RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 ZSCAN10Q96SZ4 725 aaPredicted RBP15.67■□□□□ 0.1
POLR2J3-219ENST00000608621 NKX2-4Q9H2Z4 354 aa15.67■□□□□ 0.1
POLR2J3-219ENST00000608621 ZSWIM5Q9P217 1185 aa15.67■□□□□ 0.1
POLR2J3-219ENST00000608621 TNKSO95271 1327 aa15.67■□□□□ 0.1
POLR2J3-219ENST00000608621 A6NJR5 290 aa15.66■□□□□ 0.1
POLR2J3-219ENST00000608621 HIP1O00291 1037 aa15.66■□□□□ 0.1
POLR2J3-219ENST00000608621 NT5C2P49902 561 aa15.66■□□□□ 0.1
POLR2J3-219ENST00000608621 CDC37Q16543 378 aaPredicted RBP15.66■□□□□ 0.1
POLR2J3-219ENST00000608621 FAM47CQ5HY64 1035 aa15.66■□□□□ 0.1
POLR2J3-219ENST00000608621 PPM1EQ8WY54 764 aa15.66■□□□□ 0.1
POLR2J3-219ENST00000608621 DSCC1Q9BVC3 393 aa15.66■□□□□ 0.1
POLR2J3-219ENST00000608621 VAT1LQ9HCJ6 419 aa15.66■□□□□ 0.1
POLR2J3-219ENST00000608621 YBX2Q9Y2T7 364 aaKnown RBP15.66■□□□□ 0.1
POLR2J3-219ENST00000608621 SLC4A7Q9Y6M7 1214 aa15.66■□□□□ 0.1
POLR2J3-219ENST00000608621 EYSQ5T1H1 3165 aa15.66■□□□□ 0.1
POLR2J3-219ENST00000608621 CDH23Q9H251 3354 aa15.65■□□□□ 0.1
POLR2J3-219ENST00000608621 KPNA6O60684 536 aa15.65■□□□□ 0.1
POLR2J3-219ENST00000608621 ARIH2O95376 493 aa15.65■□□□□ 0.1
POLR2J3-219ENST00000608621 RABGGTBP53611 331 aa15.65■□□□□ 0.1
POLR2J3-219ENST00000608621 TTLL4Q14679 1199 aa15.65■□□□□ 0.1
POLR2J3-219ENST00000608621 IMMTQ16891 758 aaKnown RBP15.65■□□□□ 0.1
POLR2J3-219ENST00000608621 ENAHQ8N8S7 591 aaPredicted RBP15.65■□□□□ 0.1
POLR2J3-219ENST00000608621 MAF1Q9H063 256 aa15.65■□□□□ 0.1
POLR2J3-219ENST00000608621 SLC28A3Q9HAS3 691 aa15.65■□□□□ 0.1
POLR2J3-219ENST00000608621 PRUNE2Q8WUY3 3088 aa15.65■□□□□ 0.1
POLR2J3-219ENST00000608621 ABCB11O95342 1321 aa15.65■□□□□ 0.1
POLR2J3-219ENST00000608621 RAD50Q92878 1312 aa15.65■□□□□ 0.1
POLR2J3-219ENST00000608621 ZBBXA8MT70 800 aa15.64■□□□□ 0.09
POLR2J3-219ENST00000608621 DHX16O60231 1041 aaKnown RBP15.64■□□□□ 0.09
POLR2J3-219ENST00000608621 QRICH1Q2TAL8 776 aa15.64■□□□□ 0.09
POLR2J3-219ENST00000608621 ASPRV1Q53RT3 343 aa15.64■□□□□ 0.09
POLR2J3-219ENST00000608621 CCDC62Q6P9F0 684 aa15.64■□□□□ 0.09
POLR2J3-219ENST00000608621 SEPT14Q6ZU15 432 aa15.64■□□□□ 0.09
POLR2J3-219ENST00000608621 DEFB128Q7Z7B8 93 aa15.64■□□□□ 0.09
POLR2J3-219ENST00000608621 SYTL5Q8TDW5 730 aaPredicted RBP15.64■□□□□ 0.09
POLR2J3-219ENST00000608621 SYMPKQ92797 1274 aaKnown RBP15.64■□□□□ 0.09
POLR2J3-219ENST00000608621 KRT23Q9C075 422 aa15.64■□□□□ 0.09
POLR2J3-219ENST00000608621 JMJD4Q9H9V9 463 aa15.64■□□□□ 0.09
POLR2J3-219ENST00000608621 PRDM6Q9NQX0 595 aa15.64■□□□□ 0.09
POLR2J3-219ENST00000608621 COL20A1Q9P218 1284 aa15.64■□□□□ 0.09
POLR2J3-219ENST00000608621 CTNNA3Q9UI47 895 aa15.64■□□□□ 0.09
POLR2J3-219ENST00000608621 PARP1P09874 1014 aaKnown RBP15.63■□□□□ 0.09
POLR2J3-219ENST00000608621 CHMP4BP1P59074 171 aa15.63■□□□□ 0.09
POLR2J3-219ENST00000608621 ADGRE1Q14246 886 aa15.63■□□□□ 0.09
POLR2J3-219ENST00000608621 LY6KQ17RY6 165 aa15.63■□□□□ 0.09
POLR2J3-219ENST00000608621 NFRKBQ6P4R8 1299 aa15.63■□□□□ 0.09
POLR2J3-219ENST00000608621 FBXO11Q86XK2 927 aa15.63■□□□□ 0.09
POLR2J3-219ENST00000608621 MCF2L2Q86YR7 1114 aa15.63■□□□□ 0.09
POLR2J3-219ENST00000608621 NSUN6Q8TEA1 469 aaKnown RBP15.63■□□□□ 0.09
POLR2J3-219ENST00000608621 MRPL11Q9Y3B7 192 aaKnown RBP15.63■□□□□ 0.09
POLR2J3-219ENST00000608621 SCN10AQ9Y5Y9 1956 aa15.63■□□□□ 0.09
POLR2J3-219ENST00000608621 GH1P01241 217 aa15.62■□□□□ 0.09
POLR2J3-219ENST00000608621 PFKMP08237 780 aa15.62■□□□□ 0.09
POLR2J3-219ENST00000608621 MYOGP15173 224 aa15.62■□□□□ 0.09
POLR2J3-219ENST00000608621 IGFBP4P22692 258 aa15.62■□□□□ 0.09
POLR2J3-219ENST00000608621 PTPN11Q06124 597 aaPredicted RBP15.62■□□□□ 0.09
POLR2J3-219ENST00000608621 STXBP2Q15833 593 aa15.62■□□□□ 0.09
POLR2J3-219ENST00000608621 CCDC85BQ15834 202 aaPredicted RBP15.62■□□□□ 0.09
POLR2J3-219ENST00000608621 CHST3Q7LGC8 479 aa15.62■□□□□ 0.09
POLR2J3-219ENST00000608621 STAG2Q8N3U4 1231 aa15.62■□□□□ 0.09
POLR2J3-219ENST00000608621 RETREG2Q8NC44 543 aa15.62■□□□□ 0.09
POLR2J3-219ENST00000608621 AFG1LQ8WV93 481 aa15.62■□□□□ 0.09
POLR2J3-219ENST00000608621 IWS1Q96ST2 819 aa15.62■□□□□ 0.09
POLR2J3-219ENST00000608621 RMDN3Q96TC7 470 aa15.62■□□□□ 0.09
POLR2J3-219ENST00000608621 CNNM2Q9H8M5 875 aa15.62■□□□□ 0.09
POLR2J3-219ENST00000608621 GBF1Q92538 1859 aa15.62■□□□□ 0.09
POLR2J3-219ENST00000608621 SCN5AQ14524 2016 aa15.61■□□□□ 0.09
POLR2J3-219ENST00000608621 CHD9Q3L8U1 2897 aa15.61■□□□□ 0.09
POLR2J3-219ENST00000608621 CFBP00751 764 aa15.61■□□□□ 0.09
POLR2J3-219ENST00000608621 IQCF3P0C7M6 154 aa15.61■□□□□ 0.09
POLR2J3-219ENST00000608621 ATP2A2P16615 1042 aaKnown RBP15.61■□□□□ 0.09
POLR2J3-219ENST00000608621 TJAP1Q5JTD0 557 aa15.61■□□□□ 0.09
POLR2J3-219ENST00000608621 IFIT1BQ5T764 474 aaKnown RBP15.61■□□□□ 0.09
POLR2J3-219ENST00000608621 ARHGEF16Q5VV41 709 aa15.61■□□□□ 0.09
POLR2J3-219ENST00000608621 UBAC1Q9BSL1 405 aa15.61■□□□□ 0.09
POLR2J3-219ENST00000608621 IL25Q9H293 177 aa15.61■□□□□ 0.09
POLR2J3-219ENST00000608621 NOD1Q9Y239 953 aa15.61■□□□□ 0.09
POLR2J3-219ENST00000608621 PCDHA11Q9Y5I1 949 aa15.61■□□□□ 0.09
POLR2J3-219ENST00000608621 LAMA4Q16363 1823 aa15.61■□□□□ 0.09
POLR2J3-219ENST00000608621 PITPNM1O00562 1244 aa15.6■□□□□ 0.09
POLR2J3-219ENST00000608621 MMP3P08254 477 aa15.6■□□□□ 0.09
POLR2J3-219ENST00000608621 ACTN1P12814 892 aa15.6■□□□□ 0.09
POLR2J3-219ENST00000608621 RFC2P35250 354 aa15.6■□□□□ 0.09
POLR2J3-219ENST00000608621 ARHGAP1Q07960 439 aa15.6■□□□□ 0.09
POLR2J3-219ENST00000608621 BFSP2Q13515 415 aa15.6■□□□□ 0.09
POLR2J3-219ENST00000608621 PPP2R2DQ66LE6 453 aa15.6■□□□□ 0.09
POLR2J3-219ENST00000608621 CYB5R4Q7L1T6 521 aa15.6■□□□□ 0.09
POLR2J3-219ENST00000608621 FTOQ9C0B1 505 aaKnown RBP eCLIP15.6■□□□□ 0.09
POLR2J3-219ENST00000608621 DDX41Q9UJV9 622 aaKnown RBP15.6■□□□□ 0.09
POLR2J3-219ENST00000608621 MYH6P13533 1939 aa15.6■□□□□ 0.09
POLR2J3-219ENST00000608621 KLRF2D3W0D1 207 aa15.59■□□□□ 0.09
POLR2J3-219ENST00000608621 EIF3JO75822 258 aaKnown RBP15.59■□□□□ 0.09
POLR2J3-219ENST00000608621 NR3C2P08235 984 aa15.59■□□□□ 0.09
POLR2J3-219ENST00000608621 EIF2AK2P19525 551 aaKnown RBP15.59■□□□□ 0.09
POLR2J3-219ENST00000608621 CASTP20810 708 aaKnown RBP15.59■□□□□ 0.09
POLR2J3-219ENST00000608621 SEC23AQ15436 765 aa15.59■□□□□ 0.09
POLR2J3-219ENST00000608621 PTGISQ16647 500 aa15.59■□□□□ 0.09
POLR2J3-219ENST00000608621 TMEM67Q5HYA8 995 aa15.59■□□□□ 0.09
POLR2J3-219ENST00000608621 KAT2BQ92831 832 aa15.59■□□□□ 0.09
POLR2J3-219ENST00000608621 AMNQ9BXJ7 453 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms