RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 RMDN3Q96TC7 470 aa14.04□□□□□ -0.16
TGFB1-204ENST00000600196 APBA2Q99767 749 aa14.04□□□□□ -0.16
TGFB1-204ENST00000600196 PRDM10Q9NQV6 1147 aa14.04□□□□□ -0.16
TGFB1-204ENST00000600196 ATP6V1DQ9Y5K8 247 aa14.04□□□□□ -0.16
TGFB1-204ENST00000600196 SYNGAP1Q96PV0 1343 aa14.04□□□□□ -0.16
TGFB1-204ENST00000600196 EIF3JO75822 258 aaKnown RBP14.03□□□□□ -0.16
TGFB1-204ENST00000600196 HSPA8P11142 646 aaKnown RBP14.03□□□□□ -0.16
TGFB1-204ENST00000600196 GCFC2P16383 781 aaKnown RBP14.03□□□□□ -0.16
TGFB1-204ENST00000600196 RILPL1Q5EBL4 403 aa14.03□□□□□ -0.16
TGFB1-204ENST00000600196 PCNX4Q63HM2 1172 aa14.03□□□□□ -0.16
TGFB1-204ENST00000600196 USP17L6PQ6QN14 398 aa14.03□□□□□ -0.16
TGFB1-204ENST00000600196 TBC1D5Q92609 795 aa14.03□□□□□ -0.16
TGFB1-204ENST00000600196 SHISA4Q96DD7 197 aa14.03□□□□□ -0.16
TGFB1-204ENST00000600196 PDCD2LQ9BRP1 358 aa14.03□□□□□ -0.16
TGFB1-204ENST00000600196 PXMP2Q9NR77 195 aa14.03□□□□□ -0.16
TGFB1-204ENST00000600196 KCNJ14Q9UNX9 436 aa14.03□□□□□ -0.16
TGFB1-204ENST00000600196 MTMR6Q9Y217 621 aa14.03□□□□□ -0.16
TGFB1-204ENST00000600196 CYP3A7-CYP3A51PA0A087WV96 503 aa14.02□□□□□ -0.17
TGFB1-204ENST00000600196 BTBD18B2RXH4 712 aa14.02□□□□□ -0.17
TGFB1-204ENST00000600196 PEX10O60683 326 aa14.02□□□□□ -0.17
TGFB1-204ENST00000600196 COBLO75128 1261 aa14.02□□□□□ -0.17
TGFB1-204ENST00000600196 PPFIA3O75145 1194 aa14.02□□□□□ -0.17
TGFB1-204ENST00000600196 NR3C2P08235 984 aa14.02□□□□□ -0.17
TGFB1-204ENST00000600196 HSPA1AP0DMV8 641 aaKnown RBP14.02□□□□□ -0.17
TGFB1-204ENST00000600196 HSPA1BP0DMV9 641 aaKnown RBP14.02□□□□□ -0.17
TGFB1-204ENST00000600196 TGFB3P10600 412 aa14.02□□□□□ -0.17
TGFB1-204ENST00000600196 CYP3A7P24462 503 aa14.02□□□□□ -0.17
TGFB1-204ENST00000600196 ALDH5A1P51649 535 aaPredicted RBP14.02□□□□□ -0.17
TGFB1-204ENST00000600196 GNL2Q13823 731 aaKnown RBP14.02□□□□□ -0.17
TGFB1-204ENST00000600196 STXBP2Q15833 593 aa14.02□□□□□ -0.17
TGFB1-204ENST00000600196 ARHGEF16Q5VV41 709 aa14.02□□□□□ -0.17
TGFB1-204ENST00000600196 PPP4R3AQ6IN85 833 aa14.02□□□□□ -0.17
TGFB1-204ENST00000600196 MAML3Q96JK9 1138 aa14.02□□□□□ -0.17
TGFB1-204ENST00000600196 CDHR1Q96JP9 859 aa14.02□□□□□ -0.17
TGFB1-204ENST00000600196 TAAR1Q96RJ0 339 aa14.02□□□□□ -0.17
TGFB1-204ENST00000600196 ANO3Q9BYT9 981 aa14.02□□□□□ -0.17
TGFB1-204ENST00000600196 BIN2Q9UBW5 565 aaPredicted RBP14.02□□□□□ -0.17
TGFB1-204ENST00000600196 NOL7Q9UMY1 257 aaKnown RBP14.02□□□□□ -0.17
TGFB1-204ENST00000600196 MORC2Q9Y6X9 1032 aaPredicted RBP14.02□□□□□ -0.17
TGFB1-204ENST00000600196 SMCHD1A6NHR9 2005 aa14.02□□□□□ -0.17
TGFB1-204ENST00000600196 SOWAHBA6NEL2 793 aa14.01□□□□□ -0.17
TGFB1-204ENST00000600196 BRD1O95696 1058 aa14.01□□□□□ -0.17
TGFB1-204ENST00000600196 BMP15O95972 392 aa14.01□□□□□ -0.17
TGFB1-204ENST00000600196 ZSCAN22P10073 491 aaPredicted RBP14.01□□□□□ -0.17
TGFB1-204ENST00000600196 CTGFP29279 349 aa14.01□□□□□ -0.17
TGFB1-204ENST00000600196 CCND2P30279 289 aa14.01□□□□□ -0.17
TGFB1-204ENST00000600196 FLT3LGP49771 235 aa14.01□□□□□ -0.17
TGFB1-204ENST00000600196 SLC30A10Q6XR72 485 aa14.01□□□□□ -0.17
TGFB1-204ENST00000600196 FCHSD1Q86WN1 690 aa14.01□□□□□ -0.17
TGFB1-204ENST00000600196 SLAIN1Q8ND83 568 aa14.01□□□□□ -0.17
TGFB1-204ENST00000600196 CD99L2Q8TCZ2 262 aa14.01□□□□□ -0.17
TGFB1-204ENST00000600196 TINF2Q9BSI4 451 aa14.01□□□□□ -0.17
TGFB1-204ENST00000600196 ABHD16BQ9H3Z7 469 aa14.01□□□□□ -0.17
TGFB1-204ENST00000600196 VTA1Q9NP79 307 aa14.01□□□□□ -0.17
TGFB1-204ENST00000600196 TBX3O15119 743 aa14□□□□□ -0.17
TGFB1-204ENST00000600196 FOXN1O15353 648 aa14□□□□□ -0.17
TGFB1-204ENST00000600196 HOXA13P31271 388 aaPredicted RBP14□□□□□ -0.17
TGFB1-204ENST00000600196 ICAM3P32942 547 aa14□□□□□ -0.17
TGFB1-204ENST00000600196 ARHGAP4P98171 946 aa14□□□□□ -0.17
TGFB1-204ENST00000600196 SETQ01105 290 aaPredicted RBP14□□□□□ -0.17
TGFB1-204ENST00000600196 PGM5Q15124 567 aa14□□□□□ -0.17
TGFB1-204ENST00000600196 GNPTABQ3T906 1256 aa14□□□□□ -0.17
TGFB1-204ENST00000600196 JAKMIP3Q5VZ66 844 aa14□□□□□ -0.17
TGFB1-204ENST00000600196 MFSD14CQ5VZR4 134 aa14□□□□□ -0.17
TGFB1-204ENST00000600196 CTU1Q7Z7A3 348 aaKnown RBP14□□□□□ -0.17
TGFB1-204ENST00000600196 NEK8Q86SG6 692 aa14□□□□□ -0.17
TGFB1-204ENST00000600196 NLRX1Q86UT6 975 aa14□□□□□ -0.17
TGFB1-204ENST00000600196 GPRASP2Q96D09 838 aa14□□□□□ -0.17
TGFB1-204ENST00000600196 MBOAT7Q96N66 472 aa14□□□□□ -0.17
TGFB1-204ENST00000600196 COL20A1Q9P218 1284 aa14□□□□□ -0.17
TGFB1-204ENST00000600196 CASP8AP2Q9UKL3 1982 aa14□□□□□ -0.17
TGFB1-204ENST00000600196 ZNFX1Q9P2E3 1918 aaKnown RBP14□□□□□ -0.17
TGFB1-204ENST00000600196 MGAMO43451 1857 aa13.99□□□□□ -0.17
TGFB1-204ENST00000600196 RBM47A0AV96 593 aaKnown RBP13.99□□□□□ -0.17
TGFB1-204ENST00000600196 VPS37CA5D8V6 355 aaPredicted RBP13.99□□□□□ -0.17
TGFB1-204ENST00000600196 MEIS1O00470 390 aa13.99□□□□□ -0.17
TGFB1-204ENST00000600196 LAD1O00515 517 aa13.99□□□□□ -0.17
TGFB1-204ENST00000600196 CNTN2Q02246 1040 aa13.99□□□□□ -0.17
TGFB1-204ENST00000600196 PDE4DQ08499 809 aa13.99□□□□□ -0.17
TGFB1-204ENST00000600196 UBE2SQ16763 222 aa13.99□□□□□ -0.17
TGFB1-204ENST00000600196 OTOP1Q7RTM1 612 aa13.99□□□□□ -0.17
TGFB1-204ENST00000600196 GIMAP8Q8ND71 665 aaPredicted RBP13.99□□□□□ -0.17
TGFB1-204ENST00000600196 RAET1EQ8TD07 263 aa13.99□□□□□ -0.17
TGFB1-204ENST00000600196 OXER1Q8TDS5 423 aa13.99□□□□□ -0.17
TGFB1-204ENST00000600196 TBCKQ8TEA7 893 aa13.99□□□□□ -0.17
TGFB1-204ENST00000600196 FGD4Q96M96 766 aa13.99□□□□□ -0.17
TGFB1-204ENST00000600196 INPP4AQ96PE3 977 aaPredicted RBP13.99□□□□□ -0.17
TGFB1-204ENST00000600196 SENP7Q9BQF6 1050 aa13.99□□□□□ -0.17
TGFB1-204ENST00000600196 GJB4Q9NTQ9 266 aa13.99□□□□□ -0.17
TGFB1-204ENST00000600196 CHMP5Q9NZZ3 219 aa13.99□□□□□ -0.17
TGFB1-204ENST00000600196 PTPN22Q9Y2R2 807 aa13.99□□□□□ -0.17
TGFB1-204ENST00000600196 UBIAD1Q9Y5Z9 338 aa13.99□□□□□ -0.17
TGFB1-204ENST00000600196 NKRFO15226 690 aaKnown RBP eCLIP13.98□□□□□ -0.17
TGFB1-204ENST00000600196 F13A1P00488 732 aa13.98□□□□□ -0.17
TGFB1-204ENST00000600196 PGK2P07205 417 aa13.98□□□□□ -0.17
TGFB1-204ENST00000600196 CYP2B6P20813 491 aa13.98□□□□□ -0.17
TGFB1-204ENST00000600196 PRKCZQ05513 592 aa13.98□□□□□ -0.17
TGFB1-204ENST00000600196 NR5A1Q13285 461 aa13.98□□□□□ -0.17
TGFB1-204ENST00000600196 Q4G0T1 1027 aa13.98□□□□□ -0.17
TGFB1-204ENST00000600196 CEP55Q53EZ4 464 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms