RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 KCNQ1P51787 676 aa22.57■■□□□ 1.2
IRF3-222ENST00000599144 TMCO2Q7Z6W1 182 aaPredicted RBP22.57■■□□□ 1.2
IRF3-222ENST00000599144 SCFD2Q8WU76 684 aa22.57■■□□□ 1.2
IRF3-222ENST00000599144 GBF1Q92538 1859 aa22.57■■□□□ 1.2
IRF3-222ENST00000599144 TRIM6-TRIM34B2RNG4 842 aa22.56■■□□□ 1.2
IRF3-222ENST00000599144 SNHG28P0DPA3 235 aa22.56■■□□□ 1.2
IRF3-222ENST00000599144 RRP1P56182 461 aaKnown RBP22.56■■□□□ 1.2
IRF3-222ENST00000599144 MFSD6Q6ZSS7 791 aa22.56■■□□□ 1.2
IRF3-222ENST00000599144 IL27Q8NEV9 243 aa22.56■■□□□ 1.2
IRF3-222ENST00000599144 COL20A1Q9P218 1284 aa22.56■■□□□ 1.2
IRF3-222ENST00000599144 CCDC171Q6TFL3 1326 aa22.56■■□□□ 1.2
IRF3-222ENST00000599144 A6NJR5 290 aa22.55■■□□□ 1.2
IRF3-222ENST00000599144 PFKMP08237 780 aa22.55■■□□□ 1.2
IRF3-222ENST00000599144 LY6KQ17RY6 165 aa22.55■■□□□ 1.2
IRF3-222ENST00000599144 SEPT14Q6ZU15 432 aa22.55■■□□□ 1.2
IRF3-222ENST00000599144 CHST3Q7LGC8 479 aa22.55■■□□□ 1.2
IRF3-222ENST00000599144 RETREG2Q8NC44 543 aa22.55■■□□□ 1.2
IRF3-222ENST00000599144 AFG1LQ8WV93 481 aa22.55■■□□□ 1.2
IRF3-222ENST00000599144 ARNTL2Q8WYA1 636 aa22.55■■□□□ 1.2
IRF3-222ENST00000599144 RILPL2Q969X0 211 aa22.55■■□□□ 1.2
IRF3-222ENST00000599144 TAAR1Q96RJ0 339 aa22.55■■□□□ 1.2
IRF3-222ENST00000599144 LNPKQ9C0E8 428 aa22.55■■□□□ 1.2
IRF3-222ENST00000599144 NOD1Q9Y239 953 aa22.55■■□□□ 1.2
IRF3-222ENST00000599144 MTCH2Q9Y6C9 303 aa22.55■■□□□ 1.2
IRF3-222ENST00000599144 WDR19Q8NEZ3 1342 aa22.55■■□□□ 1.2
IRF3-222ENST00000599144 LOC102724159A0A0B4J2E5 919 aa22.54■■□□□ 1.2
IRF3-222ENST00000599144 PWP2Q15269 919 aaKnown RBP22.54■■□□□ 1.2
IRF3-222ENST00000599144 BRDTQ58F21 947 aaPredicted RBP22.54■■□□□ 1.2
IRF3-222ENST00000599144 NFRKBQ6P4R8 1299 aa22.54■■□□□ 1.2
IRF3-222ENST00000599144 RAD50Q92878 1312 aa22.54■■□□□ 1.2
IRF3-222ENST00000599144 MUC3AQ02505 3323 aa22.54■■□□□ 1.2
IRF3-222ENST00000599144 NKRFO15226 690 aaKnown RBP eCLIP22.53■■□□□ 1.2
IRF3-222ENST00000599144 ACTN1P12814 892 aa22.53■■□□□ 1.2
IRF3-222ENST00000599144 BMP1P13497 986 aa22.53■■□□□ 1.2
IRF3-222ENST00000599144 TAP1Q03518 808 aa22.53■■□□□ 1.2
IRF3-222ENST00000599144 CDC37Q16543 378 aaPredicted RBP22.53■■□□□ 1.2
IRF3-222ENST00000599144 HERC6Q8IVU3 1022 aa22.53■■□□□ 1.2
IRF3-222ENST00000599144 DNERQ8NFT8 737 aa22.53■■□□□ 1.2
IRF3-222ENST00000599144 CTAGE1Q96RT6 745 aa22.53■■□□□ 1.2
IRF3-222ENST00000599144 SCN5AQ14524 2016 aa22.52■■□□□ 1.2
IRF3-222ENST00000599144 GPNMBQ14956 572 aa22.52■■□□□ 1.2
IRF3-222ENST00000599144 PTGISQ16647 500 aa22.52■■□□□ 1.2
IRF3-222ENST00000599144 TCTN1Q2MV58 587 aa22.52■■□□□ 1.2
IRF3-222ENST00000599144 GDF6Q6KF10 455 aaPredicted RBP22.52■■□□□ 1.2
IRF3-222ENST00000599144 B4GALNT3Q6L9W6 998 aa22.52■■□□□ 1.2
IRF3-222ENST00000599144 CCDC62Q6P9F0 684 aa22.52■■□□□ 1.2
IRF3-222ENST00000599144 SYTL5Q8TDW5 730 aaPredicted RBP22.52■■□□□ 1.2
IRF3-222ENST00000599144 TTC14Q96N46 770 aa22.52■■□□□ 1.2
IRF3-222ENST00000599144 SLC9A7Q96T83 725 aa22.52■■□□□ 1.2
IRF3-222ENST00000599144 CHD7Q9P2D1 2997 aa22.52■■□□□ 1.2
IRF3-222ENST00000599144 ZMYM6O95789 1325 aa22.52■■□□□ 1.2
IRF3-222ENST00000599144 LCHNA4D1U4 455 aa22.51■■□□□ 1.19
IRF3-222ENST00000599144 PITPNM1O00562 1244 aa22.51■■□□□ 1.19
IRF3-222ENST00000599144 SORBS3O60504 671 aa22.51■■□□□ 1.19
IRF3-222ENST00000599144 KDM4AO75164 1064 aa22.51■■□□□ 1.19
IRF3-222ENST00000599144 MMP3P08254 477 aa22.51■■□□□ 1.19
IRF3-222ENST00000599144 RFC2P35250 354 aa22.51■■□□□ 1.19
IRF3-222ENST00000599144 ARHGAP1Q07960 439 aa22.51■■□□□ 1.19
IRF3-222ENST00000599144 DHX38Q92620 1227 aaKnown RBP22.51■■□□□ 1.19
IRF3-222ENST00000599144 KAT2BQ92831 832 aa22.51■■□□□ 1.19
IRF3-222ENST00000599144 MPHOSPH6Q99547 160 aaKnown RBP22.51■■□□□ 1.19
IRF3-222ENST00000599144 TSPYL2Q9H2G4 693 aaPredicted RBP22.51■■□□□ 1.19
IRF3-222ENST00000599144 VAT1LQ9HCJ6 419 aa22.51■■□□□ 1.19
IRF3-222ENST00000599144 KPNA6O60684 536 aa22.5■■□□□ 1.19
IRF3-222ENST00000599144 BFSP2Q13515 415 aa22.5■■□□□ 1.19
IRF3-222ENST00000599144 ADGRF4Q8IZF3 695 aa22.5■■□□□ 1.19
IRF3-222ENST00000599144 PNMA1Q8ND90 353 aa22.5■■□□□ 1.19
IRF3-222ENST00000599144 ESR2Q92731 530 aa22.5■■□□□ 1.19
IRF3-222ENST00000599144 B4E1Z4 1266 aa22.49■■□□□ 1.19
IRF3-222ENST00000599144 GTPBP6O43824 516 aaPredicted RBP22.49■■□□□ 1.19
IRF3-222ENST00000599144 EIF2AK2P19525 551 aaKnown RBP22.49■■□□□ 1.19
IRF3-222ENST00000599144 SDSP20132 328 aa22.49■■□□□ 1.19
IRF3-222ENST00000599144 DEFB103AP81534 67 aa22.49■■□□□ 1.19
IRF3-222ENST00000599144 PTPN11Q06124 597 aaPredicted RBP22.49■■□□□ 1.19
IRF3-222ENST00000599144 GRB10Q13322 594 aa22.49■■□□□ 1.19
IRF3-222ENST00000599144 QRICH1Q2TAL8 776 aa22.49■■□□□ 1.19
IRF3-222ENST00000599144 GPATCH4Q5T3I0 446 aaKnown RBP22.49■■□□□ 1.19
IRF3-222ENST00000599144 ALG1Q9BT22 464 aa22.49■■□□□ 1.19
IRF3-222ENST00000599144 PNMA2Q9UL42 364 aa22.49■■□□□ 1.19
IRF3-222ENST00000599144 MYO9BQ13459 2157 aa22.48■■□□□ 1.19
IRF3-222ENST00000599144 DHX16O60231 1041 aaKnown RBP22.48■■□□□ 1.19
IRF3-222ENST00000599144 GH1P01241 217 aa22.48■■□□□ 1.19
IRF3-222ENST00000599144 HDAC1Q13547 482 aaPredicted RBP22.48■■□□□ 1.19
IRF3-222ENST00000599144 PHOSPHO2Q8TCD6 241 aa22.48■■□□□ 1.19
IRF3-222ENST00000599144 RNF41Q9H4P4 317 aaPredicted RBP22.48■■□□□ 1.19
IRF3-222ENST00000599144 KAT14Q9H8E8 782 aa22.48■■□□□ 1.19
IRF3-222ENST00000599144 SCN10AQ9Y5Y9 1956 aa22.47■■□□□ 1.19
IRF3-222ENST00000599144 ZNF213O14771 459 aa22.47■■□□□ 1.19
IRF3-222ENST00000599144 TLL1O43897 1013 aa22.47■■□□□ 1.19
IRF3-222ENST00000599144 WDR5P61964 334 aaKnown RBP22.47■■□□□ 1.19
IRF3-222ENST00000599144 CWC27Q6UX04 472 aaKnown RBP22.47■■□□□ 1.19
IRF3-222ENST00000599144 DGKHQ86XP1 1220 aa22.47■■□□□ 1.19
IRF3-222ENST00000599144 RGS22Q8NE09 1264 aa22.47■■□□□ 1.19
IRF3-222ENST00000599144 WNT8BQ93098 351 aa22.47■■□□□ 1.19
IRF3-222ENST00000599144 ZFP91Q96JP5 570 aaPredicted RBP22.47■■□□□ 1.19
IRF3-222ENST00000599144 RMDN3Q96TC7 470 aa22.47■■□□□ 1.19
IRF3-222ENST00000599144 HDAC6Q9UBN7 1215 aa22.47■■□□□ 1.19
IRF3-222ENST00000599144 MTUS1Q9ULD2 1270 aa22.47■■□□□ 1.19
IRF3-222ENST00000599144 ABCB11O95342 1321 aa22.47■■□□□ 1.19
IRF3-222ENST00000599144 B4DLN1 442 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms