RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 MTCH2Q9Y6C9 303 aa15.94■□□□□ 0.14
CTSA-218ENST00000607814 DDX49Q9Y6V7 483 aaKnown RBP15.94■□□□□ 0.14
CTSA-218ENST00000607814 U3KPZ7 1027 aaPredicted RBP15.94■□□□□ 0.14
CTSA-218ENST00000607814 ASTN1O14525 1302 aa15.94■□□□□ 0.14
CTSA-218ENST00000607814 GRIN2DO15399 1336 aa15.94■□□□□ 0.14
CTSA-218ENST00000607814 E7EWF7 191 aa15.93■□□□□ 0.14
CTSA-218ENST00000607814 B4GALT4O60513 344 aa15.93■□□□□ 0.14
CTSA-218ENST00000607814 KCNQ1P51787 676 aa15.93■□□□□ 0.14
CTSA-218ENST00000607814 CNTN2Q02246 1040 aa15.93■□□□□ 0.14
CTSA-218ENST00000607814 SKIV2LQ15477 1246 aaKnown RBP15.93■□□□□ 0.14
CTSA-218ENST00000607814 MUM1L1Q5H9M0 696 aa15.93■□□□□ 0.14
CTSA-218ENST00000607814 SYDE2Q5VT97 1194 aa15.93■□□□□ 0.14
CTSA-218ENST00000607814 DGKHQ86XP1 1220 aa15.93■□□□□ 0.14
CTSA-218ENST00000607814 PNMA1Q8ND90 353 aa15.93■□□□□ 0.14
CTSA-218ENST00000607814 PURBQ96QR8 312 aaKnown RBP15.93■□□□□ 0.14
CTSA-218ENST00000607814 KRT23Q9C075 422 aa15.93■□□□□ 0.14
CTSA-218ENST00000607814 LSG1Q9H089 658 aaKnown RBP15.93■□□□□ 0.14
CTSA-218ENST00000607814 ACAD9Q9H845 621 aa15.93■□□□□ 0.14
CTSA-218ENST00000607814 KAT14Q9H8E8 782 aa15.93■□□□□ 0.14
CTSA-218ENST00000607814 LAMA4Q16363 1823 aa15.93■□□□□ 0.14
CTSA-218ENST00000607814 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.92■□□□□ 0.14
CTSA-218ENST00000607814 ZBBXA8MT70 800 aa15.92■□□□□ 0.14
CTSA-218ENST00000607814 SUPT20HL2P0C7V6 817 aa15.92■□□□□ 0.14
CTSA-218ENST00000607814 MYOGP15173 224 aa15.92■□□□□ 0.14
CTSA-218ENST00000607814 ZNF543Q08ER8 600 aa15.92■□□□□ 0.14
CTSA-218ENST00000607814 BMP2KLQ5H9B9 411 aa15.92■□□□□ 0.14
CTSA-218ENST00000607814 TMEM31Q5JXX7 168 aa15.92■□□□□ 0.14
CTSA-218ENST00000607814 IQSEC1Q6DN90 963 aa15.92■□□□□ 0.14
CTSA-218ENST00000607814 KIAA1211Q6ZU35 1233 aa15.92■□□□□ 0.14
CTSA-218ENST00000607814 PHOSPHO2Q8TCD6 241 aa15.92■□□□□ 0.14
CTSA-218ENST00000607814 TRERF1Q96PN7 1200 aa15.92■□□□□ 0.14
CTSA-218ENST00000607814 UBAC1Q9BSL1 405 aa15.92■□□□□ 0.14
CTSA-218ENST00000607814 TRPV6Q9H1D0 765 aa15.92■□□□□ 0.14
CTSA-218ENST00000607814 ANO2Q9NQ90 1003 aa15.92■□□□□ 0.14
CTSA-218ENST00000607814 RNF146Q9NTX7 359 aa15.92■□□□□ 0.14
CTSA-218ENST00000607814 GPR37L1O60883 481 aa15.91■□□□□ 0.14
CTSA-218ENST00000607814 CA3P07451 260 aa15.91■□□□□ 0.14
CTSA-218ENST00000607814 ACTN1P12814 892 aa15.91■□□□□ 0.14
CTSA-218ENST00000607814 TKFCQ3LXA3 575 aa15.91■□□□□ 0.14
CTSA-218ENST00000607814 VWCEQ96DN2 955 aa15.91■□□□□ 0.14
CTSA-218ENST00000607814 SLC9A7Q96T83 725 aa15.91■□□□□ 0.14
CTSA-218ENST00000607814 ALDH8A1Q9H2A2 487 aaPredicted RBP15.91■□□□□ 0.14
CTSA-218ENST00000607814 CNNM2Q9H8M5 875 aa15.91■□□□□ 0.14
CTSA-218ENST00000607814 VAT1LQ9HCJ6 419 aa15.91■□□□□ 0.14
CTSA-218ENST00000607814 GPHNQ9NQX3 736 aaPredicted RBP15.91■□□□□ 0.14
CTSA-218ENST00000607814 CCPG1Q9ULG6 757 aa15.91■□□□□ 0.14
CTSA-218ENST00000607814 DYNC1LI2O43237 492 aaPredicted RBP15.9■□□□□ 0.14
CTSA-218ENST00000607814 TLL1O43897 1013 aa15.9■□□□□ 0.14
CTSA-218ENST00000607814 PLA2G6O60733 806 aa15.9■□□□□ 0.14
CTSA-218ENST00000607814 SNHG28P0DPA3 235 aa15.9■□□□□ 0.14
CTSA-218ENST00000607814 SMPD1P17405 629 aa15.9■□□□□ 0.14
CTSA-218ENST00000607814 RFC2P35250 354 aa15.9■□□□□ 0.14
CTSA-218ENST00000607814 TRDNQ13061 729 aa15.9■□□□□ 0.14
CTSA-218ENST00000607814 SEC23AQ15436 765 aa15.9■□□□□ 0.14
CTSA-218ENST00000607814 IFIT1BQ5T764 474 aaKnown RBP15.9■□□□□ 0.14
CTSA-218ENST00000607814 BTNL9Q6UXG8 535 aa15.9■□□□□ 0.14
CTSA-218ENST00000607814 STAG2Q8N3U4 1231 aa15.9■□□□□ 0.14
CTSA-218ENST00000607814 ANKS1AQ92625 1134 aa15.9■□□□□ 0.14
CTSA-218ENST00000607814 HLA-CQ95604 372 aa15.9■□□□□ 0.14
CTSA-218ENST00000607814 RANBP17Q9H2T7 1088 aaKnown RBP15.9■□□□□ 0.14
CTSA-218ENST00000607814 EPHX3Q9H6B9 360 aa15.9■□□□□ 0.14
CTSA-218ENST00000607814 A1CFQ9NQ94 594 aaKnown RBP15.9■□□□□ 0.14
CTSA-218ENST00000607814 BRWD1Q9NSI6 2320 aa15.9■□□□□ 0.14
CTSA-218ENST00000607814 SOWAHBA6NEL2 793 aa15.89■□□□□ 0.13
CTSA-218ENST00000607814 IFIT3O14879 490 aaKnown RBP15.89■□□□□ 0.13
CTSA-218ENST00000607814 ANTXR2P58335 489 aa15.89■□□□□ 0.13
CTSA-218ENST00000607814 TTLL4Q14679 1199 aa15.89■□□□□ 0.13
CTSA-218ENST00000607814 NSMFQ6X4W1 530 aa15.89■□□□□ 0.13
CTSA-218ENST00000607814 RALYLQ86SE5 291 aaKnown RBP15.89■□□□□ 0.13
CTSA-218ENST00000607814 SCLYQ96I15 445 aa15.89■□□□□ 0.13
CTSA-218ENST00000607814 VTA1Q9NP79 307 aa15.89■□□□□ 0.13
CTSA-218ENST00000607814 KIF28PB7ZC32 967 aa15.88■□□□□ 0.13
CTSA-218ENST00000607814 NFIBO00712 420 aa15.88■□□□□ 0.13
CTSA-218ENST00000607814 SLC27A2O14975 620 aa15.88■□□□□ 0.13
CTSA-218ENST00000607814 ICAM1P05362 532 aa15.88■□□□□ 0.13
CTSA-218ENST00000607814 USH1GQ495M9 461 aa15.88■□□□□ 0.13
CTSA-218ENST00000607814 CCDC178Q5BJE1 867 aa15.88■□□□□ 0.13
CTSA-218ENST00000607814 CREB3L3Q68CJ9 461 aa15.88■□□□□ 0.13
CTSA-218ENST00000607814 TAPT1Q6NXT6 567 aa15.88■□□□□ 0.13
CTSA-218ENST00000607814 NCOA7Q8NI08 942 aa15.88■□□□□ 0.13
CTSA-218ENST00000607814 POLR3EQ9NVU0 708 aa15.88■□□□□ 0.13
CTSA-218ENST00000607814 LRRC37A2A6NM11 1700 aa15.88■□□□□ 0.13
CTSA-218ENST00000607814 LOC102724159A0A0B4J2E5 919 aa15.87■□□□□ 0.13
CTSA-218ENST00000607814 PITPNM1O00562 1244 aa15.87■□□□□ 0.13
CTSA-218ENST00000607814 DHX16O60231 1041 aaKnown RBP15.87■□□□□ 0.13
CTSA-218ENST00000607814 PTGS1P23219 599 aa15.87■□□□□ 0.13
CTSA-218ENST00000607814 PSMC6P62333 389 aa15.87■□□□□ 0.13
CTSA-218ENST00000607814 PWP2Q15269 919 aaKnown RBP15.87■□□□□ 0.13
CTSA-218ENST00000607814 ADGRF4Q8IZF3 695 aa15.87■□□□□ 0.13
CTSA-218ENST00000607814 MORC4Q8TE76 937 aa15.87■□□□□ 0.13
CTSA-218ENST00000607814 LRRC2Q9BYS8 371 aa15.87■□□□□ 0.13
CTSA-218ENST00000607814 CDC45O75419 566 aa15.86■□□□□ 0.13
CTSA-218ENST00000607814 PARP1P09874 1014 aaKnown RBP15.86■□□□□ 0.13
CTSA-218ENST00000607814 CPT1AP50416 773 aa15.86■□□□□ 0.13
CTSA-218ENST00000607814 TAP1Q03518 808 aa15.86■□□□□ 0.13
CTSA-218ENST00000607814 BAATQ14032 418 aaPredicted RBP15.86■□□□□ 0.13
CTSA-218ENST00000607814 DUSP28Q4G0W2 176 aa15.86■□□□□ 0.13
CTSA-218ENST00000607814 GPATCH4Q5T3I0 446 aaKnown RBP15.86■□□□□ 0.13
CTSA-218ENST00000607814 EEPD1Q7L9B9 569 aa15.86■□□□□ 0.13
CTSA-218ENST00000607814 RAB11FIP4Q86YS3 637 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms