RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 GJA9P57773 515 aa32.53■■■□□ 2.8
SSBP4-206ENST00000599699 LRRC26Q2I0M4 334 aa32.53■■■□□ 2.8
SSBP4-206ENST00000599699 WDR11Q9BZH6 1224 aa32.53■■■□□ 2.8
SSBP4-206ENST00000599699 PXMP2Q9NR77 195 aa32.53■■■□□ 2.8
SSBP4-206ENST00000599699 PHF24Q9UPV7 400 aa32.53■■■□□ 2.8
SSBP4-206ENST00000599699 MYADML2A6NDP7 307 aa32.52■■■□□ 2.8
SSBP4-206ENST00000599699 CDC27P30260 824 aa32.52■■■□□ 2.8
SSBP4-206ENST00000599699 PPP2R5BQ15173 497 aa32.52■■■□□ 2.8
SSBP4-206ENST00000599699 STXBP2Q15833 593 aa32.52■■■□□ 2.8
SSBP4-206ENST00000599699 HEATR3Q7Z4Q2 680 aa32.52■■■□□ 2.8
SSBP4-206ENST00000599699 TLK2Q86UE8 772 aa32.52■■■□□ 2.8
SSBP4-206ENST00000599699 CUL5Q93034 780 aa32.52■■■□□ 2.8
SSBP4-206ENST00000599699 TSEN34Q9BSV6 310 aaKnown RBP32.52■■■□□ 2.8
SSBP4-206ENST00000599699 AGXT2Q9BYV1 514 aa32.52■■■□□ 2.8
SSBP4-206ENST00000599699 UPF3AQ9H1J1 476 aaKnown RBP32.52■■■□□ 2.8
SSBP4-206ENST00000599699 GNEQ9Y223 722 aaKnown RBP32.52■■■□□ 2.8
SSBP4-206ENST00000599699 CNTNAP5Q8WYK1 1306 aa32.51■■■□□ 2.8
SSBP4-206ENST00000599699 LRRC37A2A6NM11 1700 aa32.51■■■□□ 2.8
SSBP4-206ENST00000599699 DYNC1LI2O43237 492 aaPredicted RBP32.51■■■□□ 2.79
SSBP4-206ENST00000599699 IRX5P78411 483 aaPredicted RBP32.51■■■□□ 2.79
SSBP4-206ENST00000599699 KCNA10Q16322 511 aa32.51■■■□□ 2.79
SSBP4-206ENST00000599699 GNASQ5JWF2 1037 aa32.51■■■□□ 2.79
SSBP4-206ENST00000599699 KLHDC9Q8NEP7 349 aa32.51■■■□□ 2.79
SSBP4-206ENST00000599699 FAM217BQ9NTX9 383 aaPredicted RBP32.51■■■□□ 2.79
SSBP4-206ENST00000599699 ADD1P35611 737 aaKnown RBP32.5■■■□□ 2.79
SSBP4-206ENST00000599699 TMEM63BQ5T3F8 832 aa32.5■■■□□ 2.79
SSBP4-206ENST00000599699 PCSK9Q8NBP7 692 aaKnown RBP32.5■■■□□ 2.79
SSBP4-206ENST00000599699 SCFD2Q8WU76 684 aa32.5■■■□□ 2.79
SSBP4-206ENST00000599699 PDRG1Q9NUG6 133 aa32.5■■■□□ 2.79
SSBP4-206ENST00000599699 V9GY48 417 aaPredicted RBP32.5■■■□□ 2.79
SSBP4-206ENST00000599699 NR3C2P08235 984 aa32.49■■■□□ 2.79
SSBP4-206ENST00000599699 PTGS1P23219 599 aa32.49■■■□□ 2.79
SSBP4-206ENST00000599699 CST5P28325 142 aaPredicted RBP32.49■■■□□ 2.79
SSBP4-206ENST00000599699 ACLYP53396 1101 aa32.49■■■□□ 2.79
SSBP4-206ENST00000599699 DUSP28Q4G0W2 176 aa32.49■■■□□ 2.79
SSBP4-206ENST00000599699 SLC39A5Q6ZMH5 540 aa32.49■■■□□ 2.79
SSBP4-206ENST00000599699 SMARCC2Q8TAQ2 1214 aa32.49■■■□□ 2.79
SSBP4-206ENST00000599699 GPKOWQ92917 476 aaPredicted RBP eCLIP32.49■■■□□ 2.79
SSBP4-206ENST00000599699 A0A1W2PQ45 241 aaPredicted RBP32.48■■■□□ 2.79
SSBP4-206ENST00000599699 A0A1W2PQY0 241 aa32.48■■■□□ 2.79
SSBP4-206ENST00000599699 RBM47A0AV96 593 aaKnown RBP32.48■■■□□ 2.79
SSBP4-206ENST00000599699 MOXD2PA6NHM9 499 aa32.48■■■□□ 2.79
SSBP4-206ENST00000599699 MYCLP12524 364 aaPredicted RBP32.48■■■□□ 2.79
SSBP4-206ENST00000599699 ANAPC15P60006 121 aa32.48■■■□□ 2.79
SSBP4-206ENST00000599699 BEX3Q00994 111 aa32.48■■■□□ 2.79
SSBP4-206ENST00000599699 FUT2Q10981 343 aa32.48■■■□□ 2.79
SSBP4-206ENST00000599699 TOB2Q14106 344 aaPredicted RBP32.48■■■□□ 2.79
SSBP4-206ENST00000599699 SEPT14Q6ZU15 432 aa32.48■■■□□ 2.79
SSBP4-206ENST00000599699 PSTPIP2Q9H939 334 aa32.48■■■□□ 2.79
SSBP4-206ENST00000599699 SEC24BO95487 1268 aa32.47■■■□□ 2.79
SSBP4-206ENST00000599699 FSCN1Q16658 493 aaKnown RBP32.47■■■□□ 2.79
SSBP4-206ENST00000599699 PDCD2LQ9BRP1 358 aa32.47■■■□□ 2.79
SSBP4-206ENST00000599699 ATP11BQ9Y2G3 1177 aa32.47■■■□□ 2.79
SSBP4-206ENST00000599699 Q9Y3F1 56 aa32.47■■■□□ 2.79
SSBP4-206ENST00000599699 EIF3JO75822 258 aaKnown RBP32.46■■■□□ 2.79
SSBP4-206ENST00000599699 TXNP10599 105 aaKnown RBP32.46■■■□□ 2.79
SSBP4-206ENST00000599699 RTP1P59025 263 aa32.46■■■□□ 2.79
SSBP4-206ENST00000599699 TTLL4Q14679 1199 aa32.46■■■□□ 2.79
SSBP4-206ENST00000599699 CCSAPQ6IQ19 270 aaPredicted RBP32.46■■■□□ 2.79
SSBP4-206ENST00000599699 USP17L6PQ6QN14 398 aa32.46■■■□□ 2.79
SSBP4-206ENST00000599699 VTI1AQ96AJ9 217 aa32.46■■■□□ 2.79
SSBP4-206ENST00000599699 CEP290O15078 2479 aa32.45■■■□□ 2.79
SSBP4-206ENST00000599699 ASGR1P07306 291 aa32.45■■■□□ 2.79
SSBP4-206ENST00000599699 PDIA3P30101 505 aaKnown RBP32.45■■■□□ 2.79
SSBP4-206ENST00000599699 PGM5Q15124 567 aa32.45■■■□□ 2.79
SSBP4-206ENST00000599699 WWC2Q6AWC2 1192 aa32.45■■■□□ 2.79
SSBP4-206ENST00000599699 OR6J1Q8NGC5 347 aa32.45■■■□□ 2.79
SSBP4-206ENST00000599699 LARP6Q9BRS8 491 aaKnown RBP32.45■■■□□ 2.79
SSBP4-206ENST00000599699 STARD7Q9NQZ5 370 aa32.45■■■□□ 2.79
SSBP4-206ENST00000599699 ZMYND8Q9ULU4 1186 aaPredicted RBP32.45■■■□□ 2.79
SSBP4-206ENST00000599699 NKRFO15226 690 aaKnown RBP eCLIP32.44■■■□□ 2.78
SSBP4-206ENST00000599699 CTAGE5O15320 804 aa32.44■■■□□ 2.78
SSBP4-206ENST00000599699 ZEB2O60315 1214 aa32.44■■■□□ 2.78
SSBP4-206ENST00000599699 CCND2P30279 289 aa32.44■■■□□ 2.78
SSBP4-206ENST00000599699 NAPAP54920 295 aa32.44■■■□□ 2.78
SSBP4-206ENST00000599699 EVCP57679 992 aa32.44■■■□□ 2.78
SSBP4-206ENST00000599699 CCT2P78371 535 aaKnown RBP32.44■■■□□ 2.78
SSBP4-206ENST00000599699 GLT1D1Q96MS3 346 aa32.44■■■□□ 2.78
SSBP4-206ENST00000599699 ALPK3Q96L96 1907 aa32.43■■■□□ 2.78
SSBP4-206ENST00000599699 NKX3-2P78367 333 aa32.43■■■□□ 2.78
SSBP4-206ENST00000599699 IL31RAQ8NI17 732 aa32.43■■■□□ 2.78
SSBP4-206ENST00000599699 NID2Q14112 1375 aa32.43■■■□□ 2.78
SSBP4-206ENST00000599699 PIK3CDO00329 1044 aa32.42■■■□□ 2.78
SSBP4-206ENST00000599699 MEIS2O14770 477 aa32.42■■■□□ 2.78
SSBP4-206ENST00000599699 SYN1P17600 705 aa32.42■■■□□ 2.78
SSBP4-206ENST00000599699 AKAP17AQ02040 695 aaKnown RBP32.42■■■□□ 2.78
SSBP4-206ENST00000599699 TRIM60Q495X7 471 aa32.42■■■□□ 2.78
SSBP4-206ENST00000599699 VSIG10LQ86VR7 867 aa32.42■■■□□ 2.78
SSBP4-206ENST00000599699 COPS5Q92905 334 aa32.42■■■□□ 2.78
SSBP4-206ENST00000599699 NCOA5Q9HCD5 579 aaKnown RBP32.42■■■□□ 2.78
SSBP4-206ENST00000599699 ARIH2O95376 493 aa32.41■■■□□ 2.78
SSBP4-206ENST00000599699 MRVI1Q9Y6F6 885 aa32.41■■■□□ 2.78
SSBP4-206ENST00000599699 DNAH12Q6ZR08 3092 aa32.41■■■□□ 2.78
SSBP4-206ENST00000599699 hCG_1984214I3L0E3 225 aa32.4■■■□□ 2.78
SSBP4-206ENST00000599699 CPT1AP50416 773 aa32.4■■■□□ 2.78
SSBP4-206ENST00000599699 STK3Q13188 491 aa32.4■■■□□ 2.78
SSBP4-206ENST00000599699 SNX17Q15036 470 aa32.4■■■□□ 2.78
SSBP4-206ENST00000599699 UBE2SQ16763 222 aa32.4■■■□□ 2.78
SSBP4-206ENST00000599699 LY6KQ17RY6 165 aa32.4■■■□□ 2.78
SSBP4-206ENST00000599699 BRDTQ58F21 947 aaPredicted RBP32.4■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms