RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 PPP2R5BQ15173 497 aa15.99■□□□□ 0.15
UPF1-205ENST00000598209 IWS1Q96ST2 819 aa15.99■□□□□ 0.15
UPF1-205ENST00000598209 UPF3AQ9H1J1 476 aaKnown RBP15.99■□□□□ 0.15
UPF1-205ENST00000598209 SPC25Q9HBM1 224 aa15.99■□□□□ 0.15
UPF1-205ENST00000598209 PXMP2Q9NR77 195 aa15.99■□□□□ 0.15
UPF1-205ENST00000598209 PDRG1Q9NUG6 133 aa15.99■□□□□ 0.15
UPF1-205ENST00000598209 GNEQ9Y223 722 aaKnown RBP15.99■□□□□ 0.15
UPF1-205ENST00000598209 RBM47A0AV96 593 aaKnown RBP15.98■□□□□ 0.15
UPF1-205ENST00000598209 MYADML2A6NDP7 307 aa15.98■□□□□ 0.15
UPF1-205ENST00000598209 EVI5O60447 810 aa15.98■□□□□ 0.15
UPF1-205ENST00000598209 C6orf222P0C671 652 aaPredicted RBP15.98■□□□□ 0.15
UPF1-205ENST00000598209 ADD1P35611 737 aaKnown RBP15.98■□□□□ 0.15
UPF1-205ENST00000598209 EVCP57679 992 aa15.98■□□□□ 0.15
UPF1-205ENST00000598209 GJA9P57773 515 aa15.98■□□□□ 0.15
UPF1-205ENST00000598209 C8orf34Q49A92 452 aa15.98■□□□□ 0.15
UPF1-205ENST00000598209 PRPF38BQ5VTL8 546 aaKnown RBP15.98■□□□□ 0.15
UPF1-205ENST00000598209 HEATR3Q7Z4Q2 680 aa15.98■□□□□ 0.15
UPF1-205ENST00000598209 TLK2Q86UE8 772 aa15.98■□□□□ 0.15
UPF1-205ENST00000598209 FCHSD1Q86WN1 690 aa15.98■□□□□ 0.15
UPF1-205ENST00000598209 KLHDC9Q8NEP7 349 aa15.98■□□□□ 0.15
UPF1-205ENST00000598209 MYH7BA7E2Y1 1941 aa15.98■□□□□ 0.15
UPF1-205ENST00000598209 NR3C2P08235 984 aa15.97■□□□□ 0.15
UPF1-205ENST00000598209 PTGS1P23219 599 aa15.97■□□□□ 0.15
UPF1-205ENST00000598209 CST5P28325 142 aaPredicted RBP15.97■□□□□ 0.15
UPF1-205ENST00000598209 PDIA3P30101 505 aaKnown RBP15.97■□□□□ 0.15
UPF1-205ENST00000598209 ATN1P54259 1190 aaPredicted RBP15.97■□□□□ 0.15
UPF1-205ENST00000598209 IRX5P78411 483 aaPredicted RBP15.97■□□□□ 0.15
UPF1-205ENST00000598209 STXBP2Q15833 593 aa15.97■□□□□ 0.15
UPF1-205ENST00000598209 LRRC26Q2I0M4 334 aa15.97■□□□□ 0.15
UPF1-205ENST00000598209 DUSP28Q4G0W2 176 aa15.97■□□□□ 0.15
UPF1-205ENST00000598209 TMEM63BQ5T3F8 832 aa15.97■□□□□ 0.15
UPF1-205ENST00000598209 SMARCC2Q8TAQ2 1214 aa15.97■□□□□ 0.15
UPF1-205ENST00000598209 GPKOWQ92917 476 aaPredicted RBP eCLIP15.97■□□□□ 0.15
UPF1-205ENST00000598209 CUL5Q93034 780 aa15.97■□□□□ 0.15
UPF1-205ENST00000598209 FERMT2Q96AC1 680 aa15.97■□□□□ 0.15
UPF1-205ENST00000598209 PDCD2LQ9BRP1 358 aa15.97■□□□□ 0.15
UPF1-205ENST00000598209 LARP6Q9BRS8 491 aaKnown RBP15.97■□□□□ 0.15
UPF1-205ENST00000598209 TSEN34Q9BSV6 310 aaKnown RBP15.97■□□□□ 0.15
UPF1-205ENST00000598209 WDR11Q9BZH6 1224 aa15.97■□□□□ 0.15
UPF1-205ENST00000598209 PHF24Q9UPV7 400 aa15.97■□□□□ 0.15
UPF1-205ENST00000598209 V9GY48 417 aaPredicted RBP15.97■□□□□ 0.15
UPF1-205ENST00000598209 DYNC1LI2O43237 492 aaPredicted RBP15.96■□□□□ 0.15
UPF1-205ENST00000598209 NKX3-2P78367 333 aa15.96■□□□□ 0.15
UPF1-205ENST00000598209 CCT2P78371 535 aaKnown RBP15.96■□□□□ 0.15
UPF1-205ENST00000598209 PGM5Q15124 567 aa15.96■□□□□ 0.15
UPF1-205ENST00000598209 KCNA10Q16322 511 aa15.96■□□□□ 0.15
UPF1-205ENST00000598209 GNASQ5JWF2 1037 aa15.96■□□□□ 0.15
UPF1-205ENST00000598209 WWC2Q6AWC2 1192 aa15.96■□□□□ 0.15
UPF1-205ENST00000598209 CCSAPQ6IQ19 270 aaPredicted RBP15.96■□□□□ 0.15
UPF1-205ENST00000598209 USP17L6PQ6QN14 398 aa15.96■□□□□ 0.15
UPF1-205ENST00000598209 C7orf61Q8IZ16 206 aa15.96■□□□□ 0.15
UPF1-205ENST00000598209 SCFD2Q8WU76 684 aa15.96■□□□□ 0.15
UPF1-205ENST00000598209 IL17RAQ96F46 866 aa15.96■□□□□ 0.15
UPF1-205ENST00000598209 AP5M1Q9H0R1 490 aa15.96■□□□□ 0.15
UPF1-205ENST00000598209 Q9Y3F1 56 aa15.96■□□□□ 0.15
UPF1-205ENST00000598209 NR2E3Q9Y5X4 410 aa15.96■□□□□ 0.15
UPF1-205ENST00000598209 A0A1W2PQ45 241 aaPredicted RBP15.95■□□□□ 0.14
UPF1-205ENST00000598209 A0A1W2PQY0 241 aa15.95■□□□□ 0.14
UPF1-205ENST00000598209 H0YGN5 161 aa15.95■□□□□ 0.14
UPF1-205ENST00000598209 PIK3CDO00329 1044 aa15.95■□□□□ 0.14
UPF1-205ENST00000598209 MEIS2O14770 477 aa15.95■□□□□ 0.14
UPF1-205ENST00000598209 CTAGE5O15320 804 aa15.95■□□□□ 0.14
UPF1-205ENST00000598209 MYCLP12524 364 aaPredicted RBP15.95■□□□□ 0.14
UPF1-205ENST00000598209 ACLYP53396 1101 aa15.95■□□□□ 0.14
UPF1-205ENST00000598209 BEX3Q00994 111 aa15.95■□□□□ 0.14
UPF1-205ENST00000598209 SLC39A5Q6ZMH5 540 aa15.95■□□□□ 0.14
UPF1-205ENST00000598209 SEPT14Q6ZU15 432 aa15.95■□□□□ 0.14
UPF1-205ENST00000598209 PCSK9Q8NBP7 692 aaKnown RBP15.95■□□□□ 0.14
UPF1-205ENST00000598209 IL31RAQ8NI17 732 aa15.95■□□□□ 0.14
UPF1-205ENST00000598209 ZNF274Q96GC6 653 aaPredicted RBP15.95■□□□□ 0.14
UPF1-205ENST00000598209 PSTPIP2Q9H939 334 aa15.95■□□□□ 0.14
UPF1-205ENST00000598209 NCOA5Q9HCD5 579 aaKnown RBP15.95■□□□□ 0.14
UPF1-205ENST00000598209 MOXD2PA6NHM9 499 aa15.94■□□□□ 0.14
UPF1-205ENST00000598209 hCG_1984214I3L0E3 225 aa15.94■□□□□ 0.14
UPF1-205ENST00000598209 NKRFO15226 690 aaKnown RBP eCLIP15.94■□□□□ 0.14
UPF1-205ENST00000598209 EIF3JO75822 258 aaKnown RBP15.94■□□□□ 0.14
UPF1-205ENST00000598209 ASGR1P07306 291 aa15.94■□□□□ 0.14
UPF1-205ENST00000598209 TXNP10599 105 aaKnown RBP15.94■□□□□ 0.14
UPF1-205ENST00000598209 CCND2P30279 289 aa15.94■□□□□ 0.14
UPF1-205ENST00000598209 NAPAP54920 295 aa15.94■□□□□ 0.14
UPF1-205ENST00000598209 RTP1P59025 263 aa15.94■□□□□ 0.14
UPF1-205ENST00000598209 TTLL4Q14679 1199 aa15.94■□□□□ 0.14
UPF1-205ENST00000598209 NTRK3Q16288 839 aa15.94■□□□□ 0.14
UPF1-205ENST00000598209 FSCN1Q16658 493 aaKnown RBP15.94■□□□□ 0.14
UPF1-205ENST00000598209 ZNF713Q8N859 430 aaPredicted RBP15.94■□□□□ 0.14
UPF1-205ENST00000598209 FRMPD4Q14CM0 1322 aa15.94■□□□□ 0.14
UPF1-205ENST00000598209 CEP290O15078 2479 aa15.93■□□□□ 0.14
UPF1-205ENST00000598209 STXBP3O00186 592 aa15.93■□□□□ 0.14
UPF1-205ENST00000598209 PRPF3O43395 683 aaKnown RBP15.93■□□□□ 0.14
UPF1-205ENST00000598209 ARIH2O95376 493 aa15.93■□□□□ 0.14
UPF1-205ENST00000598209 SCG2P13521 617 aa15.93■□□□□ 0.14
UPF1-205ENST00000598209 UBE2SQ16763 222 aa15.93■□□□□ 0.14
UPF1-205ENST00000598209 PFKFB3Q16875 520 aaPredicted RBP15.93■□□□□ 0.14
UPF1-205ENST00000598209 TYW1BQ6NUM6 668 aa15.93■□□□□ 0.14
UPF1-205ENST00000598209 PPP1R18Q6NYC8 613 aa15.93■□□□□ 0.14
UPF1-205ENST00000598209 CCDC62Q6P9F0 684 aa15.93■□□□□ 0.14
UPF1-205ENST00000598209 VSIG10LQ86VR7 867 aa15.93■□□□□ 0.14
UPF1-205ENST00000598209 OR6J1Q8NGC5 347 aa15.93■□□□□ 0.14
UPF1-205ENST00000598209 COPS5Q92905 334 aa15.93■□□□□ 0.14
UPF1-205ENST00000598209 PHKBQ93100 1093 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms