RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 DNERQ8NFT8 737 aa17.41■□□□□ 0.38
CTSA-216ENST00000607212 TSPYL2Q9H2G4 693 aaPredicted RBP17.41■□□□□ 0.38
CTSA-216ENST00000607212 CPVLQ9H3G5 476 aa17.41■□□□□ 0.38
CTSA-216ENST00000607212 NEDD4P46934 1319 aa17.41■□□□□ 0.38
CTSA-216ENST00000607212 WDR19Q8NEZ3 1342 aa17.41■□□□□ 0.38
CTSA-216ENST00000607212 RBM47A0AV96 593 aaKnown RBP17.4■□□□□ 0.38
CTSA-216ENST00000607212 KPNA6O60684 536 aa17.4■□□□□ 0.38
CTSA-216ENST00000607212 PFKMP08237 780 aa17.4■□□□□ 0.38
CTSA-216ENST00000607212 MYOGP15173 224 aa17.4■□□□□ 0.38
CTSA-216ENST00000607212 SKIV2LQ15477 1246 aaKnown RBP17.4■□□□□ 0.38
CTSA-216ENST00000607212 CDC37Q16543 378 aaPredicted RBP17.4■□□□□ 0.38
CTSA-216ENST00000607212 CCDC178Q5BJE1 867 aa17.4■□□□□ 0.38
CTSA-216ENST00000607212 SEPT14Q6ZU15 432 aa17.4■□□□□ 0.38
CTSA-216ENST00000607212 RWDD1Q9H446 243 aaPredicted RBP17.4■□□□□ 0.38
CTSA-216ENST00000607212 KDM4AO75164 1064 aa17.39■□□□□ 0.37
CTSA-216ENST00000607212 SDSP20132 328 aa17.39■□□□□ 0.37
CTSA-216ENST00000607212 ADGRE1Q14246 886 aa17.39■□□□□ 0.37
CTSA-216ENST00000607212 TMEM67Q5HYA8 995 aa17.39■□□□□ 0.37
CTSA-216ENST00000607212 CWC27Q6UX04 472 aaKnown RBP17.39■□□□□ 0.37
CTSA-216ENST00000607212 CHST3Q7LGC8 479 aa17.39■□□□□ 0.37
CTSA-216ENST00000607212 PNMA1Q8ND90 353 aa17.39■□□□□ 0.37
CTSA-216ENST00000607212 VAT1LQ9HCJ6 419 aa17.39■□□□□ 0.37
CTSA-216ENST00000607212 PCDHA11Q9Y5I1 949 aa17.39■□□□□ 0.37
CTSA-216ENST00000607212 TNFRSF10AO00220 468 aa17.38■□□□□ 0.37
CTSA-216ENST00000607212 BFSP2Q13515 415 aa17.38■□□□□ 0.37
CTSA-216ENST00000607212 TICAM2Q86XR7 235 aa17.38■□□□□ 0.37
CTSA-216ENST00000607212 ATXN2LQ8WWM7 1075 aaKnown RBP17.38■□□□□ 0.37
CTSA-216ENST00000607212 CERS4Q9HA82 394 aa17.38■□□□□ 0.37
CTSA-216ENST00000607212 ABCB11O95342 1321 aa17.38■□□□□ 0.37
CTSA-216ENST00000607212 LAMA4Q16363 1823 aa17.37■□□□□ 0.37
CTSA-216ENST00000607212 SCN10AQ9Y5Y9 1956 aa17.37■□□□□ 0.37
CTSA-216ENST00000607212 B4E1Z4 1266 aa17.37■□□□□ 0.37
CTSA-216ENST00000607212 SNHG28P0DPA3 235 aa17.37■□□□□ 0.37
CTSA-216ENST00000607212 RFC2P35250 354 aa17.37■□□□□ 0.37
CTSA-216ENST00000607212 MRPS5P82675 430 aaKnown RBP17.37■□□□□ 0.37
CTSA-216ENST00000607212 NFRKBQ6P4R8 1299 aa17.37■□□□□ 0.37
CTSA-216ENST00000607212 DGKHQ86XP1 1220 aa17.37■□□□□ 0.37
CTSA-216ENST00000607212 MCF2L2Q86YR7 1114 aa17.37■□□□□ 0.37
CTSA-216ENST00000607212 CCDC155Q8N6L0 562 aa17.37■□□□□ 0.37
CTSA-216ENST00000607212 YTHDC1Q96MU7 727 aaKnown RBP17.37■□□□□ 0.37
CTSA-216ENST00000607212 TRIP12Q14669 1992 aaPredicted RBP17.37■□□□□ 0.37
CTSA-216ENST00000607212 TANC1Q9C0D5 1861 aa17.36■□□□□ 0.37
CTSA-216ENST00000607212 KIF28PB7ZC32 967 aa17.36■□□□□ 0.37
CTSA-216ENST00000607212 GTPBP6O43824 516 aaPredicted RBP17.36■□□□□ 0.37
CTSA-216ENST00000607212 GH1P01241 217 aa17.36■□□□□ 0.37
CTSA-216ENST00000607212 PARP1P09874 1014 aaKnown RBP17.36■□□□□ 0.37
CTSA-216ENST00000607212 KCNJ6P48051 423 aa17.36■□□□□ 0.37
CTSA-216ENST00000607212 PTPN11Q06124 597 aaPredicted RBP17.36■□□□□ 0.37
CTSA-216ENST00000607212 PTGISQ16647 500 aa17.36■□□□□ 0.37
CTSA-216ENST00000607212 IMMTQ16891 758 aaKnown RBP17.36■□□□□ 0.37
CTSA-216ENST00000607212 ARHGEF16Q5VV41 709 aa17.36■□□□□ 0.37
CTSA-216ENST00000607212 ADGRF4Q8IZF3 695 aa17.36■□□□□ 0.37
CTSA-216ENST00000607212 NSUN6Q8TEA1 469 aaKnown RBP17.36■□□□□ 0.37
CTSA-216ENST00000607212 AFG1LQ8WV93 481 aa17.36■□□□□ 0.37
CTSA-216ENST00000607212 ASB2Q96Q27 587 aa17.36■□□□□ 0.37
CTSA-216ENST00000607212 TAAR1Q96RJ0 339 aa17.36■□□□□ 0.37
CTSA-216ENST00000607212 ZSCAN10Q96SZ4 725 aaPredicted RBP17.36■□□□□ 0.37
CTSA-216ENST00000607212 UBAC1Q9BSL1 405 aa17.36■□□□□ 0.37
CTSA-216ENST00000607212 MRPL11Q9Y3B7 192 aaKnown RBP17.36■□□□□ 0.37
CTSA-216ENST00000607212 A6NJR5 290 aa17.35■□□□□ 0.37
CTSA-216ENST00000607212 HIP1O00291 1037 aa17.35■□□□□ 0.37
CTSA-216ENST00000607212 ARIH2O95376 493 aa17.35■□□□□ 0.37
CTSA-216ENST00000607212 CA3P07451 260 aa17.35■□□□□ 0.37
CTSA-216ENST00000607212 IQCF3P0C7M6 154 aa17.35■□□□□ 0.37
CTSA-216ENST00000607212 EDNRBP24530 442 aa17.35■□□□□ 0.37
CTSA-216ENST00000607212 LY6KQ17RY6 165 aa17.35■□□□□ 0.37
CTSA-216ENST00000607212 ASPRV1Q53RT3 343 aa17.35■□□□□ 0.37
CTSA-216ENST00000607212 CHD1LQ86WJ1 897 aa17.35■□□□□ 0.37
CTSA-216ENST00000607212 FBXO11Q86XK2 927 aa17.35■□□□□ 0.37
CTSA-216ENST00000607212 ADAMTS19Q8TE59 1207 aa17.35■□□□□ 0.37
CTSA-216ENST00000607212 TBC1D5Q92609 795 aa17.35■□□□□ 0.37
CTSA-216ENST00000607212 SLC9A7Q96T83 725 aa17.35■□□□□ 0.37
CTSA-216ENST00000607212 RMDN3Q96TC7 470 aa17.35■□□□□ 0.37
CTSA-216ENST00000607212 EYSQ5T1H1 3165 aa17.35■□□□□ 0.37
CTSA-216ENST00000607212 KIAA1217Q5T5P2 1943 aa17.35■□□□□ 0.37
CTSA-216ENST00000607212 MYH7BA7E2Y1 1941 aa17.34■□□□□ 0.37
CTSA-216ENST00000607212 PITPNM1O00562 1244 aa17.34■□□□□ 0.37
CTSA-216ENST00000607212 CFBP00751 764 aa17.34■□□□□ 0.37
CTSA-216ENST00000607212 MMP3P08254 477 aa17.34■□□□□ 0.37
CTSA-216ENST00000607212 EIF2AK2P19525 551 aaKnown RBP17.34■□□□□ 0.37
CTSA-216ENST00000607212 CASTP20810 708 aaKnown RBP17.34■□□□□ 0.37
CTSA-216ENST00000607212 STXBP2Q15833 593 aa17.34■□□□□ 0.37
CTSA-216ENST00000607212 QRICH1Q2TAL8 776 aa17.34■□□□□ 0.37
CTSA-216ENST00000607212 RGS22Q8NE09 1264 aa17.34■□□□□ 0.37
CTSA-216ENST00000607212 SYTL5Q8TDW5 730 aaPredicted RBP17.34■□□□□ 0.37
CTSA-216ENST00000607212 ALG1Q9BT22 464 aa17.34■□□□□ 0.37
CTSA-216ENST00000607212 KRT23Q9C075 422 aa17.34■□□□□ 0.37
CTSA-216ENST00000607212 CTNNA3Q9UI47 895 aa17.34■□□□□ 0.37
CTSA-216ENST00000607212 CDH23Q9H251 3354 aa17.34■□□□□ 0.37
CTSA-216ENST00000607212 TCF20Q9UGU0 1960 aaKnown RBP17.33■□□□□ 0.37
CTSA-216ENST00000607212 RFXAPO00287 272 aa17.33■□□□□ 0.36
CTSA-216ENST00000607212 NT5C2P49902 561 aa17.33■□□□□ 0.36
CTSA-216ENST00000607212 AAMPQ13685 434 aa17.33■□□□□ 0.36
CTSA-216ENST00000607212 IFIT1BQ5T764 474 aaKnown RBP17.33■□□□□ 0.36
CTSA-216ENST00000607212 PLEKHM2Q8IWE5 1019 aa17.33■□□□□ 0.36
CTSA-216ENST00000607212 C7orf31Q8N865 590 aa17.33■□□□□ 0.36
CTSA-216ENST00000607212 ARNTL2Q8WYA1 636 aa17.33■□□□□ 0.36
CTSA-216ENST00000607212 UHRF1Q96T88 793 aaPredicted RBP17.33■□□□□ 0.36
CTSA-216ENST00000607212 ZBED2Q9BTP6 218 aa17.33■□□□□ 0.36
CTSA-216ENST00000607212 MRVI1Q9Y6F6 885 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms