□□□ -0.3
TP53-218ENST00000610292 ZMYND12Q9H0C1 365 aa13.21□□□□□ -0.3
TP53-218ENST00000610292 LAMB2P55268 1798 aa13.2□□□□□ -0.3
TP53-218ENST00000610292 TXKP42681 527 aa13.2□□□□□ -0.3
TP53-218ENST00000610292 SEMA3FQ13275 785 aa13.2□□□□□ -0.3
TP53-218ENST00000610292 SLC10A5Q5PT55 438 aa13.2□□□□□ -0.3
TP53-218ENST00000610292 USP17L2Q6R6M4 530 aa13.2□□□□□ -0.3
TP53-218ENST00000610292 MAPKAPK5Q8IW41 473 aa13.2□□□□□ -0.3
TP53-218ENST00000610292 ANKRD2Q9GZV1 360 aa13.2□□□□□ -0.3
TP53-218ENST00000610292 MMRN2Q9H8L6 949 aa13.2□□□□□ -0.3
TP53-218ENST00000610292 MAGEF1Q9HAY2 307 aa13.2□□□□□ -0.3
TP53-218ENST00000610292 SMARCAL1Q9NZC9 954 aa13.2□□□□□ -0.3
TP53-218ENST00000610292 SNX12Q9UMY4 172 aa13.2□□□□□ -0.3
TP53-218ENST00000610292 PCDHA13Q9Y5I0 950 aa13.2□□□□□ -0.3
TP53-218ENST00000610292 A0A1W2PQJ5 194 aa13.2□□□□□ -0.3
TP53-218ENST00000610292 LDHBP07195 334 aaKnown RBP13.2□□□□□ -0.3
TP53-218ENST00000610292 CXCR5P32302 372 aa13.2□□□□□ -0.3
TP53-218ENST00000610292 EIF4A3P38919 411 aaKnown RBP13.2□□□□□ -0.3
TP53-218ENST00000610292 ATP2B2Q01814 1243 aa13.2□□□□□ -0.3
TP53-218ENST00000610292 FIGNQ5HY92 759 aa13.2□□□□□ -0.3
TP53-218ENST00000610292 DYMQ7RTS9 669 aa13.2□□□□□ -0.3
TP53-218ENST00000610292 KRT25Q7Z3Z0 450 aa13.2□□□□□ -0.3
TP53-218ENST00000610292 SMARCC1Q92922 1105 aaPredicted RBP13.2□□□□□ -0.3
TP53-218ENST00000610292 LRRC1Q9BTT6 524 aa13.2□□□□□ -0.3
TP53-218ENST00000610292 BIN2Q9UBW5 565 aaPredicted RBP13.2□□□□□ -0.3
TP53-218ENST00000610292 DMGDHQ9UI17 866 aaKnown RBP13.2□□□□□ -0.3
TP53-218ENST00000610292 PLAGL2Q9UPG8 496 aa13.2□□□□□ -0.3
TP53-218ENST00000610292 JRKLQ9Y4A0 524 aa13.2□□□□□ -0.3
TP53-218ENST00000610292 COL22A1Q8NFW1 1626 aaPredicted RBP13.19□□□□□ -0.3
TP53-218ENST00000610292 KIAA1551Q9HCM1 1747 aa13.19□□□□□ -0.3
TP53-218ENST00000610292 USO1O60763 962 aaKnown RBP13.19□□□□□ -0.3
TP53-218ENST00000610292 TACC1O75410 805 aa13.19□□□□□ -0.3
TP53-218ENST00000610292 CDK17Q00537 523 aa13.19□□□□□ -0.3
TP53-218ENST00000610292 AMPD3Q01432 767 aa13.19□□□□□ -0.3
TP53-218ENST00000610292 VWA3BQ502W6 1294 aa13.19□□□□□ -0.3
TP53-218ENST00000610292 SPTY2D1Q68D10 685 aaPredicted RBP13.19□□□□□ -0.3
TP53-218ENST00000610292 CNNM4Q6P4Q7 775 aa13.19□□□□□ -0.3
TP53-218ENST00000610292 NEK8Q86SG6 692 aa13.19□□□□□ -0.3
TP53-218ENST00000610292 POTEDQ86YR6 584 aa13.19□□□□□ -0.3
TP53-218ENST00000610292 ANKRD13CQ8N6S4 541 aa13.19□□□□□ -0.3
TP53-218ENST00000610292 TRIM58Q8NG06 486 aa13.19□□□□□ -0.3
TP53-218ENST00000610292 TBCKQ8TEA7 893 aa13.19□□□□□ -0.3
TP53-218ENST00000610292 TSGA10Q9BZW7 698 aa13.19□□□□□ -0.3
TP53-218ENST00000610292 NDST4Q9H3R1 872 aa13.19□□□□□ -0.3
TP53-218ENST00000610292 DEF6Q9H4E7 631 aa13.19□□□□□ -0.3
TP53-218ENST00000610292 TMEM260Q9NX78 707 aa13.19□□□□□ -0.3
TP53-218ENST00000610292 EHD2Q9NZN4 543 aa13.19□□□□□ -0.3
TP53-218ENST00000610292 SRP68Q9UHB9 627 aaKnown RBP13.19□□□□□ -0.3
TP53-218ENST00000610292 MYMKA6NI61 221 aa13.19□□□□□ -0.3
TP53-218ENST00000610292 RASA1P20936 1047 aa13.19□□□□□ -0.3
TP53-218ENST00000610292 KIF11P52732 1056 aa13.19□□□□□ -0.3
TP53-218ENST00000610292 SLC7A5Q01650 507 aa13.19□□□□□ -0.3
TP53-218ENST00000610292 CENPPQ6IPU0 288 aa13.19□□□□□ -0.3
TP53-218ENST00000610292 NFRKBQ6P4R8 1299 aa13.19□□□□□ -0.3
TP53-218ENST00000610292 CALML4Q96GE6 196 aa13.19□□□□□ -0.3
TP53-218ENST00000610292 SH2D4AQ9H788 454 aa13.19□□□□□ -0.3
TP53-218ENST00000610292 SIK3Q9Y2K2 1263 aa13.19□□□□□ -0.3
TP53-218ENST00000610292 SPATA31A1Q5TZJ5 1347 aa13.18□□□□□ -0.3
TP53-218ENST00000610292 AKR1B10O60218 316 aa13.18□□□□□ -0.3
TP53-218ENST00000610292 IQCEQ6IPM2 695 aa13.18□□□□□ -0.3
TP53-218ENST00000610292 TMED8Q6PL24 325 aaPredicted RBP13.18□□□□□ -0.3
TP53-218ENST00000610292 SND1Q7KZF4 910 aaKnown RBP eCLIP13.18□□□□□ -0.3
TP53-218ENST00000610292 SV2BQ7L1I2 683 aa13.18□□□□□ -0.3
TP53-218ENST00000610292 RRAGAQ7L523 313 aa13.18□□□□□ -0.3
TP53-218ENST00000610292 NBPF5PQ86XG9 351 aaPredicted RBP13.18□□□□□ -0.3
TP53-218ENST00000610292 AMOTL1Q8IY63 956 aa13.18□□□□□ -0.3
TP53-218ENST00000610292 FNBP4Q8N3X1 1017 aaPredicted RBP13.18□□□□□ -0.3
TP53-218ENST00000610292 RRP36Q96EU6 259 aaKnown RBP13.18□□□□□ -0.3
TP53-218ENST00000610292 C6orf50Q9HD87 102 aa13.18□□□□□ -0.3
TP53-218ENST00000610292 COL14A1Q05707 1796 aaKnown RBP13.18□□□□□ -0.3
TP53-218ENST00000610292 LAMB1P07942 1786 aa13.18□□□□□ -0.3
TP53-218ENST00000610292 GOLGA6BA6NDN3 693 aa13.18□□□□□ -0.3
TP53-218ENST00000610292 LRRC53A6NM62 1247 aa13.18□□□□□ -0.3
TP53-218ENST00000610292 NCK2O43639 380 aa13.18□□□□□ -0.3
TP53-218ENST00000610292 GRB10Q13322 594 aa13.18□□□□□ -0.3
TP53-218ENST00000610292 CCDC155Q8N6L0 562 aa13.18□□□□□ -0.3
TP53-218ENST00000610292 SPATA4Q8NEY3 305 aa13.18□□□□□ -0.3
TP53-218ENST00000610292 AENQ8WTP8 325 aaKnown RBP13.18□□□□□ -0.3
TP53-218ENST00000610292 PIGSQ96S52 555 aa13.18□□□□□ -0.3
TP53-218ENST00000610292 CDCA7Q9BWT1 371 aaPredicted RBP13.18□□□□□ -0.3
TP53-218ENST00000610292 UBA5Q9GZZ9 404 aa13.18□□□□□ -0.3
TP53-218ENST00000610292 BLOC1S4Q9NUP1 217 aa13.18□□□□□ -0.3
TP53-218ENST00000610292 RREB1Q92766 1687 aa13.18□□□□□ -0.3
TP53-218ENST00000610292 HNRNPH3P31942 346 aaKnown RBP13.17□□□□□ -0.3
TP53-218ENST00000610292 SOGA3Q5TF21 947 aa13.17□□□□□ -0.3
TP53-218ENST00000610292 CCDC70Q6NSX1 233 aa13.17□□□□□ -0.3
TP53-218ENST00000610292 MMGT1Q8N4V1 131 aa13.17□□□□□ -0.3
TP53-218ENST00000610292 GPR101Q96P66 508 aaPredicted RBP13.17□□□□□ -0.3
TP53-218ENST00000610292 OSBPL9Q96SU4 736 aa13.17□□□□□ -0.3
TP53-218ENST00000610292 SETDB2Q96T68 719 aa13.17□□□□□ -0.3
TP53-218ENST00000610292 SPZ1Q9BXG8 430 aa13.17□□□□□ -0.3
TP53-218ENST00000610292 SALL4Q9UJQ4 1053 aa13.17□□□□□ -0.3
TP53-218ENST00000610292 FAM184BQ9ULE4 1060 aa13.17□□□□□ -0.3
TP53-218ENST00000610292 GNA11P29992 359 aa13.17□□□□□ -0.3
TP53-218ENST00000610292 PPP1R2P41236 205 aa13.17□□□□□ -0.3
TP53-218ENST00000610292 LRRC41Q15345 812 aa13.17□□□□□ -0.3
TP53-218ENST00000610292 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.17□□□□□ -0.3
TP53-218ENST00000610292 GLIS3Q8NEA6 775 aa13.17□□□□□ -0.3
TP53-218ENST00000610292 PNMA5Q96PV4 448 aa13.17□□□□□ -0.3
TP53-218ENST00000610292 LZTS2Q9BRK4 669 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms