RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 FGD4Q96M96 766 aa8.8□□□□□ -1
MSH6-211ENST00000606499 TAAR1Q96RJ0 339 aa8.8□□□□□ -1
MSH6-211ENST00000606499 PCDHA6Q9UN73 950 aa8.8□□□□□ -1
MSH6-211ENST00000606499 GABRQQ9UN88 632 aa8.8□□□□□ -1
MSH6-211ENST00000606499 MTMR6Q9Y217 621 aa8.8□□□□□ -1
MSH6-211ENST00000606499 PCDHA8Q9Y5H6 950 aa8.8□□□□□ -1
MSH6-211ENST00000606499 BRCA2P51587 3418 aa8.8□□□□□ -1
MSH6-211ENST00000606499 KIAA1217Q5T5P2 1943 aa8.8□□□□□ -1
MSH6-211ENST00000606499 FRMPD4Q14CM0 1322 aa8.8□□□□□ -1
MSH6-211ENST00000606499 DNAH12Q6ZR08 3092 aa8.79□□□□□ -1
MSH6-211ENST00000606499 SPDYE3A6NKU9 549 aa8.79□□□□□ -1
MSH6-211ENST00000606499 MAP2K5Q13163 448 aa8.79□□□□□ -1
MSH6-211ENST00000606499 AP3B2Q13367 1082 aa8.79□□□□□ -1
MSH6-211ENST00000606499 GNL2Q13823 731 aaKnown RBP8.79□□□□□ -1
MSH6-211ENST00000606499 SAFBQ15424 915 aaKnown RBP eCLIP8.79□□□□□ -1
MSH6-211ENST00000606499 GALNT17Q6IS24 598 aa8.79□□□□□ -1
MSH6-211ENST00000606499 DPP9Q86TI2 863 aa8.79□□□□□ -1
MSH6-211ENST00000606499 NPLOC4Q8TAT6 608 aa8.79□□□□□ -1
MSH6-211ENST00000606499 SOCS4Q8WXH5 440 aa8.79□□□□□ -1
MSH6-211ENST00000606499 USP6NLQ92738 828 aa8.79□□□□□ -1
MSH6-211ENST00000606499 RMDN3Q96TC7 470 aa8.79□□□□□ -1
MSH6-211ENST00000606499 ANO3Q9BYT9 981 aa8.79□□□□□ -1
MSH6-211ENST00000606499 GLT8D2Q9H1C3 349 aa8.79□□□□□ -1
MSH6-211ENST00000606499 BRMS1Q9HCU9 246 aa8.79□□□□□ -1
MSH6-211ENST00000606499 PXMP2Q9NR77 195 aa8.79□□□□□ -1
MSH6-211ENST00000606499 GJD2Q9UKL4 321 aa8.79□□□□□ -1
MSH6-211ENST00000606499 RPTORQ8N122 1335 aa8.79□□□□□ -1
MSH6-211ENST00000606499 CCDC194A0A1B0GVG4 234 aa8.78□□□□□ -1
MSH6-211ENST00000606499 ZSCAN22P10073 491 aaPredicted RBP8.78□□□□□ -1
MSH6-211ENST00000606499 CYP2B6P20813 491 aa8.78□□□□□ -1
MSH6-211ENST00000606499 U2AF2P26368 475 aaKnown RBP eCLIP8.78□□□□□ -1
MSH6-211ENST00000606499 RGS2P41220 211 aa8.78□□□□□ -1
MSH6-211ENST00000606499 FLT3LGP49771 235 aa8.78□□□□□ -1
MSH6-211ENST00000606499 ALDH5A1P51649 535 aaPredicted RBP8.78□□□□□ -1
MSH6-211ENST00000606499 LBX1P52954 281 aa8.78□□□□□ -1
MSH6-211ENST00000606499 RESTQ13127 1097 aa8.78□□□□□ -1
MSH6-211ENST00000606499 NONOQ15233 471 aaKnown RBP eCLIP8.78□□□□□ -1
MSH6-211ENST00000606499 CCL14Q16627 93 aa8.78□□□□□ -1
MSH6-211ENST00000606499 ZNF792Q3KQV3 632 aa8.78□□□□□ -1
MSH6-211ENST00000606499 ARHGEF16Q5VV41 709 aa8.78□□□□□ -1
MSH6-211ENST00000606499 PIK3AP1Q6ZUJ8 805 aa8.78□□□□□ -1
MSH6-211ENST00000606499 KRT25Q7Z3Z0 450 aa8.78□□□□□ -1
MSH6-211ENST00000606499 NOSTRINQ8IVI9 506 aa8.78□□□□□ -1
MSH6-211ENST00000606499 SAMD3Q8N6K7 520 aa8.78□□□□□ -1
MSH6-211ENST00000606499 MAML3Q96JK9 1138 aa8.78□□□□□ -1
MSH6-211ENST00000606499 ZFP91Q96JP5 570 aaPredicted RBP8.78□□□□□ -1
MSH6-211ENST00000606499 APBA2Q99767 749 aa8.78□□□□□ -1
MSH6-211ENST00000606499 NUDT12Q9BQG2 462 aa8.78□□□□□ -1
MSH6-211ENST00000606499 PDCD2LQ9BRP1 358 aa8.78□□□□□ -1
MSH6-211ENST00000606499 FOXP1Q9H334 677 aaPredicted RBP8.78□□□□□ -1
MSH6-211ENST00000606499 MAP3K20Q9NYL2 800 aaKnown RBP8.78□□□□□ -1
MSH6-211ENST00000606499 ZDHHC9Q9Y397 364 aa8.78□□□□□ -1
MSH6-211ENST00000606499 DOCK5Q9H7D0 1870 aa8.78□□□□□ -1
MSH6-211ENST00000606499 WNT7AO00755 349 aa8.77□□□□□ -1.01
MSH6-211ENST00000606499 FOSP01100 380 aaPredicted RBP8.77□□□□□ -1.01
MSH6-211ENST00000606499 HOXC6P09630 235 aa8.77□□□□□ -1.01
MSH6-211ENST00000606499 SREBF1P36956 1147 aa8.77□□□□□ -1.01
MSH6-211ENST00000606499 CTCFP49711 727 aaPredicted RBP8.77□□□□□ -1.01
MSH6-211ENST00000606499 ARHGAP4P98171 946 aa8.77□□□□□ -1.01
MSH6-211ENST00000606499 C1QBPQ07021 282 aaKnown RBP8.77□□□□□ -1.01
MSH6-211ENST00000606499 PGM5Q15124 567 aa8.77□□□□□ -1.01
MSH6-211ENST00000606499 INF2Q27J81 1249 aa8.77□□□□□ -1.01
MSH6-211ENST00000606499 MCTP2Q6DN12 878 aa8.77□□□□□ -1.01
MSH6-211ENST00000606499 FAM173BQ6P4H8 233 aa8.77□□□□□ -1.01
MSH6-211ENST00000606499 OTOP1Q7RTM1 612 aa8.77□□□□□ -1.01
MSH6-211ENST00000606499 TEX2Q8IWB9 1127 aa8.77□□□□□ -1.01
MSH6-211ENST00000606499 DNERQ8NFT8 737 aa8.77□□□□□ -1.01
MSH6-211ENST00000606499 NSUN6Q8TEA1 469 aaKnown RBP8.77□□□□□ -1.01
MSH6-211ENST00000606499 TBCKQ8TEA7 893 aa8.77□□□□□ -1.01
MSH6-211ENST00000606499 CRYGNQ8WXF5 182 aa8.77□□□□□ -1.01
MSH6-211ENST00000606499 MAF1Q9H063 256 aa8.77□□□□□ -1.01
MSH6-211ENST00000606499 FLRT1Q9NZU1 646 aa8.77□□□□□ -1.01
MSH6-211ENST00000606499 ADD3Q9UEY8 706 aaKnown RBP8.77□□□□□ -1.01
MSH6-211ENST00000606499 SRRDQ9UH36 339 aa8.77□□□□□ -1.01
MSH6-211ENST00000606499 TRIM17Q9Y577 477 aa8.77□□□□□ -1.01
MSH6-211ENST00000606499 FRMPD3Q5JV73 1810 aa8.77□□□□□ -1.01
MSH6-211ENST00000606499 EDIL3O43854 480 aa8.76□□□□□ -1.01
MSH6-211ENST00000606499 TDP2O95551 362 aa8.76□□□□□ -1.01
MSH6-211ENST00000606499 BRD1O95696 1058 aa8.76□□□□□ -1.01
MSH6-211ENST00000606499 F13A1P00488 732 aa8.76□□□□□ -1.01
MSH6-211ENST00000606499 GNRH1P01148 92 aa8.76□□□□□ -1.01
MSH6-211ENST00000606499 NR3C2P08235 984 aa8.76□□□□□ -1.01
MSH6-211ENST00000606499 MYCLP12524 364 aaPredicted RBP8.76□□□□□ -1.01
MSH6-211ENST00000606499 ELNP15502 786 aa8.76□□□□□ -1.01
MSH6-211ENST00000606499 EDNRBP24530 442 aa8.76□□□□□ -1.01
MSH6-211ENST00000606499 CCND2P30279 289 aa8.76□□□□□ -1.01
MSH6-211ENST00000606499 MRPS9P82933 396 aaKnown RBP8.76□□□□□ -1.01
MSH6-211ENST00000606499 NBR1Q14596 966 aa8.76□□□□□ -1.01
MSH6-211ENST00000606499 FOXD4L6Q3SYB3 417 aaPredicted RBP8.76□□□□□ -1.01
MSH6-211ENST00000606499 PCNX4Q63HM2 1172 aa8.76□□□□□ -1.01
MSH6-211ENST00000606499 FOXD4L3Q6VB84 417 aaPredicted RBP8.76□□□□□ -1.01
MSH6-211ENST00000606499 ARMCX2Q7L311 632 aa8.76□□□□□ -1.01
MSH6-211ENST00000606499 ZNF467Q7Z7K2 595 aaPredicted RBP8.76□□□□□ -1.01
MSH6-211ENST00000606499 TRIB2Q92519 343 aa8.76□□□□□ -1.01
MSH6-211ENST00000606499 EHMT1Q9H9B1 1298 aa8.76□□□□□ -1.01
MSH6-211ENST00000606499 SLC5A4Q9NY91 659 aa8.76□□□□□ -1.01
MSH6-211ENST00000606499 DIS3Q9Y2L1 958 aaKnown RBP8.76□□□□□ -1.01
MSH6-211ENST00000606499 PTCH2Q9Y6C5 1203 aa8.76□□□□□ -1.01
MSH6-211ENST00000606499 FAM86B1E9PN63 330 aa8.75□□□□□ -1.01
MSH6-211ENST00000606499 FAM86B2P0C5J1 330 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms