RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 TFCP2Q12800 502 aa13.12□□□□□ -0.31
CTCFL-217ENST00000608425 TRIM28Q13263 835 aaKnown RBP13.12□□□□□ -0.31
CTCFL-217ENST00000608425 EMBQ6PCB8 327 aa13.12□□□□□ -0.31
CTCFL-217ENST00000608425 SMYD4Q8IYR2 804 aaPredicted RBP13.12□□□□□ -0.31
CTCFL-217ENST00000608425 MLKLQ8NB16 471 aa13.12□□□□□ -0.31
CTCFL-217ENST00000608425 MDM1Q8TC05 714 aa13.12□□□□□ -0.31
CTCFL-217ENST00000608425 MAIP1Q8WWC4 291 aa13.12□□□□□ -0.31
CTCFL-217ENST00000608425 LLPHQ9BRT6 129 aaKnown RBP13.12□□□□□ -0.31
CTCFL-217ENST00000608425 ISCA1Q9BUE6 129 aa13.12□□□□□ -0.31
CTCFL-217ENST00000608425 SLC12A6Q9UHW9 1150 aa13.12□□□□□ -0.31
CTCFL-217ENST00000608425 BCL9O00512 1426 aa13.12□□□□□ -0.31
CTCFL-217ENST00000608425 PARP1P09874 1014 aaKnown RBP13.12□□□□□ -0.31
CTCFL-217ENST00000608425 KIF5BP33176 963 aa13.12□□□□□ -0.31
CTCFL-217ENST00000608425 KRT9P35527 623 aa13.12□□□□□ -0.31
CTCFL-217ENST00000608425 ZNF268Q14587 947 aaPredicted RBP13.12□□□□□ -0.31
CTCFL-217ENST00000608425 RASA3Q14644 834 aa13.12□□□□□ -0.31
CTCFL-217ENST00000608425 EMC10Q5UCC4 262 aa13.12□□□□□ -0.31
CTCFL-217ENST00000608425 GKAP1Q5VSY0 366 aaPredicted RBP13.12□□□□□ -0.31
CTCFL-217ENST00000608425 UBN2Q6ZU65 1347 aa13.12□□□□□ -0.31
CTCFL-217ENST00000608425 NRAPQ86VF7 1730 aa13.12□□□□□ -0.31
CTCFL-217ENST00000608425 SPATA4Q8NEY3 305 aa13.12□□□□□ -0.31
CTCFL-217ENST00000608425 SALL1Q9NSC2 1324 aa13.12□□□□□ -0.31
CTCFL-217ENST00000608425 STIM2Q9P246 746 aa13.12□□□□□ -0.31
CTCFL-217ENST00000608425 ABCF2Q9UG63 623 aa13.12□□□□□ -0.31
CTCFL-217ENST00000608425 CASP1P29466 404 aa13.11□□□□□ -0.31
CTCFL-217ENST00000608425 GLE1Q53GS7 698 aaKnown RBP13.11□□□□□ -0.31
CTCFL-217ENST00000608425 TMEM154Q6P9G4 183 aa13.11□□□□□ -0.31
CTCFL-217ENST00000608425 CYP26C1Q6V0L0 522 aa13.11□□□□□ -0.31
CTCFL-217ENST00000608425 TMTC2Q8N394 836 aa13.11□□□□□ -0.31
CTCFL-217ENST00000608425 LRRC4CQ9HCJ2 640 aa13.11□□□□□ -0.31
CTCFL-217ENST00000608425 DLGAP2Q9P1A6 1054 aa13.11□□□□□ -0.31
CTCFL-217ENST00000608425 PLAAQ9Y263 795 aa13.11□□□□□ -0.31
CTCFL-217ENST00000608425 ZPR1O75312 459 aa13.11□□□□□ -0.31
CTCFL-217ENST00000608425 MBD4O95243 580 aa13.11□□□□□ -0.31
CTCFL-217ENST00000608425 DRD4P21917 467 aa13.11□□□□□ -0.31
CTCFL-217ENST00000608425 SLMAPQ14BN4 828 aa13.11□□□□□ -0.31
CTCFL-217ENST00000608425 CCDC57Q2TAC2 916 aa13.11□□□□□ -0.31
CTCFL-217ENST00000608425 PABPC1LQ4VXU2 614 aaKnown RBP13.11□□□□□ -0.31
CTCFL-217ENST00000608425 CNGA4Q8IV77 575 aa13.11□□□□□ -0.31
CTCFL-217ENST00000608425 CAVIN3Q969G5 261 aa13.11□□□□□ -0.31
CTCFL-217ENST00000608425 RPGRIP1Q96KN7 1286 aa13.11□□□□□ -0.31
CTCFL-217ENST00000608425 AIFM3Q96NN9 605 aa13.11□□□□□ -0.31
CTCFL-217ENST00000608425 VPS16Q9H269 839 aa13.11□□□□□ -0.31
CTCFL-217ENST00000608425 NKX1-2Q9UD57 310 aaPredicted RBP13.11□□□□□ -0.31
CTCFL-217ENST00000608425 ZNF609O15014 1411 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 DOT1LQ8TEK3 1739 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 CIAO1O76071 339 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 KRT16P08779 473 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 GHRP10912 638 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 ZNF24P17028 368 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 IL15P40933 162 aaPredicted RBP13.1□□□□□ -0.31
CTCFL-217ENST00000608425 BPIFB4P59827 614 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 GRIN1Q05586 938 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 CCDC15Q0P6D6 951 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 CCDC70Q6NSX1 233 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 MMGT1Q8N4V1 131 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 CCHCR1Q8TD31 782 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 ZBTB3Q9H5J0 574 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 SLC12A4Q9UP95 1085 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 TRIM33Q9UPN9 1127 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 PHF24Q9UPV7 400 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 MYH3P11055 1940 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 C5orf60A6NFR6 353 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 NPTXRO95502 500 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 ALADP13716 330 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 CD44P16070 742 aaKnown RBP13.1□□□□□ -0.31
CTCFL-217ENST00000608425 PCK1P35558 622 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 MDM2Q00987 491 aaPredicted RBP13.1□□□□□ -0.31
CTCFL-217ENST00000608425 Q4G0T1 1027 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 TSHZ1Q6ZSZ6 1077 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 PIGBQ92521 554 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 NDNQ99608 321 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 HAUS7Q99871 368 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 ABCF3Q9NUQ8 709 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 KCNH3Q9ULD8 1083 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 CEP131Q9UPN4 1083 aa13.1□□□□□ -0.31
CTCFL-217ENST00000608425 CICQ96RK0 1608 aaPredicted RBP13.1□□□□□ -0.31
CTCFL-217ENST00000608425 IGF2BP3O00425 579 aaKnown RBP eCLIP13.09□□□□□ -0.31
CTCFL-217ENST00000608425 LUC7L3O95232 432 aaKnown RBP13.09□□□□□ -0.31
CTCFL-217ENST00000608425 STARD3NLO95772 234 aa13.09□□□□□ -0.31
CTCFL-217ENST00000608425 ATP2A2P16615 1042 aaKnown RBP13.09□□□□□ -0.31
CTCFL-217ENST00000608425 SP100P23497 879 aaPredicted RBP13.09□□□□□ -0.31
CTCFL-217ENST00000608425 PDIA3P30101 505 aaKnown RBP13.09□□□□□ -0.31
CTCFL-217ENST00000608425 PAK2Q13177 524 aa13.09□□□□□ -0.31
CTCFL-217ENST00000608425 TCIRG1Q13488 830 aa13.09□□□□□ -0.31
CTCFL-217ENST00000608425 SLC39A14Q15043 492 aa13.09□□□□□ -0.31
CTCFL-217ENST00000608425 CDC37Q16543 378 aaPredicted RBP13.09□□□□□ -0.31
CTCFL-217ENST00000608425 NFRKBQ6P4R8 1299 aa13.09□□□□□ -0.31
CTCFL-217ENST00000608425 ATG9AQ7Z3C6 839 aa13.09□□□□□ -0.31
CTCFL-217ENST00000608425 ADAM22Q9P0K1 906 aa13.09□□□□□ -0.31
CTCFL-217ENST00000608425 HMG20BQ9P0W2 317 aa13.09□□□□□ -0.31
CTCFL-217ENST00000608425 PALLDQ8WX93 1383 aa13.09□□□□□ -0.31
CTCFL-217ENST00000608425 NQO1P15559 274 aaKnown RBP13.09□□□□□ -0.31
CTCFL-217ENST00000608425 CCND1P24385 295 aa13.09□□□□□ -0.31
CTCFL-217ENST00000608425 CYP27A1Q02318 531 aa13.09□□□□□ -0.31
CTCFL-217ENST00000608425 ODF2Q5BJF6 829 aa13.09□□□□□ -0.31
CTCFL-217ENST00000608425 GPIHBP1Q8IV16 184 aa13.09□□□□□ -0.31
CTCFL-217ENST00000608425 UCMAQ8WVF2 138 aa13.09□□□□□ -0.31
CTCFL-217ENST00000608425 TSPAN18Q96SJ8 248 aa13.09□□□□□ -0.31
CTCFL-217ENST00000608425 MTFR1LQ9H019 292 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms