RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 ARHGEF16Q5VV41 709 aa27.46■■□□□ 1.99
SSX2IP-209ENST00000603677 APOA5Q6Q788 366 aa27.46■■□□□ 1.99
SSX2IP-209ENST00000603677 CHRDL2Q6WN34 429 aa27.46■■□□□ 1.99
SSX2IP-209ENST00000603677 EEPD1Q7L9B9 569 aa27.46■■□□□ 1.99
SSX2IP-209ENST00000603677 ANKRD33Q7Z3H0 272 aa27.46■■□□□ 1.99
SSX2IP-209ENST00000603677 LENG1Q96BZ8 264 aaPredicted RBP27.46■■□□□ 1.99
SSX2IP-209ENST00000603677 TAAR1Q96RJ0 339 aa27.46■■□□□ 1.99
SSX2IP-209ENST00000603677 PDGFCQ9NRA1 345 aa27.46■■□□□ 1.99
SSX2IP-209ENST00000603677 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.45■■□□□ 1.98
SSX2IP-209ENST00000603677 CTAGE5O15320 804 aa27.45■■□□□ 1.98
SSX2IP-209ENST00000603677 EIF3JO75822 258 aaKnown RBP27.45■■□□□ 1.98
SSX2IP-209ENST00000603677 FSCN1Q16658 493 aaKnown RBP27.45■■□□□ 1.98
SSX2IP-209ENST00000603677 TBC1D5Q92609 795 aa27.45■■□□□ 1.98
SSX2IP-209ENST00000603677 FERMT2Q96AC1 680 aa27.45■■□□□ 1.98
SSX2IP-209ENST00000603677 SNX14Q9Y5W7 946 aa27.45■■□□□ 1.98
SSX2IP-209ENST00000603677 DYNC1LI2O43237 492 aaPredicted RBP27.44■■□□□ 1.98
SSX2IP-209ENST00000603677 CPT1AP50416 773 aa27.44■■□□□ 1.98
SSX2IP-209ENST00000603677 KCNV1Q6PIU1 500 aa27.44■■□□□ 1.98
SSX2IP-209ENST00000603677 BLOC1S2Q6QNY1 142 aa27.44■■□□□ 1.98
SSX2IP-209ENST00000603677 SRBD1Q8N5C6 995 aaKnown RBP27.44■■□□□ 1.98
SSX2IP-209ENST00000603677 MYL10Q9BUA6 226 aa27.44■■□□□ 1.98
SSX2IP-209ENST00000603677 PXMP2Q9NR77 195 aa27.44■■□□□ 1.98
SSX2IP-209ENST00000603677 ATP11BQ9Y2G3 1177 aa27.44■■□□□ 1.98
SSX2IP-209ENST00000603677 CCDC196A0A1B0GTZ2 297 aa27.43■■□□□ 1.98
SSX2IP-209ENST00000603677 KPNA6O60684 536 aa27.43■■□□□ 1.98
SSX2IP-209ENST00000603677 TMTC3Q6ZXV5 915 aa27.43■■□□□ 1.98
SSX2IP-209ENST00000603677 POLR3EQ9NVU0 708 aa27.43■■□□□ 1.98
SSX2IP-209ENST00000603677 COL20A1Q9P218 1284 aa27.43■■□□□ 1.98
SSX2IP-209ENST00000603677 ZMYND8Q9ULU4 1186 aaPredicted RBP27.43■■□□□ 1.98
SSX2IP-209ENST00000603677 A0A0U1RQG5 324 aaPredicted RBP27.42■■□□□ 1.98
SSX2IP-209ENST00000603677 PIK3CDO00329 1044 aa27.42■■□□□ 1.98
SSX2IP-209ENST00000603677 ZBTB43O43298 467 aa27.42■■□□□ 1.98
SSX2IP-209ENST00000603677 STAM2O75886 525 aa27.42■■□□□ 1.98
SSX2IP-209ENST00000603677 NR3C2P08235 984 aa27.42■■□□□ 1.98
SSX2IP-209ENST00000603677 FGD1P98174 961 aa27.42■■□□□ 1.98
SSX2IP-209ENST00000603677 TRIM60Q495X7 471 aa27.42■■□□□ 1.98
SSX2IP-209ENST00000603677 LRRC2Q9BYS8 371 aa27.42■■□□□ 1.98
SSX2IP-209ENST00000603677 MYADML2A6NDP7 307 aa27.41■■□□□ 1.98
SSX2IP-209ENST00000603677 DCDC2CA8MYV0 355 aa27.41■■□□□ 1.98
SSX2IP-209ENST00000603677 CDK7P50613 346 aa27.41■■□□□ 1.98
SSX2IP-209ENST00000603677 COL9A3Q14050 684 aaPredicted RBP27.41■■□□□ 1.98
SSX2IP-209ENST00000603677 MICU3Q86XE3 530 aa27.41■■□□□ 1.98
SSX2IP-209ENST00000603677 CUL5Q93034 780 aa27.41■■□□□ 1.98
SSX2IP-209ENST00000603677 JAKMIP1Q96N16 626 aaKnown RBP27.41■■□□□ 1.98
SSX2IP-209ENST00000603677 LBHD1Q9BQE6 289 aaPredicted RBP27.41■■□□□ 1.98
SSX2IP-209ENST00000603677 PDCD2LQ9BRP1 358 aa27.41■■□□□ 1.98
SSX2IP-209ENST00000603677 AGXT2Q9BYV1 514 aa27.41■■□□□ 1.98
SSX2IP-209ENST00000603677 RBM27Q9P2N5 1060 aaKnown RBP27.41■■□□□ 1.98
SSX2IP-209ENST00000603677 KIAA1217Q5T5P2 1943 aa27.41■■□□□ 1.98
SSX2IP-209ENST00000603677 hCG_1984214I3L0E3 225 aa27.4■■□□□ 1.98
SSX2IP-209ENST00000603677 TGFB3P10600 412 aa27.4■■□□□ 1.98
SSX2IP-209ENST00000603677 TLE2Q04725 743 aa27.4■■□□□ 1.98
SSX2IP-209ENST00000603677 CCDC62Q6P9F0 684 aa27.4■■□□□ 1.98
SSX2IP-209ENST00000603677 VSIG10LQ86VR7 867 aa27.4■■□□□ 1.98
SSX2IP-209ENST00000603677 ZNF713Q8N859 430 aaPredicted RBP27.4■■□□□ 1.98
SSX2IP-209ENST00000603677 USP26Q9BXU7 913 aa27.4■■□□□ 1.98
SSX2IP-209ENST00000603677 TM6SF1Q9BZW5 370 aa27.4■■□□□ 1.98
SSX2IP-209ENST00000603677 ARVCFO00192 962 aa27.39■■□□□ 1.98
SSX2IP-209ENST00000603677 PLEKHA8P1O95397 391 aa27.39■■□□□ 1.98
SSX2IP-209ENST00000603677 TXNP10599 105 aaKnown RBP27.39■■□□□ 1.98
SSX2IP-209ENST00000603677 RTN1Q16799 776 aa27.39■■□□□ 1.98
SSX2IP-209ENST00000603677 XRRA1Q6P2D8 792 aa27.39■■□□□ 1.98
SSX2IP-209ENST00000603677 SLC43A3Q8NBI5 491 aa27.39■■□□□ 1.98
SSX2IP-209ENST00000603677 FRMPD4Q14CM0 1322 aa27.39■■□□□ 1.97
SSX2IP-209ENST00000603677 A6NJR5 290 aa27.38■■□□□ 1.97
SSX2IP-209ENST00000603677 CLTBP09497 229 aa27.38■■□□□ 1.97
SSX2IP-209ENST00000603677 SYN1P17600 705 aa27.38■■□□□ 1.97
SSX2IP-209ENST00000603677 RPS6KB1P23443 525 aa27.38■■□□□ 1.97
SSX2IP-209ENST00000603677 MAGEA10P43363 369 aaPredicted RBP27.38■■□□□ 1.97
SSX2IP-209ENST00000603677 VTI1AQ96AJ9 217 aa27.38■■□□□ 1.97
SSX2IP-209ENST00000603677 DDX49Q9Y6V7 483 aaKnown RBP27.38■■□□□ 1.97
SSX2IP-209ENST00000603677 RANBP2P49792 3224 aaKnown RBP27.37■■□□□ 1.97
SSX2IP-209ENST00000603677 TRIOBPQ9H2D6 2365 aa27.37■■□□□ 1.97
SSX2IP-209ENST00000603677 NID2Q14112 1375 aa27.37■■□□□ 1.97
SSX2IP-209ENST00000603677 EIF2AK2P19525 551 aaKnown RBP27.37■■□□□ 1.97
SSX2IP-209ENST00000603677 PGM5Q15124 567 aa27.37■■□□□ 1.97
SSX2IP-209ENST00000603677 OR6J1Q8NGC5 347 aa27.37■■□□□ 1.97
SSX2IP-209ENST00000603677 EMID1Q96A84 441 aaPredicted RBP27.37■■□□□ 1.97
SSX2IP-209ENST00000603677 PDLIM7Q9NR12 457 aa27.37■■□□□ 1.97
SSX2IP-209ENST00000603677 BRPF3Q9ULD4 1205 aa27.37■■□□□ 1.97
SSX2IP-209ENST00000603677 KLF18A0A0U1RQI7 1052 aa27.36■■□□□ 1.97
SSX2IP-209ENST00000603677 KIAA0355O15063 1070 aa27.36■■□□□ 1.97
SSX2IP-209ENST00000603677 TLR3O15455 904 aaKnown RBP27.36■■□□□ 1.97
SSX2IP-209ENST00000603677 GH1P01241 217 aa27.36■■□□□ 1.97
SSX2IP-209ENST00000603677 RXRAP19793 462 aa27.36■■□□□ 1.97
SSX2IP-209ENST00000603677 CCND2P30279 289 aa27.36■■□□□ 1.97
SSX2IP-209ENST00000603677 EVCP57679 992 aa27.36■■□□□ 1.97
SSX2IP-209ENST00000603677 BEX3Q00994 111 aa27.36■■□□□ 1.97
SSX2IP-209ENST00000603677 PPP1R18Q6NYC8 613 aa27.36■■□□□ 1.97
SSX2IP-209ENST00000603677 Q6ZUG5 572 aa27.36■■□□□ 1.97
SSX2IP-209ENST00000603677 GLT8D2Q9H1C3 349 aa27.36■■□□□ 1.97
SSX2IP-209ENST00000603677 ZSWIM6Q9HCJ5 1215 aa27.36■■□□□ 1.97
SSX2IP-209ENST00000603677 HOXA13P31271 388 aaPredicted RBP27.35■■□□□ 1.97
SSX2IP-209ENST00000603677 RUFY3Q7L099 469 aa27.35■■□□□ 1.97
SSX2IP-209ENST00000603677 SMARCC2Q8TAQ2 1214 aa27.35■■□□□ 1.97
SSX2IP-209ENST00000603677 PSTPIP2Q9H939 334 aa27.35■■□□□ 1.97
SSX2IP-209ENST00000603677 GOLGA8AA7E2F4 631 aa27.34■■□□□ 1.97
SSX2IP-209ENST00000603677 GOLGA8BA8MQT2 603 aa27.34■■□□□ 1.97
SSX2IP-209ENST00000603677 CASTP20810 708 aaKnown RBP27.34■■□□□ 1.97
SSX2IP-209ENST00000603677 GNPTABQ3T906 1256 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms