RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 RMDN3Q96TC7 470 aa16.81■□□□□ 0.28
LTBP4-228ENST00000600499 TMEM106CQ9BVX2 250 aa16.81■□□□□ 0.28
LTBP4-228ENST00000600499 RNF208Q9H0X6 261 aa16.81■□□□□ 0.28
LTBP4-228ENST00000600499 PXMP2Q9NR77 195 aa16.81■□□□□ 0.28
LTBP4-228ENST00000600499 CNPY2Q9Y2B0 182 aa16.81■□□□□ 0.28
LTBP4-228ENST00000600499 LRRC37A2A6NM11 1700 aa16.8■□□□□ 0.28
LTBP4-228ENST00000600499 RBM47A0AV96 593 aaKnown RBP16.8■□□□□ 0.28
LTBP4-228ENST00000600499 SGPL1O95470 568 aa16.8■□□□□ 0.28
LTBP4-228ENST00000600499 FDPSP14324 419 aaKnown RBP16.8■□□□□ 0.28
LTBP4-228ENST00000600499 HOXA13P31271 388 aaPredicted RBP16.8■□□□□ 0.28
LTBP4-228ENST00000600499 CLK2P49760 499 aaKnown RBP16.8■□□□□ 0.28
LTBP4-228ENST00000600499 NAPAP54920 295 aa16.8■□□□□ 0.28
LTBP4-228ENST00000600499 ACVR2BQ13705 512 aa16.8■□□□□ 0.28
LTBP4-228ENST00000600499 NECAB1Q8N987 351 aa16.8■□□□□ 0.28
LTBP4-228ENST00000600499 NSUN7Q8NE18 718 aaKnown RBP16.8■□□□□ 0.28
LTBP4-228ENST00000600499 CCDC12Q8WUD4 166 aaPredicted RBP16.8■□□□□ 0.28
LTBP4-228ENST00000600499 CUL5Q93034 780 aa16.8■□□□□ 0.28
LTBP4-228ENST00000600499 SHISA4Q96DD7 197 aa16.8■□□□□ 0.28
LTBP4-228ENST00000600499 MPHOSPH6Q99547 160 aaKnown RBP16.8■□□□□ 0.28
LTBP4-228ENST00000600499 PDCD2LQ9BRP1 358 aa16.8■□□□□ 0.28
LTBP4-228ENST00000600499 LLPHQ9BRT6 129 aaKnown RBP16.8■□□□□ 0.28
LTBP4-228ENST00000600499 VTA1Q9NP79 307 aa16.8■□□□□ 0.28
LTBP4-228ENST00000600499 SMCO2A6NFE2 343 aa16.79■□□□□ 0.28
LTBP4-228ENST00000600499 CD2BP2O95400 341 aaKnown RBP16.79■□□□□ 0.28
LTBP4-228ENST00000600499 PRAMEF19Q5SWL8 479 aa16.79■□□□□ 0.28
LTBP4-228ENST00000600499 TAPT1Q6NXT6 567 aa16.79■□□□□ 0.28
LTBP4-228ENST00000600499 USP17L6PQ6QN14 398 aa16.79■□□□□ 0.28
LTBP4-228ENST00000600499 NOL8Q76FK4 1167 aaKnown RBP16.79■□□□□ 0.28
LTBP4-228ENST00000600499 VSIG10LQ86VR7 867 aa16.79■□□□□ 0.28
LTBP4-228ENST00000600499 SMARCC2Q8TAQ2 1214 aa16.79■□□□□ 0.28
LTBP4-228ENST00000600499 DDX20Q9UHI6 824 aaKnown RBP16.79■□□□□ 0.28
LTBP4-228ENST00000600499 OGDHLQ9ULD0 1010 aa16.79■□□□□ 0.28
LTBP4-228ENST00000600499 FOSP01100 380 aaPredicted RBP16.78■□□□□ 0.28
LTBP4-228ENST00000600499 NR3C2P08235 984 aa16.78■□□□□ 0.28
LTBP4-228ENST00000600499 NKX3-2P78367 333 aa16.78■□□□□ 0.28
LTBP4-228ENST00000600499 PGM5Q15124 567 aa16.78■□□□□ 0.28
LTBP4-228ENST00000600499 MCTP2Q6DN12 878 aa16.78■□□□□ 0.28
LTBP4-228ENST00000600499 XRRA1Q6P2D8 792 aa16.78■□□□□ 0.28
LTBP4-228ENST00000600499 CCDC148Q8NFR7 591 aa16.78■□□□□ 0.28
LTBP4-228ENST00000600499 U2AF1L4Q8WU68 220 aaKnown RBP16.78■□□□□ 0.28
LTBP4-228ENST00000600499 POTEFA5A3E0 1075 aa16.77■□□□□ 0.28
LTBP4-228ENST00000600499 CCDC85CA6NKD9 419 aa16.77■□□□□ 0.28
LTBP4-228ENST00000600499 EIF3JO75822 258 aaKnown RBP16.77■□□□□ 0.28
LTBP4-228ENST00000600499 AKR1A1P14550 325 aa16.77■□□□□ 0.28
LTBP4-228ENST00000600499 GNA11P29992 359 aa16.77■□□□□ 0.28
LTBP4-228ENST00000600499 ADCY7P51828 1080 aa16.77■□□□□ 0.28
LTBP4-228ENST00000600499 AP3B2Q13367 1082 aa16.77■□□□□ 0.28
LTBP4-228ENST00000600499 STXBP2Q15833 593 aa16.77■□□□□ 0.28
LTBP4-228ENST00000600499 ARHGEF16Q5VV41 709 aa16.77■□□□□ 0.28
LTBP4-228ENST00000600499 IQSEC1Q6DN90 963 aa16.77■□□□□ 0.28
LTBP4-228ENST00000600499 GALNT17Q6IS24 598 aa16.77■□□□□ 0.28
LTBP4-228ENST00000600499 WASF1Q92558 559 aa16.77■□□□□ 0.28
LTBP4-228ENST00000600499 DEFB118Q96PH6 123 aa16.77■□□□□ 0.28
LTBP4-228ENST00000600499 C6orf50Q9HD87 102 aa16.77■□□□□ 0.28
LTBP4-228ENST00000600499 FAM184BQ9ULE4 1060 aa16.77■□□□□ 0.28
LTBP4-228ENST00000600499 FRMPD3Q5JV73 1810 aa16.76■□□□□ 0.27
LTBP4-228ENST00000600499 PPFIA3O75145 1194 aa16.76■□□□□ 0.27
LTBP4-228ENST00000600499 STAM2O75886 525 aa16.76■□□□□ 0.27
LTBP4-228ENST00000600499 RGS19P49795 217 aa16.76■□□□□ 0.27
LTBP4-228ENST00000600499 PDE4DQ08499 809 aa16.76■□□□□ 0.27
LTBP4-228ENST00000600499 NPY5RQ15761 445 aa16.76■□□□□ 0.27
LTBP4-228ENST00000600499 CCDC144BQ3MJ40 725 aa16.76■□□□□ 0.27
LTBP4-228ENST00000600499 FCHSD1Q86WN1 690 aa16.76■□□□□ 0.27
LTBP4-228ENST00000600499 ANKLE1Q8NAG6 615 aa16.76■□□□□ 0.27
LTBP4-228ENST00000600499 DAGLBQ8NCG7 672 aa16.76■□□□□ 0.27
LTBP4-228ENST00000600499 TMX3Q96JJ7 454 aa16.76■□□□□ 0.27
LTBP4-228ENST00000600499 VPS54Q9P1Q0 977 aa16.76■□□□□ 0.27
LTBP4-228ENST00000600499 ORC3Q9UBD5 711 aaPredicted RBP16.76■□□□□ 0.27
LTBP4-228ENST00000600499 Q9Y3F1 56 aa16.76■□□□□ 0.27
LTBP4-228ENST00000600499 DDX49Q9Y6V7 483 aaKnown RBP16.76■□□□□ 0.27
LTBP4-228ENST00000600499 KIAA1217Q5T5P2 1943 aa16.75■□□□□ 0.27
LTBP4-228ENST00000600499 M0R2N6 131 aa16.75■□□□□ 0.27
LTBP4-228ENST00000600499 DUSP11O75319 330 aaKnown RBP16.75■□□□□ 0.27
LTBP4-228ENST00000600499 RGS20O76081 388 aa16.75■□□□□ 0.27
LTBP4-228ENST00000600499 EIF2AK2P19525 551 aaKnown RBP16.75■□□□□ 0.27
LTBP4-228ENST00000600499 UBE2SQ16763 222 aa16.75■□□□□ 0.27
LTBP4-228ENST00000600499 PCNX4Q63HM2 1172 aa16.75■□□□□ 0.27
LTBP4-228ENST00000600499 UBE2Q1Q7Z7E8 422 aa16.75■□□□□ 0.27
LTBP4-228ENST00000600499 CCDC83Q8IWF9 413 aa16.75■□□□□ 0.27
LTBP4-228ENST00000600499 FBXO16Q8IX29 292 aaPredicted RBP16.75■□□□□ 0.27
LTBP4-228ENST00000600499 IL31RAQ8NI17 732 aa16.75■□□□□ 0.27
LTBP4-228ENST00000600499 BICD2Q8TD16 824 aa16.75■□□□□ 0.27
LTBP4-228ENST00000600499 CRYGNQ8WXF5 182 aa16.75■□□□□ 0.27
LTBP4-228ENST00000600499 AIFM3Q96NN9 605 aa16.75■□□□□ 0.27
LTBP4-228ENST00000600499 PHF20Q9BVI0 1012 aa16.75■□□□□ 0.27
LTBP4-228ENST00000600499 PCDHA6Q9UN73 950 aa16.75■□□□□ 0.27
LTBP4-228ENST00000600499 GNEQ9Y223 722 aaKnown RBP16.75■□□□□ 0.27
LTBP4-228ENST00000600499 PCDHA8Q9Y5H6 950 aa16.75■□□□□ 0.27
LTBP4-228ENST00000600499 SPDYE3A6NKU9 549 aa16.74■□□□□ 0.27
LTBP4-228ENST00000600499 ADCY6O43306 1168 aa16.74■□□□□ 0.27
LTBP4-228ENST00000600499 JAK2O60674 1132 aa16.74■□□□□ 0.27
LTBP4-228ENST00000600499 MYCP01106 439 aaPredicted RBP16.74■□□□□ 0.27
LTBP4-228ENST00000600499 CNGA1P29973 690 aa16.74■□□□□ 0.27
LTBP4-228ENST00000600499 CCND2P30279 289 aa16.74■□□□□ 0.27
LTBP4-228ENST00000600499 MNX1P50219 401 aaPredicted RBP16.74■□□□□ 0.27
LTBP4-228ENST00000600499 MRPS9P82933 396 aaKnown RBP16.74■□□□□ 0.27
LTBP4-228ENST00000600499 HMGN5P82970 282 aaKnown RBP16.74■□□□□ 0.27
LTBP4-228ENST00000600499 CCDC62Q6P9F0 684 aa16.74■□□□□ 0.27
LTBP4-228ENST00000600499 SNX21Q969T3 373 aa16.74■□□□□ 0.27
LTBP4-228ENST00000600499 INPP4AQ96PE3 977 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms