RNA–Protein interactions for RNA: ENST00000599825.2

LSP1P1-201, Transcript of LSP1 pseudogene 1, humanhuman

BASIC

Gene LSP1P1, Length 133 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P1-201ENST00000599825 COL20A1Q9P218 1284 aa11.88□□□□□ -0.51
LSP1P1-201ENST00000599825 MSRAQ9UJ68 235 aa11.88□□□□□ -0.51
LSP1P1-201ENST00000599825 SUPT16HQ9Y5B9 1047 aaKnown RBP11.88□□□□□ -0.51
LSP1P1-201ENST00000599825 ABCB11O95342 1321 aa11.87□□□□□ -0.51
LSP1P1-201ENST00000599825 WDR19Q8NEZ3 1342 aa11.87□□□□□ -0.51
LSP1P1-201ENST00000599825 EYSQ5T1H1 3165 aa11.87□□□□□ -0.51
LSP1P1-201ENST00000599825 UNC80Q8N2C7 3258 aa11.87□□□□□ -0.51
LSP1P1-201ENST00000599825 HIP1O00291 1037 aa11.87□□□□□ -0.51
LSP1P1-201ENST00000599825 CFBP00751 764 aa11.87□□□□□ -0.51
LSP1P1-201ENST00000599825 SNHG28P0DPA3 235 aa11.87□□□□□ -0.51
LSP1P1-201ENST00000599825 PCP11498 1178 aaKnown RBP11.87□□□□□ -0.51
LSP1P1-201ENST00000599825 MYCLP12524 364 aaPredicted RBP11.87□□□□□ -0.51
LSP1P1-201ENST00000599825 PDE4AP27815 886 aa11.87□□□□□ -0.51
LSP1P1-201ENST00000599825 BRDTQ58F21 947 aaPredicted RBP11.87□□□□□ -0.51
LSP1P1-201ENST00000599825 IFIT1BQ5T764 474 aaKnown RBP11.87□□□□□ -0.51
LSP1P1-201ENST00000599825 FBXO11Q86XK2 927 aa11.87□□□□□ -0.51
LSP1P1-201ENST00000599825 STAG2Q8N3U4 1231 aa11.87□□□□□ -0.51
LSP1P1-201ENST00000599825 SLC43A3Q8NBI5 491 aa11.87□□□□□ -0.51
LSP1P1-201ENST00000599825 MORC4Q8TE76 937 aa11.87□□□□□ -0.51
LSP1P1-201ENST00000599825 SCFD2Q8WU76 684 aa11.87□□□□□ -0.51
LSP1P1-201ENST00000599825 AFG1LQ8WV93 481 aa11.87□□□□□ -0.51
LSP1P1-201ENST00000599825 CERS4Q9HA82 394 aa11.87□□□□□ -0.51
LSP1P1-201ENST00000599825 ZSWIM5Q9P217 1185 aa11.87□□□□□ -0.51
LSP1P1-201ENST00000599825 YBX2Q9Y2T7 364 aaKnown RBP11.87□□□□□ -0.51
LSP1P1-201ENST00000599825 GBF1Q92538 1859 aa11.87□□□□□ -0.51
LSP1P1-201ENST00000599825 GSPT1P15170 499 aaKnown RBP11.86□□□□□ -0.51
LSP1P1-201ENST00000599825 TTLL4Q14679 1199 aa11.86□□□□□ -0.51
LSP1P1-201ENST00000599825 ASPRV1Q53RT3 343 aa11.86□□□□□ -0.51
LSP1P1-201ENST00000599825 ARHGEF16Q5VV41 709 aa11.86□□□□□ -0.51
LSP1P1-201ENST00000599825 CYB5R4Q7L1T6 521 aa11.86□□□□□ -0.51
LSP1P1-201ENST00000599825 DGKHQ86XP1 1220 aa11.86□□□□□ -0.51
LSP1P1-201ENST00000599825 SYTL5Q8TDW5 730 aaPredicted RBP11.86□□□□□ -0.51
LSP1P1-201ENST00000599825 HERVK_113Q902F9 699 aa11.86□□□□□ -0.51
LSP1P1-201ENST00000599825 RMDN3Q96TC7 470 aa11.86□□□□□ -0.51
LSP1P1-201ENST00000599825 ALG1Q9BT22 464 aa11.86□□□□□ -0.51
LSP1P1-201ENST00000599825 DSCC1Q9BVC3 393 aa11.86□□□□□ -0.51
LSP1P1-201ENST00000599825 KRT23Q9C075 422 aa11.86□□□□□ -0.51
LSP1P1-201ENST00000599825 FTOQ9C0B1 505 aaKnown RBP eCLIP11.86□□□□□ -0.51
LSP1P1-201ENST00000599825 OSBPL3Q9H4L5 887 aa11.86□□□□□ -0.51
LSP1P1-201ENST00000599825 JMJD4Q9H9V9 463 aa11.86□□□□□ -0.51
LSP1P1-201ENST00000599825 Q9Y3F1 56 aa11.86□□□□□ -0.51
LSP1P1-201ENST00000599825 SLC4A7Q9Y6M7 1214 aa11.86□□□□□ -0.51
LSP1P1-201ENST00000599825 TMEM265A0A087WTH1 108 aa11.85□□□□□ -0.51
LSP1P1-201ENST00000599825 B4DLN1 442 aa11.85□□□□□ -0.51
LSP1P1-201ENST00000599825 ZNF286BP0CG31 522 aa11.85□□□□□ -0.51
LSP1P1-201ENST00000599825 HOXA13P31271 388 aaPredicted RBP11.85□□□□□ -0.51
LSP1P1-201ENST00000599825 MRPL12P52815 198 aaKnown RBP11.85□□□□□ -0.51
LSP1P1-201ENST00000599825 NKX3-2P78367 333 aa11.85□□□□□ -0.51
LSP1P1-201ENST00000599825 RAB30Q15771 203 aa11.85□□□□□ -0.51
LSP1P1-201ENST00000599825 CCDC178Q5BJE1 867 aa11.85□□□□□ -0.51
LSP1P1-201ENST00000599825 PPP2R2DQ66LE6 453 aa11.85□□□□□ -0.51
LSP1P1-201ENST00000599825 DNERQ8NFT8 737 aa11.85□□□□□ -0.51
LSP1P1-201ENST00000599825 SLC28A3Q9HAS3 691 aa11.85□□□□□ -0.51
LSP1P1-201ENST00000599825 CTNNA3Q9UI47 895 aa11.85□□□□□ -0.51
LSP1P1-201ENST00000599825 MRVI1Q9Y6F6 885 aa11.85□□□□□ -0.51
LSP1P1-201ENST00000599825 SCN5AQ14524 2016 aa11.85□□□□□ -0.51
LSP1P1-201ENST00000599825 MYH6P13533 1939 aa11.84□□□□□ -0.51
LSP1P1-201ENST00000599825 RBM47A0AV96 593 aaKnown RBP11.84□□□□□ -0.51
LSP1P1-201ENST00000599825 GH1P01241 217 aa11.84□□□□□ -0.51
LSP1P1-201ENST00000599825 MMP3P08254 477 aa11.84□□□□□ -0.51
LSP1P1-201ENST00000599825 SUPT20HL2P0C7V6 817 aa11.84□□□□□ -0.51
LSP1P1-201ENST00000599825 ATP2A2P16615 1042 aaKnown RBP11.84□□□□□ -0.51
LSP1P1-201ENST00000599825 EDNRBP24530 442 aa11.84□□□□□ -0.51
LSP1P1-201ENST00000599825 PTH1RQ03431 593 aa11.84□□□□□ -0.51
LSP1P1-201ENST00000599825 TRDNQ13061 729 aa11.84□□□□□ -0.51
LSP1P1-201ENST00000599825 AAMPQ13685 434 aa11.84□□□□□ -0.51
LSP1P1-201ENST00000599825 TTC22Q5TAA0 569 aa11.84□□□□□ -0.51
LSP1P1-201ENST00000599825 RASIP1Q5U651 963 aa11.84□□□□□ -0.51
LSP1P1-201ENST00000599825 RALYLQ86SE5 291 aaKnown RBP11.84□□□□□ -0.51
LSP1P1-201ENST00000599825 MCF2L2Q86YR7 1114 aa11.84□□□□□ -0.51
LSP1P1-201ENST00000599825 RETREG2Q8NC44 543 aa11.84□□□□□ -0.51
LSP1P1-201ENST00000599825 NSUN6Q8TEA1 469 aaKnown RBP11.84□□□□□ -0.51
LSP1P1-201ENST00000599825 CNNM2Q9H8M5 875 aa11.84□□□□□ -0.51
LSP1P1-201ENST00000599825 SENP2Q9HC62 589 aa11.84□□□□□ -0.51
LSP1P1-201ENST00000599825 PNMA2Q9UL42 364 aa11.84□□□□□ -0.51
LSP1P1-201ENST00000599825 MRPL11Q9Y3B7 192 aaKnown RBP11.84□□□□□ -0.51
LSP1P1-201ENST00000599825 TAF6LQ9Y6J9 622 aa11.84□□□□□ -0.51
LSP1P1-201ENST00000599825 KLRF2D3W0D1 207 aa11.83□□□□□ -0.52
LSP1P1-201ENST00000599825 RFXAPO00287 272 aa11.83□□□□□ -0.52
LSP1P1-201ENST00000599825 IFIT3O14879 490 aaKnown RBP11.83□□□□□ -0.52
LSP1P1-201ENST00000599825 NKRFO15226 690 aaKnown RBP eCLIP11.83□□□□□ -0.52
LSP1P1-201ENST00000599825 ARHGAP1Q07960 439 aa11.83□□□□□ -0.52
LSP1P1-201ENST00000599825 ADGRE1Q14246 886 aa11.83□□□□□ -0.52
LSP1P1-201ENST00000599825 SKIV2LQ15477 1246 aaKnown RBP11.83□□□□□ -0.52
LSP1P1-201ENST00000599825 STXBP2Q15833 593 aa11.83□□□□□ -0.52
LSP1P1-201ENST00000599825 PTGISQ16647 500 aa11.83□□□□□ -0.52
LSP1P1-201ENST00000599825 TMCO2Q7Z6W1 182 aaPredicted RBP11.83□□□□□ -0.52
LSP1P1-201ENST00000599825 FCHSD1Q86WN1 690 aa11.83□□□□□ -0.52
LSP1P1-201ENST00000599825 RPUSD2Q8IZ73 545 aaKnown RBP11.83□□□□□ -0.52
LSP1P1-201ENST00000599825 AMNQ9BXJ7 453 aa11.83□□□□□ -0.52
LSP1P1-201ENST00000599825 PXMP2Q9NR77 195 aa11.83□□□□□ -0.52
LSP1P1-201ENST00000599825 ERICH2A1L162 156 aa11.82□□□□□ -0.52
LSP1P1-201ENST00000599825 A6NJR5 290 aa11.82□□□□□ -0.52
LSP1P1-201ENST00000599825 PPP1R11O60927 126 aaPredicted RBP11.82□□□□□ -0.52
LSP1P1-201ENST00000599825 CA3P07451 260 aa11.82□□□□□ -0.52
LSP1P1-201ENST00000599825 ACTN1P12814 892 aa11.82□□□□□ -0.52
LSP1P1-201ENST00000599825 GDF6Q6KF10 455 aaPredicted RBP11.82□□□□□ -0.52
LSP1P1-201ENST00000599825 TICAM2Q86XR7 235 aa11.82□□□□□ -0.52
LSP1P1-201ENST00000599825 RAB11FIP4Q86YS3 637 aa11.82□□□□□ -0.52
LSP1P1-201ENST00000599825 IL31RAQ8NI17 732 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms