RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	RAD9A	Q99638	391 aa		13.15	□□□□□ -0.3
NUP62-222	ENST00000600935	PRR12	Q9ULL5	1215 aa		13.15	□□□□□ -0.3
NUP62-222	ENST00000600935	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	13.15	□□□□□ -0.3
NUP62-222	ENST00000600935	C19orf67	A6NJJ6	358 aa		13.14	□□□□□ -0.31
NUP62-222	ENST00000600935		H3BQ06	376 aa	Predicted RBP	13.14	□□□□□ -0.31
NUP62-222	ENST00000600935	NFIB	O00712	420 aa		13.14	□□□□□ -0.31
NUP62-222	ENST00000600935	MCC	P23508	829 aa		13.14	□□□□□ -0.31
NUP62-222	ENST00000600935	SLC1A4	P43007	532 aa		13.14	□□□□□ -0.31
NUP62-222	ENST00000600935	RBL2	Q08999	1139 aa		13.14	□□□□□ -0.31
NUP62-222	ENST00000600935	BAAT	Q14032	418 aa	Predicted RBP	13.14	□□□□□ -0.31
NUP62-222	ENST00000600935	COL19A1	Q14993	1142 aa		13.14	□□□□□ -0.31
NUP62-222	ENST00000600935	CNKSR3	Q6P9H4	555 aa		13.14	□□□□□ -0.31
NUP62-222	ENST00000600935	KCTD1	Q719H9	257 aa		13.14	□□□□□ -0.31
NUP62-222	ENST00000600935	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.14	□□□□□ -0.31
NUP62-222	ENST00000600935	CAGE1	Q8TC20	777 aa		13.14	□□□□□ -0.31
NUP62-222	ENST00000600935	C17orf80	Q9BSJ5	609 aa		13.14	□□□□□ -0.31
NUP62-222	ENST00000600935	ZBED2	Q9BTP6	218 aa		13.14	□□□□□ -0.31
NUP62-222	ENST00000600935	GPHN	Q9NQX3	736 aa	Predicted RBP	13.14	□□□□□ -0.31
NUP62-222	ENST00000600935	MICAL3	Q7RTP6	2002 aa		13.13	□□□□□ -0.31
NUP62-222	ENST00000600935	CACNA1H	O95180	2353 aa		13.13	□□□□□ -0.31
NUP62-222	ENST00000600935	LOC102724159	A0A0B4J2E5	919 aa		13.13	□□□□□ -0.31
NUP62-222	ENST00000600935	ICAM1	P05362	532 aa		13.13	□□□□□ -0.31
NUP62-222	ENST00000600935	SELP	P16109	830 aa		13.13	□□□□□ -0.31
NUP62-222	ENST00000600935	MKRN4P	Q13434	485 aa	Predicted RBP	13.13	□□□□□ -0.31
NUP62-222	ENST00000600935	PWP2	Q15269	919 aa	Known RBP	13.13	□□□□□ -0.31
NUP62-222	ENST00000600935	PTGIS	Q16647	500 aa		13.13	□□□□□ -0.31
NUP62-222	ENST00000600935	GDF6	Q6KF10	455 aa	Predicted RBP	13.13	□□□□□ -0.31
NUP62-222	ENST00000600935	TRAF7	Q6Q0C0	670 aa		13.13	□□□□□ -0.31
NUP62-222	ENST00000600935	BCL11A	Q9H165	835 aa		13.13	□□□□□ -0.31
NUP62-222	ENST00000600935	CCPG1	Q9ULG6	757 aa		13.13	□□□□□ -0.31
NUP62-222	ENST00000600935	KPNA6	O60684	536 aa		13.12	□□□□□ -0.31
NUP62-222	ENST00000600935	ARIH2	O95376	493 aa		13.12	□□□□□ -0.31
NUP62-222	ENST00000600935	EDNRB	P24530	442 aa		13.12	□□□□□ -0.31
NUP62-222	ENST00000600935	IK	Q13123	557 aa	Predicted RBP	13.12	□□□□□ -0.31
NUP62-222	ENST00000600935	MBTPS1	Q14703	1052 aa		13.12	□□□□□ -0.31
NUP62-222	ENST00000600935	PUS10	Q3MIT2	529 aa	Known RBP	13.12	□□□□□ -0.31
NUP62-222	ENST00000600935	ZSCAN25	Q6NSZ9	544 aa		13.12	□□□□□ -0.31
NUP62-222	ENST00000600935	SLC30A10	Q6XR72	485 aa		13.12	□□□□□ -0.31
NUP62-222	ENST00000600935	LRRC8D	Q7L1W4	858 aa		13.12	□□□□□ -0.31
NUP62-222	ENST00000600935	SESTD1	Q86VW0	696 aa		13.12	□□□□□ -0.31
NUP62-222	ENST00000600935	KAT2B	Q92831	832 aa		13.12	□□□□□ -0.31
NUP62-222	ENST00000600935	MRPL38	Q96DV4	380 aa	Known RBP	13.12	□□□□□ -0.31
NUP62-222	ENST00000600935	ADD3	Q9UEY8	706 aa	Known RBP	13.12	□□□□□ -0.31
NUP62-222	ENST00000600935	ISY1	Q9ULR0	285 aa	Known RBP	13.12	□□□□□ -0.31
NUP62-222	ENST00000600935	CACNA1A	O00555	2505 aa		13.12	□□□□□ -0.31
NUP62-222	ENST00000600935	NLRC5	Q86WI3	1866 aa		13.11	□□□□□ -0.31
NUP62-222	ENST00000600935	ABHD14A-ACY1	A0A1B0GW23	586 aa		13.11	□□□□□ -0.31
NUP62-222	ENST00000600935	NKRF	O15226	690 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
NUP62-222	ENST00000600935	GPAA1	O43292	621 aa		13.11	□□□□□ -0.31
NUP62-222	ENST00000600935	TSPY3	P0CV98	308 aa		13.11	□□□□□ -0.31
NUP62-222	ENST00000600935	TSPY8	P0CW00	308 aa		13.11	□□□□□ -0.31
NUP62-222	ENST00000600935	CKB	P12277	381 aa		13.11	□□□□□ -0.31
NUP62-222	ENST00000600935	IRS1	P35568	1242 aa		13.11	□□□□□ -0.31
NUP62-222	ENST00000600935	TFAP4	Q01664	338 aa		13.11	□□□□□ -0.31
NUP62-222	ENST00000600935	PPP2R5B	Q15173	497 aa		13.11	□□□□□ -0.31
NUP62-222	ENST00000600935	RCSD1	Q6JBY9	416 aa		13.11	□□□□□ -0.31
NUP62-222	ENST00000600935	FAM117B	Q6P1L5	589 aa		13.11	□□□□□ -0.31
NUP62-222	ENST00000600935	FBXO22	Q8NEZ5	403 aa		13.11	□□□□□ -0.31
NUP62-222	ENST00000600935	PRSS33	Q8NF86	280 aa		13.11	□□□□□ -0.31
NUP62-222	ENST00000600935	SP7	Q8TDD2	431 aa	Predicted RBP	13.11	□□□□□ -0.31
NUP62-222	ENST00000600935	PANK1	Q8TE04	598 aa		13.11	□□□□□ -0.31
NUP62-222	ENST00000600935	CLEC4D	Q8WXI8	215 aa		13.11	□□□□□ -0.31
NUP62-222	ENST00000600935	WNT8B	Q93098	351 aa		13.11	□□□□□ -0.31
NUP62-222	ENST00000600935	RANBP17	Q9H2T7	1088 aa	Known RBP	13.11	□□□□□ -0.31
NUP62-222	ENST00000600935	IL17RB	Q9NRM6	502 aa		13.11	□□□□□ -0.31
NUP62-222	ENST00000600935	PRKAG3	Q9UGI9	489 aa		13.11	□□□□□ -0.31
NUP62-222	ENST00000600935	NOD1	Q9Y239	953 aa		13.11	□□□□□ -0.31
NUP62-222	ENST00000600935	RAD50	Q92878	1312 aa		13.11	□□□□□ -0.31
NUP62-222	ENST00000600935		M0R2C6	588 aa		13.1	□□□□□ -0.31
NUP62-222	ENST00000600935	RAB11FIP3	O75154	756 aa		13.1	□□□□□ -0.31
NUP62-222	ENST00000600935	LTBR	P36941	435 aa		13.1	□□□□□ -0.31
NUP62-222	ENST00000600935	TDO2	P48775	406 aa		13.1	□□□□□ -0.31
NUP62-222	ENST00000600935	HTRA4	P83105	476 aa	Predicted RBP	13.1	□□□□□ -0.31
NUP62-222	ENST00000600935	TRIM71	Q2Q1W2	868 aa	Known RBP	13.1	□□□□□ -0.31
NUP62-222	ENST00000600935	BRDT	Q58F21	947 aa	Predicted RBP	13.1	□□□□□ -0.31
NUP62-222	ENST00000600935	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	13.1	□□□□□ -0.31	3e-8	■■■□□ 14.8
NUP62-222	ENST00000600935	ADHFE1	Q8IWW8	467 aa		13.1	□□□□□ -0.31
NUP62-222	ENST00000600935	CCDC155	Q8N6L0	562 aa		13.1	□□□□□ -0.31
NUP62-222	ENST00000600935	SCFD2	Q8WU76	684 aa		13.1	□□□□□ -0.31
NUP62-222	ENST00000600935	APPBP2	Q92624	585 aa		13.1	□□□□□ -0.31
NUP62-222	ENST00000600935	PABPC5	Q96DU9	382 aa	Known RBP	13.1	□□□□□ -0.31
NUP62-222	ENST00000600935	ZNF287	Q9HBT7	754 aa		13.1	□□□□□ -0.31
NUP62-222	ENST00000600935	DNAH14	Q0VDD8	3507 aa		13.09	□□□□□ -0.31
NUP62-222	ENST00000600935	COL4A6	Q14031	1691 aa		13.09	□□□□□ -0.31
NUP62-222	ENST00000600935	NMT2	O60551	498 aa		13.09	□□□□□ -0.31
NUP62-222	ENST00000600935	PARN	O95453	639 aa	Known RBP	13.09	□□□□□ -0.31
NUP62-222	ENST00000600935	NOV	P48745	357 aa		13.09	□□□□□ -0.31
NUP62-222	ENST00000600935	CHMP4BP1	P59074	171 aa		13.09	□□□□□ -0.31
NUP62-222	ENST00000600935	EPC2	Q52LR7	807 aa		13.09	□□□□□ -0.31
NUP62-222	ENST00000600935	TCEAL5	Q5H9L2	206 aa		13.09	□□□□□ -0.31
NUP62-222	ENST00000600935	TTBK2	Q6IQ55	1244 aa		13.09	□□□□□ -0.31
NUP62-222	ENST00000600935	CCDC62	Q6P9F0	684 aa		13.09	□□□□□ -0.31
NUP62-222	ENST00000600935	KMT2E	Q8IZD2	1858 aa		13.09	□□□□□ -0.31
NUP62-222	ENST00000600935	IFNL3	Q8IZI9	196 aa		13.09	□□□□□ -0.31
NUP62-222	ENST00000600935	KBTBD3	Q8NAB2	608 aa		13.09	□□□□□ -0.31
NUP62-222	ENST00000600935	AFG1L	Q8WV93	481 aa		13.09	□□□□□ -0.31
NUP62-222	ENST00000600935	KIAA1217	Q5T5P2	1943 aa		13.08	□□□□□ -0.32
NUP62-222	ENST00000600935	PTPDC1	A2A3K4	754 aa		13.08	□□□□□ -0.32
NUP62-222	ENST00000600935	EFCAB14	O75071	495 aa		13.08	□□□□□ -0.32
NUP62-222	ENST00000600935	MMP3	P08254	477 aa		13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms