RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 MSL3Q8N5Y2 521 aaKnown RBP5.42□□□□□ -1.54
HERC3-213ENST00000598772 CCDC155Q8N6L0 562 aa5.42□□□□□ -1.54
HERC3-213ENST00000598772 SUMF1Q8NBK3 374 aa5.42□□□□□ -1.54
HERC3-213ENST00000598772 LPIN2Q92539 896 aa5.42□□□□□ -1.54
HERC3-213ENST00000598772 CHMP4AQ9BY43 222 aa5.42□□□□□ -1.54
HERC3-213ENST00000598772 DHX36Q9H2U1 1008 aaKnown RBP5.42□□□□□ -1.54
HERC3-213ENST00000598772 TLE6Q9H808 572 aa5.42□□□□□ -1.54
HERC3-213ENST00000598772 DNAJC18Q9H819 358 aa5.42□□□□□ -1.54
HERC3-213ENST00000598772 ADAMTS8Q9UP79 889 aa5.42□□□□□ -1.54
HERC3-213ENST00000598772 NR2E1Q9Y466 385 aa5.42□□□□□ -1.54
HERC3-213ENST00000598772 CTDP1Q9Y5B0 961 aaPredicted RBP5.42□□□□□ -1.54
HERC3-213ENST00000598772 RALGAPA2Q2PPJ7 1873 aa5.42□□□□□ -1.54
HERC3-213ENST00000598772 ROBO3Q96MS0 1386 aa5.42□□□□□ -1.54
HERC3-213ENST00000598772 CDK5RAP2Q96SN8 1893 aa5.41□□□□□ -1.54
HERC3-213ENST00000598772 F6X3S4 739 aa5.41□□□□□ -1.54
HERC3-213ENST00000598772 EFCAB14O75071 495 aa5.41□□□□□ -1.54
HERC3-213ENST00000598772 PPFIA3O75145 1194 aa5.41□□□□□ -1.54
HERC3-213ENST00000598772 DCNP07585 359 aaKnown RBP5.41□□□□□ -1.54
HERC3-213ENST00000598772 SELPP16109 830 aa5.41□□□□□ -1.54
HERC3-213ENST00000598772 SPEM2Q0P670 501 aa5.41□□□□□ -1.54
HERC3-213ENST00000598772 SEPT2Q15019 361 aa5.41□□□□□ -1.54
HERC3-213ENST00000598772 LPAL2Q16609 132 aa5.41□□□□□ -1.54
HERC3-213ENST00000598772 PTGISQ16647 500 aa5.41□□□□□ -1.54
HERC3-213ENST00000598772 TMEM63BQ5T3F8 832 aa5.41□□□□□ -1.54
HERC3-213ENST00000598772 IL31Q6EBC2 164 aa5.41□□□□□ -1.54
HERC3-213ENST00000598772 TBC1D9Q6ZT07 1266 aa5.41□□□□□ -1.54
HERC3-213ENST00000598772 LRRC8DQ7L1W4 858 aa5.41□□□□□ -1.54
HERC3-213ENST00000598772 ADGRD2Q7Z7M1 963 aa5.41□□□□□ -1.54
HERC3-213ENST00000598772 RIOX2Q8IUF8 465 aa5.41□□□□□ -1.54
HERC3-213ENST00000598772 CCDC144CPQ8IYA2 1237 aa5.41□□□□□ -1.54
HERC3-213ENST00000598772 FIBCD1Q8N539 461 aa5.41□□□□□ -1.54
HERC3-213ENST00000598772 EFHBQ8N7U6 833 aa5.41□□□□□ -1.54
HERC3-213ENST00000598772 ATRIPQ8WXE1 791 aa5.41□□□□□ -1.54
HERC3-213ENST00000598772 C11orf84Q9BUA3 381 aaPredicted RBP5.41□□□□□ -1.54
HERC3-213ENST00000598772 ERVK-5Q9HDB9 667 aa5.41□□□□□ -1.54
HERC3-213ENST00000598772 PDGFCQ9NRA1 345 aa5.41□□□□□ -1.54
HERC3-213ENST00000598772 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.41□□□□□ -1.54
HERC3-213ENST00000598772 DDX49Q9Y6V7 483 aaKnown RBP5.41□□□□□ -1.54
HERC3-213ENST00000598772 TRIP12Q14669 1992 aaPredicted RBP5.4□□□□□ -1.54
HERC3-213ENST00000598772 PIEZO2Q9H5I5 2752 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 HECTD1Q9ULT8 2610 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 C2CD4DB7Z1M9 353 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 GRM8O00222 908 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 SLC30A4O14863 429 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 SEMA3EO15041 775 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 NBNO60934 754 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 NPR3P17342 541 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 ATF7P17544 494 aaPredicted RBP5.4□□□□□ -1.54
HERC3-213ENST00000598772 SPINK2P20155 84 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 FGFR2P21802 821 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 PMLP29590 882 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 BMPR1AP36894 532 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 FLIIQ13045 1269 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 GPNMBQ14956 572 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 ATP2B3Q16720 1220 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 LRRFIP1Q32MZ4 808 aaKnown RBP5.4□□□□□ -1.54
HERC3-213ENST00000598772 KIAA1755Q5JYT7 1200 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 LARP1BQ659C4 914 aaKnown RBP5.4□□□□□ -1.54
HERC3-213ENST00000598772 LLGL2Q6P1M3 1020 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 SLC4A10Q6U841 1118 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 MAMDC4Q6UXC1 1216 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 KIAA1211Q6ZU35 1233 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 CPXCR1Q8N123 301 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 ZNF710Q8N1W2 664 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 TSPYL6Q8N831 410 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 VGLL2Q8N8G2 317 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 AFAP1L1Q8TED9 768 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 IL17RAQ96F46 866 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 SUCLG2Q96I99 432 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 NEK1Q96PY6 1258 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 MTG1Q9BT17 334 aaPredicted RBP5.4□□□□□ -1.54
HERC3-213ENST00000598772 IFIH1Q9BYX4 1025 aaKnown RBP5.4□□□□□ -1.54
HERC3-213ENST00000598772 LMAN2LQ9H0V9 348 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 FBXO28Q9NVF7 368 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 POLR3EQ9NVU0 708 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 AATFQ9NY61 560 aaKnown RBP eCLIP5.4□□□□□ -1.54
HERC3-213ENST00000598772 GMEB2Q9UKD1 530 aa5.4□□□□□ -1.54
HERC3-213ENST00000598772 SALL1Q9NSC2 1324 aa5.4□□□□□ -1.55
HERC3-213ENST00000598772 PTPRSQ13332 1948 aa5.4□□□□□ -1.55
HERC3-213ENST00000598772 MYH13Q9UKX3 1938 aa5.4□□□□□ -1.55
HERC3-213ENST00000598772 ZNF236Q9UL36 1845 aa5.39□□□□□ -1.55
HERC3-213ENST00000598772 A0A1W2PRG0 241 aa5.39□□□□□ -1.55
HERC3-213ENST00000598772 BAG3O95817 575 aa5.39□□□□□ -1.55
HERC3-213ENST00000598772 RB1P06400 928 aa5.39□□□□□ -1.55
HERC3-213ENST00000598772 TECP42680 631 aa5.39□□□□□ -1.55
HERC3-213ENST00000598772 HTRA4P83105 476 aaPredicted RBP5.39□□□□□ -1.55
HERC3-213ENST00000598772 CNTN2Q02246 1040 aa5.39□□□□□ -1.55
HERC3-213ENST00000598772 SNRNP48Q6IEG0 339 aaKnown RBP5.39□□□□□ -1.55
HERC3-213ENST00000598772 C1orf210Q8IVY1 113 aa5.39□□□□□ -1.55
HERC3-213ENST00000598772 KDF1Q8NAX2 398 aaPredicted RBP5.39□□□□□ -1.55
HERC3-213ENST00000598772 DBF4BQ8NFT6 615 aa5.39□□□□□ -1.55
HERC3-213ENST00000598772 ADAM32Q8TC27 787 aa5.39□□□□□ -1.55
HERC3-213ENST00000598772 NETO1Q8TDF5 533 aa5.39□□□□□ -1.55
HERC3-213ENST00000598772 ZCCHC14Q8WYQ9 949 aaKnown RBP5.39□□□□□ -1.55
HERC3-213ENST00000598772 PARD6AQ9NPB6 346 aa5.39□□□□□ -1.55
HERC3-213ENST00000598772 LRP2BPQ9P2M1 347 aa5.39□□□□□ -1.55
HERC3-213ENST00000598772 CDH22Q9UJ99 828 aa5.39□□□□□ -1.55
HERC3-213ENST00000598772 SMG5Q9UPR3 1016 aaKnown RBP5.39□□□□□ -1.55
HERC3-213ENST00000598772 GNEQ9Y223 722 aaKnown RBP5.39□□□□□ -1.55
HERC3-213ENST00000598772 TEP1Q99973 2627 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms