RNA–Protein interactions for RNA: ENST00000600528.1

COPE-210, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 261 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-210ENST00000600528 FTOQ9C0B1 505 aaKnown RBP eCLIP11.06□□□□□ -0.64
COPE-210ENST00000600528 SUGCTQ9HAC7 445 aa11.06□□□□□ -0.64
COPE-210ENST00000600528 SCN10AQ9Y5Y9 1956 aa11.06□□□□□ -0.64
COPE-210ENST00000600528 MYH7P12883 1935 aa11.05□□□□□ -0.64
COPE-210ENST00000600528 PATL2C9JE40 543 aaKnown RBP11.05□□□□□ -0.64
COPE-210ENST00000600528 NKRFO15226 690 aaKnown RBP eCLIP11.05□□□□□ -0.64
COPE-210ENST00000600528 GPAA1O43292 621 aa11.05□□□□□ -0.64
COPE-210ENST00000600528 ICAM1P05362 532 aa11.05□□□□□ -0.64
COPE-210ENST00000600528 PDE4AP27815 886 aa11.05□□□□□ -0.64
COPE-210ENST00000600528 NOVP48745 357 aa11.05□□□□□ -0.64
COPE-210ENST00000600528 PDE1AP54750 535 aa11.05□□□□□ -0.64
COPE-210ENST00000600528 ERVK-21P61565 698 aa11.05□□□□□ -0.64
COPE-210ENST00000600528 WDR5P61964 334 aaKnown RBP11.05□□□□□ -0.64
COPE-210ENST00000600528 TFAP4Q01664 338 aa11.05□□□□□ -0.64
COPE-210ENST00000600528 PDE4BQ07343 736 aa11.05□□□□□ -0.64
COPE-210ENST00000600528 BAATQ14032 418 aaPredicted RBP11.05□□□□□ -0.64
COPE-210ENST00000600528 PPP4R3BQ5MIZ7 849 aa11.05□□□□□ -0.64
COPE-210ENST00000600528 NSMFQ6X4W1 530 aa11.05□□□□□ -0.64
COPE-210ENST00000600528 KCTD1Q719H9 257 aa11.05□□□□□ -0.64
COPE-210ENST00000600528 PLEKHM2Q8IWE5 1019 aa11.05□□□□□ -0.64
COPE-210ENST00000600528 IFNL3Q8IZI9 196 aa11.05□□□□□ -0.64
COPE-210ENST00000600528 OR6J1Q8NGC5 347 aa11.05□□□□□ -0.64
COPE-210ENST00000600528 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.05□□□□□ -0.64
COPE-210ENST00000600528 PI4K2BQ8TCG2 481 aa11.05□□□□□ -0.64
COPE-210ENST00000600528 AFAP1L1Q8TED9 768 aa11.05□□□□□ -0.64
COPE-210ENST00000600528 CTAGE1Q96RT6 745 aa11.05□□□□□ -0.64
COPE-210ENST00000600528 NACAP1Q9BZK3 213 aa11.05□□□□□ -0.64
COPE-210ENST00000600528 UBE2ZQ9H832 354 aaPredicted RBP11.05□□□□□ -0.64
COPE-210ENST00000600528 GPHNQ9NQX3 736 aaPredicted RBP11.05□□□□□ -0.64
COPE-210ENST00000600528 CCPG1Q9ULG6 757 aa11.05□□□□□ -0.64
COPE-210ENST00000600528 TET1Q8NFU7 2136 aa11.05□□□□□ -0.64
COPE-210ENST00000600528 BRWD1Q9NSI6 2320 aa11.04□□□□□ -0.64
COPE-210ENST00000600528 LCTP09848 1927 aa11.04□□□□□ -0.64
COPE-210ENST00000600528 POTEB3A0JP26 581 aa11.04□□□□□ -0.64
COPE-210ENST00000600528 GJB5O95377 273 aa11.04□□□□□ -0.64
COPE-210ENST00000600528 CXCL10P02778 98 aa11.04□□□□□ -0.64
COPE-210ENST00000600528 EDNRBP24530 442 aa11.04□□□□□ -0.64
COPE-210ENST00000600528 KCNJ6P48051 423 aa11.04□□□□□ -0.64
COPE-210ENST00000600528 TDO2P48775 406 aa11.04□□□□□ -0.64
COPE-210ENST00000600528 SNAP25P60880 206 aa11.04□□□□□ -0.64
COPE-210ENST00000600528 RBL2Q08999 1139 aa11.04□□□□□ -0.64
COPE-210ENST00000600528 IKQ13123 557 aaPredicted RBP11.04□□□□□ -0.64
COPE-210ENST00000600528 BRDTQ58F21 947 aaPredicted RBP11.04□□□□□ -0.64
COPE-210ENST00000600528 FAM47CQ5HY64 1035 aa11.04□□□□□ -0.64
COPE-210ENST00000600528 POTEBQ6S5H4 581 aa11.04□□□□□ -0.64
COPE-210ENST00000600528 BTNL9Q6UXG8 535 aa11.04□□□□□ -0.64
COPE-210ENST00000600528 SESTD1Q86VW0 696 aa11.04□□□□□ -0.64
COPE-210ENST00000600528 CAGE1Q8TC20 777 aa11.04□□□□□ -0.64
COPE-210ENST00000600528 EVI5LQ96CN4 794 aa11.04□□□□□ -0.64
COPE-210ENST00000600528 RAD9AQ99638 391 aa11.04□□□□□ -0.64
COPE-210ENST00000600528 KCNH6Q9H252 994 aa11.04□□□□□ -0.64
COPE-210ENST00000600528 RANBP17Q9H2T7 1088 aaKnown RBP11.04□□□□□ -0.64
COPE-210ENST00000600528 OSBPL3Q9H4L5 887 aa11.04□□□□□ -0.64
COPE-210ENST00000600528 IL17RBQ9NRM6 502 aa11.04□□□□□ -0.64
COPE-210ENST00000600528 M0R2C6 588 aa11.03□□□□□ -0.64
COPE-210ENST00000600528 PARNO95453 639 aaKnown RBP11.03□□□□□ -0.64
COPE-210ENST00000600528 ALADP13716 330 aa11.03□□□□□ -0.64
COPE-210ENST00000600528 TSHZ3Q63HK5 1081 aa11.03□□□□□ -0.64
COPE-210ENST00000600528 GDPD5Q8WTR4 605 aa11.03□□□□□ -0.64
COPE-210ENST00000600528 SCFD2Q8WU76 684 aa11.03□□□□□ -0.64
COPE-210ENST00000600528 TGS1Q96RS0 853 aaKnown RBP11.03□□□□□ -0.64
COPE-210ENST00000600528 FSD1Q9BTV5 496 aa11.03□□□□□ -0.64
COPE-210ENST00000600528 RAD50Q92878 1312 aa11.03□□□□□ -0.64
COPE-210ENST00000600528 TANC1Q9C0D5 1861 aa11.02□□□□□ -0.64
COPE-210ENST00000600528 PTPRSQ13332 1948 aa11.02□□□□□ -0.65
COPE-210ENST00000600528 ABHD14A-ACY1A0A1B0GW23 586 aa11.02□□□□□ -0.65
COPE-210ENST00000600528 LINC01553A4QN01 128 aa11.02□□□□□ -0.65
COPE-210ENST00000600528 GRXCR2A6NFK2 248 aa11.02□□□□□ -0.65
COPE-210ENST00000600528 NFIBO00712 420 aa11.02□□□□□ -0.65
COPE-210ENST00000600528 APPP05067 770 aa11.02□□□□□ -0.65
COPE-210ENST00000600528 SLC3A2P08195 630 aaKnown RBP11.02□□□□□ -0.65
COPE-210ENST00000600528 IL9P15248 144 aa11.02□□□□□ -0.65
COPE-210ENST00000600528 SELPP16109 830 aa11.02□□□□□ -0.65
COPE-210ENST00000600528 MRE11P49959 708 aa11.02□□□□□ -0.65
COPE-210ENST00000600528 DEFB103AP81534 67 aa11.02□□□□□ -0.65
COPE-210ENST00000600528 PPARAQ07869 468 aa11.02□□□□□ -0.65
COPE-210ENST00000600528 PPP2R5BQ15173 497 aa11.02□□□□□ -0.65
COPE-210ENST00000600528 PTGISQ16647 500 aa11.02□□□□□ -0.65
COPE-210ENST00000600528 PUS10Q3MIT2 529 aaKnown RBP11.02□□□□□ -0.65
COPE-210ENST00000600528 CNKSR3Q6P9H4 555 aa11.02□□□□□ -0.65
COPE-210ENST00000600528 TMCO2Q7Z6W1 182 aaPredicted RBP11.02□□□□□ -0.65
COPE-210ENST00000600528 NEK9Q8TD19 979 aa11.02□□□□□ -0.65
COPE-210ENST00000600528 PPP1R13LQ8WUF5 828 aa11.02□□□□□ -0.65
COPE-210ENST00000600528 CLEC4DQ8WXI8 215 aa11.02□□□□□ -0.65
COPE-210ENST00000600528 COPS5Q92905 334 aa11.02□□□□□ -0.65
COPE-210ENST00000600528 ZBED2Q9BTP6 218 aa11.02□□□□□ -0.65
COPE-210ENST00000600528 ISY1Q9ULR0 285 aaKnown RBP11.02□□□□□ -0.65
COPE-210ENST00000600528 STX8Q9UNK0 236 aa11.02□□□□□ -0.65
COPE-210ENST00000600528 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.02□□□□□ -0.65
COPE-210ENST00000600528 COL4A4P53420 1690 aaPredicted RBP11.01□□□□□ -0.65
COPE-210ENST00000600528 NBNO60934 754 aa11.01□□□□□ -0.65
COPE-210ENST00000600528 EFCAB14O75071 495 aa11.01□□□□□ -0.65
COPE-210ENST00000600528 KCNA5P22460 613 aa11.01□□□□□ -0.65
COPE-210ENST00000600528 NHLH1Q02575 133 aa11.01□□□□□ -0.65
COPE-210ENST00000600528 TCTN1Q2MV58 587 aa11.01□□□□□ -0.65
COPE-210ENST00000600528 ZMYM1Q5SVZ6 1142 aa11.01□□□□□ -0.65
COPE-210ENST00000600528 PTCRAQ6ISU1 281 aaPredicted RBP11.01□□□□□ -0.65
COPE-210ENST00000600528 GDF6Q6KF10 455 aaPredicted RBP11.01□□□□□ -0.65
COPE-210ENST00000600528 CCDC62Q6P9F0 684 aa11.01□□□□□ -0.65
COPE-210ENST00000600528 LRRC8DQ7L1W4 858 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms