RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 MCF2L2Q86YR7 1114 aa19.84■□□□□ 0.77
SCAF1-204ENST00000601038 RPUSD2Q8IZ73 545 aaKnown RBP19.84■□□□□ 0.77
SCAF1-204ENST00000601038 SYTL5Q8TDW5 730 aaPredicted RBP19.84■□□□□ 0.77
SCAF1-204ENST00000601038 NSUN6Q8TEA1 469 aaKnown RBP19.84■□□□□ 0.77
SCAF1-204ENST00000601038 PBX4Q9BYU1 374 aa19.84■□□□□ 0.77
SCAF1-204ENST00000601038 WNT8AQ9H1J5 351 aa19.84■□□□□ 0.77
SCAF1-204ENST00000601038 SUPT16HQ9Y5B9 1047 aaKnown RBP19.84■□□□□ 0.77
SCAF1-204ENST00000601038 DHX16O60231 1041 aaKnown RBP19.83■□□□□ 0.77
SCAF1-204ENST00000601038 PDE4AP27815 886 aa19.83■□□□□ 0.77
SCAF1-204ENST00000601038 PBX2P40425 430 aa19.83■□□□□ 0.77
SCAF1-204ENST00000601038 IFIT1BQ5T764 474 aaKnown RBP19.83■□□□□ 0.77
SCAF1-204ENST00000601038 TTC22Q5TAA0 569 aa19.83■□□□□ 0.77
SCAF1-204ENST00000601038 FBXO11Q86XK2 927 aa19.83■□□□□ 0.77
SCAF1-204ENST00000601038 COPS5Q92905 334 aa19.83■□□□□ 0.77
SCAF1-204ENST00000601038 TAAR1Q96RJ0 339 aa19.83■□□□□ 0.77
SCAF1-204ENST00000601038 JMJD4Q9H9V9 463 aa19.83■□□□□ 0.77
SCAF1-204ENST00000601038 VAT1LQ9HCJ6 419 aa19.83■□□□□ 0.77
SCAF1-204ENST00000601038 TRMT13Q9NUP7 481 aaKnown RBP19.83■□□□□ 0.77
SCAF1-204ENST00000601038 CXXC1Q9P0U4 656 aaPredicted RBP19.83■□□□□ 0.77
SCAF1-204ENST00000601038 MRPL11Q9Y3B7 192 aaKnown RBP19.83■□□□□ 0.77
SCAF1-204ENST00000601038 GSPT1P15170 499 aaKnown RBP19.82■□□□□ 0.76
SCAF1-204ENST00000601038 SEC23AQ15436 765 aa19.82■□□□□ 0.76
SCAF1-204ENST00000601038 NBPF20Q3BBV1 942 aa19.82■□□□□ 0.76
SCAF1-204ENST00000601038 NFRKBQ6P4R8 1299 aa19.82■□□□□ 0.76
SCAF1-204ENST00000601038 CCDC62Q6P9F0 684 aa19.82■□□□□ 0.76
SCAF1-204ENST00000601038 IWS1Q96ST2 819 aa19.82■□□□□ 0.76
SCAF1-204ENST00000601038 COL20A1Q9P218 1284 aa19.82■□□□□ 0.76
SCAF1-204ENST00000601038 SCN10AQ9Y5Y9 1956 aa19.81■□□□□ 0.76
SCAF1-204ENST00000601038 ARIH2O95376 493 aa19.81■□□□□ 0.76
SCAF1-204ENST00000601038 RAB30Q15771 203 aa19.81■□□□□ 0.76
SCAF1-204ENST00000601038 OTOP2Q7RTS6 562 aa19.81■□□□□ 0.76
SCAF1-204ENST00000601038 STAG2Q8N3U4 1231 aa19.81■□□□□ 0.76
SCAF1-204ENST00000601038 RUFY2Q8WXA3 655 aa19.81■□□□□ 0.76
SCAF1-204ENST00000601038 RMDN3Q96TC7 470 aa19.81■□□□□ 0.76
SCAF1-204ENST00000601038 COL25A1Q9BXS0 654 aaPredicted RBP19.81■□□□□ 0.76
SCAF1-204ENST00000601038 MSRAQ9UJ68 235 aa19.81■□□□□ 0.76
SCAF1-204ENST00000601038 CYP2C9P11712 490 aa19.8■□□□□ 0.76
SCAF1-204ENST00000601038 PTPN11Q06124 597 aaPredicted RBP19.8■□□□□ 0.76
SCAF1-204ENST00000601038 TRDNQ13061 729 aa19.8■□□□□ 0.76
SCAF1-204ENST00000601038 STXBP2Q15833 593 aa19.8■□□□□ 0.76
SCAF1-204ENST00000601038 FAM47CQ5HY64 1035 aa19.8■□□□□ 0.76
SCAF1-204ENST00000601038 SEPT14Q6ZU15 432 aa19.8■□□□□ 0.76
SCAF1-204ENST00000601038 CYB5R4Q7L1T6 521 aa19.8■□□□□ 0.76
SCAF1-204ENST00000601038 VWCEQ96DN2 955 aa19.8■□□□□ 0.76
SCAF1-204ENST00000601038 SCLYQ96I15 445 aa19.8■□□□□ 0.76
SCAF1-204ENST00000601038 AMNQ9BXJ7 453 aa19.8■□□□□ 0.76
SCAF1-204ENST00000601038 A0A0C4DFX4 3053 aa19.8■□□□□ 0.76
SCAF1-204ENST00000601038 MYH6P13533 1939 aa19.79■□□□□ 0.76
SCAF1-204ENST00000601038 KLRF2D3W0D1 207 aa19.79■□□□□ 0.76
SCAF1-204ENST00000601038 PFKMP08237 780 aa19.79■□□□□ 0.76
SCAF1-204ENST00000601038 MTMR8Q96EF0 704 aa19.79■□□□□ 0.76
SCAF1-204ENST00000601038 U3KPZ7 1027 aaPredicted RBP19.79■□□□□ 0.76
SCAF1-204ENST00000601038 PALM3A6NDB9 673 aaPredicted RBP19.78■□□□□ 0.76
SCAF1-204ENST00000601038 GH1P01241 217 aa19.78■□□□□ 0.76
SCAF1-204ENST00000601038 CHMLP26374 656 aa19.78■□□□□ 0.76
SCAF1-204ENST00000601038 LY6KQ17RY6 165 aa19.78■□□□□ 0.76
SCAF1-204ENST00000601038 ARHGEF16Q5VV41 709 aa19.78■□□□□ 0.76
SCAF1-204ENST00000601038 AFG1LQ8WV93 481 aa19.78■□□□□ 0.76
SCAF1-204ENST00000601038 MAP3K20Q9NYL2 800 aaKnown RBP19.78■□□□□ 0.76
SCAF1-204ENST00000601038 MAD2L2Q9UI95 211 aa19.78■□□□□ 0.76
SCAF1-204ENST00000601038 SLC4A7Q9Y6M7 1214 aa19.78■□□□□ 0.76
SCAF1-204ENST00000601038 MYO9BQ13459 2157 aa19.77■□□□□ 0.76
SCAF1-204ENST00000601038 OPLAHO14841 1288 aa19.77■□□□□ 0.76
SCAF1-204ENST00000601038 ZBTB5O15062 677 aa19.77■□□□□ 0.76
SCAF1-204ENST00000601038 EIF3JO75822 258 aaKnown RBP19.77■□□□□ 0.76
SCAF1-204ENST00000601038 CFBP00751 764 aa19.77■□□□□ 0.76
SCAF1-204ENST00000601038 NR3C2P08235 984 aa19.77■□□□□ 0.76
SCAF1-204ENST00000601038 CYP21A2P08686 494 aa19.77■□□□□ 0.76
SCAF1-204ENST00000601038 HSD17B4P51659 736 aa19.77■□□□□ 0.76
SCAF1-204ENST00000601038 GHRHRQ02643 423 aa19.77■□□□□ 0.76
SCAF1-204ENST00000601038 PTH1RQ03431 593 aa19.77■□□□□ 0.76
SCAF1-204ENST00000601038 ARHGAP1Q07960 439 aa19.77■□□□□ 0.76
SCAF1-204ENST00000601038 SAMD3Q8N6K7 520 aa19.77■□□□□ 0.76
SCAF1-204ENST00000601038 GAS2L1Q99501 681 aaPredicted RBP19.77■□□□□ 0.76
SCAF1-204ENST00000601038 PXMP2Q9NR77 195 aa19.77■□□□□ 0.76
SCAF1-204ENST00000601038 PITPNM1O00562 1244 aa19.76■□□□□ 0.75
SCAF1-204ENST00000601038 MMP3P08254 477 aa19.76■□□□□ 0.75
SCAF1-204ENST00000601038 EIF2AK2P19525 551 aaKnown RBP19.76■□□□□ 0.75
SCAF1-204ENST00000601038 RFC2P35250 354 aa19.76■□□□□ 0.75
SCAF1-204ENST00000601038 RETREG2Q8NC44 543 aa19.76■□□□□ 0.75
SCAF1-204ENST00000601038 PPP1R13LQ8WUF5 828 aa19.76■□□□□ 0.75
SCAF1-204ENST00000601038 NKX2-4Q9H2Z4 354 aa19.76■□□□□ 0.75
SCAF1-204ENST00000601038 SLC28A3Q9HAS3 691 aa19.76■□□□□ 0.75
SCAF1-204ENST00000601038 DDX41Q9UJV9 622 aaKnown RBP19.76■□□□□ 0.75
SCAF1-204ENST00000601038 PCDHA1Q9Y5I3 950 aa19.76■□□□□ 0.75
SCAF1-204ENST00000601038 KIAA1217Q5T5P2 1943 aa19.75■□□□□ 0.75
SCAF1-204ENST00000601038 ERICH2A1L162 156 aa19.75■□□□□ 0.75
SCAF1-204ENST00000601038 IFIT3O14879 490 aaKnown RBP19.75■□□□□ 0.75
SCAF1-204ENST00000601038 PPP1R11O60927 126 aaPredicted RBP19.75■□□□□ 0.75
SCAF1-204ENST00000601038 CASTP20810 708 aaKnown RBP19.75■□□□□ 0.75
SCAF1-204ENST00000601038 TRAF1Q13077 416 aa19.75■□□□□ 0.75
SCAF1-204ENST00000601038 BFSP2Q13515 415 aa19.75■□□□□ 0.75
SCAF1-204ENST00000601038 GRM4Q14833 912 aa19.75■□□□□ 0.75
SCAF1-204ENST00000601038 STOX1Q6ZVD7 989 aa19.75■□□□□ 0.75
SCAF1-204ENST00000601038 DEFB128Q7Z7B8 93 aa19.75■□□□□ 0.75
SCAF1-204ENST00000601038 EMID1Q96A84 441 aaPredicted RBP19.75■□□□□ 0.75
SCAF1-204ENST00000601038 PRDM12Q9H4Q4 367 aa19.75■□□□□ 0.75
SCAF1-204ENST00000601038 RIOX1Q9H6W3 641 aa19.75■□□□□ 0.75
SCAF1-204ENST00000601038 YBX2Q9Y2T7 364 aaKnown RBP19.75■□□□□ 0.75
SCAF1-204ENST00000601038 CDH23Q9H251 3354 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms