RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 PHKBQ93100 1093 aa14.95□□□□□ -0.02
SRRM1-223ENST00000600523 TBC1D32Q96NH3 1257 aa14.95□□□□□ -0.02
SRRM1-223ENST00000600523 C6orf50Q9HD87 102 aa14.95□□□□□ -0.02
SRRM1-223ENST00000600523 BAZ2BQ9UIF8 2168 aaKnown RBP14.94□□□□□ -0.02
SRRM1-223ENST00000600523 SMCO2A6NFE2 343 aa14.94□□□□□ -0.02
SRRM1-223ENST00000600523 FOSP01100 380 aaPredicted RBP14.94□□□□□ -0.02
SRRM1-223ENST00000600523 ZNF865P0CJ78 1059 aaPredicted RBP14.94□□□□□ -0.02
SRRM1-223ENST00000600523 EN2P19622 333 aaPredicted RBP14.94□□□□□ -0.02
SRRM1-223ENST00000600523 CCND2P30279 289 aa14.94□□□□□ -0.02
SRRM1-223ENST00000600523 MCM2P49736 904 aa14.94□□□□□ -0.02
SRRM1-223ENST00000600523 CCDC144BQ3MJ40 725 aa14.94□□□□□ -0.02
SRRM1-223ENST00000600523 EEPD1Q7L9B9 569 aa14.94□□□□□ -0.02
SRRM1-223ENST00000600523 TBC1D5Q92609 795 aa14.94□□□□□ -0.02
SRRM1-223ENST00000600523 FGD4Q96M96 766 aa14.94□□□□□ -0.02
SRRM1-223ENST00000600523 PURBQ96QR8 312 aaKnown RBP14.94□□□□□ -0.02
SRRM1-223ENST00000600523 TAAR1Q96RJ0 339 aa14.94□□□□□ -0.02
SRRM1-223ENST00000600523 PXMP2Q9NR77 195 aa14.94□□□□□ -0.02
SRRM1-223ENST00000600523 SH2B1Q9NRF2 756 aaPredicted RBP14.94□□□□□ -0.02
SRRM1-223ENST00000600523 RBBP6Q7Z6E9 1792 aaKnown RBP14.93□□□□□ -0.02
SRRM1-223ENST00000600523 KBTBD13C9JR72 458 aa14.93□□□□□ -0.02
SRRM1-223ENST00000600523 STXBP3O00186 592 aa14.93□□□□□ -0.02
SRRM1-223ENST00000600523 OPLAHO14841 1288 aa14.93□□□□□ -0.02
SRRM1-223ENST00000600523 EIF3JO75822 258 aaKnown RBP14.93□□□□□ -0.02
SRRM1-223ENST00000600523 MYCNP04198 464 aaPredicted RBP14.93□□□□□ -0.02
SRRM1-223ENST00000600523 MYCLP12524 364 aaPredicted RBP14.93□□□□□ -0.02
SRRM1-223ENST00000600523 EIF2AK2P19525 551 aaKnown RBP14.93□□□□□ -0.02
SRRM1-223ENST00000600523 TNFAIP2Q03169 654 aa14.93□□□□□ -0.02
SRRM1-223ENST00000600523 SCRN1Q12765 414 aa14.93□□□□□ -0.02
SRRM1-223ENST00000600523 NTRK3Q16288 839 aa14.93□□□□□ -0.02
SRRM1-223ENST00000600523 IQSEC1Q6DN90 963 aa14.93□□□□□ -0.02
SRRM1-223ENST00000600523 RNF180Q86T96 592 aa14.93□□□□□ -0.02
SRRM1-223ENST00000600523 FAM177A1Q8N128 213 aaPredicted RBP14.93□□□□□ -0.02
SRRM1-223ENST00000600523 TRPV1Q8NER1 839 aa14.93□□□□□ -0.02
SRRM1-223ENST00000600523 MORC4Q8TE76 937 aa14.93□□□□□ -0.02
SRRM1-223ENST00000600523 SCFD2Q8WU76 684 aa14.93□□□□□ -0.02
SRRM1-223ENST00000600523 GTF3C6Q969F1 213 aa14.93□□□□□ -0.02
SRRM1-223ENST00000600523 CRISPLD2Q9H0B8 497 aa14.93□□□□□ -0.02
SRRM1-223ENST00000600523 AP5M1Q9H0R1 490 aa14.93□□□□□ -0.02
SRRM1-223ENST00000600523 RIC8AQ9NPQ8 531 aa14.93□□□□□ -0.02
SRRM1-223ENST00000600523 XPNPEP3Q9NQH7 507 aa14.93□□□□□ -0.02
SRRM1-223ENST00000600523 SH3GLB2Q9NR46 395 aa14.93□□□□□ -0.02
SRRM1-223ENST00000600523 OGDHLQ9ULD0 1010 aa14.93□□□□□ -0.02
SRRM1-223ENST00000600523 ESYT2A0FGR8 921 aa14.92□□□□□ -0.02
SRRM1-223ENST00000600523 DUSP11O75319 330 aaKnown RBP14.92□□□□□ -0.02
SRRM1-223ENST00000600523 STAM2O75886 525 aa14.92□□□□□ -0.02
SRRM1-223ENST00000600523 FARP2O94887 1054 aaPredicted RBP14.92□□□□□ -0.02
SRRM1-223ENST00000600523 NR3C2P08235 984 aa14.92□□□□□ -0.02
SRRM1-223ENST00000600523 EDNRBP24530 442 aa14.92□□□□□ -0.02
SRRM1-223ENST00000600523 NLRP5P59047 1200 aa14.92□□□□□ -0.02
SRRM1-223ENST00000600523 TTLL4Q14679 1199 aa14.92□□□□□ -0.02
SRRM1-223ENST00000600523 ME3Q16798 604 aa14.92□□□□□ -0.02
SRRM1-223ENST00000600523 GNPTABQ3T906 1256 aa14.92□□□□□ -0.02
SRRM1-223ENST00000600523 BRDTQ58F21 947 aaPredicted RBP14.92□□□□□ -0.02
SRRM1-223ENST00000600523 XRRA1Q6P2D8 792 aa14.92□□□□□ -0.02
SRRM1-223ENST00000600523 NECAB2Q7Z6G3 386 aa14.92□□□□□ -0.02
SRRM1-223ENST00000600523 FBXO16Q8IX29 292 aaPredicted RBP14.92□□□□□ -0.02
SRRM1-223ENST00000600523 COL20A1Q9P218 1284 aa14.92□□□□□ -0.02
SRRM1-223ENST00000600523 STK36Q9NRP7 1315 aa14.92□□□□□ -0.02
SRRM1-223ENST00000600523 NKRFO15226 690 aaKnown RBP eCLIP14.91□□□□□ -0.02
SRRM1-223ENST00000600523 AP3B2Q13367 1082 aa14.91□□□□□ -0.02
SRRM1-223ENST00000600523 ANO1Q5XXA6 986 aa14.91□□□□□ -0.02
SRRM1-223ENST00000600523 LHX8Q68G74 356 aa14.91□□□□□ -0.02
SRRM1-223ENST00000600523 KCNV1Q6PIU1 500 aa14.91□□□□□ -0.02
SRRM1-223ENST00000600523 USP17L6PQ6QN14 398 aa14.91□□□□□ -0.02
SRRM1-223ENST00000600523 REXO1Q8N1G1 1221 aaKnown RBP14.91□□□□□ -0.02
SRRM1-223ENST00000600523 NECAB1Q8N987 351 aa14.91□□□□□ -0.02
SRRM1-223ENST00000600523 KIF2CQ99661 725 aa14.91□□□□□ -0.02
SRRM1-223ENST00000600523 PDCD2LQ9BRP1 358 aa14.91□□□□□ -0.02
SRRM1-223ENST00000600523 WDR11Q9BZH6 1224 aa14.91□□□□□ -0.02
SRRM1-223ENST00000600523 ASTN1O14525 1302 aa14.91□□□□□ -0.02
SRRM1-223ENST00000600523 SMCHD1A6NHR9 2005 aa14.9□□□□□ -0.02
SRRM1-223ENST00000600523 DNM1LO00429 736 aa14.9□□□□□ -0.02
SRRM1-223ENST00000600523 MEIS2O14770 477 aa14.9□□□□□ -0.02
SRRM1-223ENST00000600523 ZEB2O60315 1214 aa14.9□□□□□ -0.02
SRRM1-223ENST00000600523 PPFIA3O75145 1194 aa14.9□□□□□ -0.02
SRRM1-223ENST00000600523 ADCYAP1R1P41586 468 aa14.9□□□□□ -0.02
SRRM1-223ENST00000600523 MLLT1Q03111 559 aaPredicted RBP14.9□□□□□ -0.02
SRRM1-223ENST00000600523 TRIM29Q14134 588 aa14.9□□□□□ -0.02
SRRM1-223ENST00000600523 PGM5Q15124 567 aa14.9□□□□□ -0.02
SRRM1-223ENST00000600523 GALNT17Q6IS24 598 aa14.9□□□□□ -0.02
SRRM1-223ENST00000600523 SEPT14Q6ZU15 432 aa14.9□□□□□ -0.02
SRRM1-223ENST00000600523 PCSK9Q8NBP7 692 aaKnown RBP14.9□□□□□ -0.02
SRRM1-223ENST00000600523 LLPHQ9BRT6 129 aaKnown RBP14.9□□□□□ -0.02
SRRM1-223ENST00000600523 HTATIP2Q9BUP3 242 aa14.9□□□□□ -0.02
SRRM1-223ENST00000600523 ZMYND12Q9H0C1 365 aa14.9□□□□□ -0.02
SRRM1-223ENST00000600523 ORC3Q9UBD5 711 aaPredicted RBP14.9□□□□□ -0.02
SRRM1-223ENST00000600523 Q9Y3F1 56 aa14.9□□□□□ -0.02
SRRM1-223ENST00000600523 KIF3AQ9Y496 699 aa14.9□□□□□ -0.02
SRRM1-223ENST00000600523 MRVI1Q9Y6F6 885 aa14.9□□□□□ -0.02
SRRM1-223ENST00000600523 C6orf222P0C671 652 aaPredicted RBP14.89□□□□□ -0.03
SRRM1-223ENST00000600523 TXNP10599 105 aaKnown RBP14.89□□□□□ -0.03
SRRM1-223ENST00000600523 RGS19P49795 217 aa14.89□□□□□ -0.03
SRRM1-223ENST00000600523 PKN1Q16512 942 aa14.89□□□□□ -0.03
SRRM1-223ENST00000600523 UBE2SQ16763 222 aa14.89□□□□□ -0.03
SRRM1-223ENST00000600523 PCNX4Q63HM2 1172 aa14.89□□□□□ -0.03
SRRM1-223ENST00000600523 NLRX1Q86UT6 975 aa14.89□□□□□ -0.03
SRRM1-223ENST00000600523 VSIG10LQ86VR7 867 aa14.89□□□□□ -0.03
SRRM1-223ENST00000600523 CDHR1Q96JP9 859 aa14.89□□□□□ -0.03
SRRM1-223ENST00000600523 KATNBL1Q9H079 304 aa14.89□□□□□ -0.03
SRRM1-223ENST00000600523 BRMS1Q9HCU9 246 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms