RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 TMEM63BQ5T3F8 832 aa17.28■□□□□ 0.36
SCN1B-204ENST00000596348 USP17L6PQ6QN14 398 aa17.28■□□□□ 0.36
SCN1B-204ENST00000596348 SAMD3Q8N6K7 520 aa17.28■□□□□ 0.36
SCN1B-204ENST00000596348 IL31RAQ8NI17 732 aa17.28■□□□□ 0.36
SCN1B-204ENST00000596348 C22orf23Q9BZE7 217 aa17.28■□□□□ 0.36
SCN1B-204ENST00000596348 VTA1Q9NP79 307 aa17.28■□□□□ 0.36
SCN1B-204ENST00000596348 XPNPEP3Q9NQH7 507 aa17.28■□□□□ 0.36
SCN1B-204ENST00000596348 PXMP2Q9NR77 195 aa17.28■□□□□ 0.36
SCN1B-204ENST00000596348 MAP3K20Q9NYL2 800 aaKnown RBP17.28■□□□□ 0.36
SCN1B-204ENST00000596348 KIAA1217Q5T5P2 1943 aa17.27■□□□□ 0.36
SCN1B-204ENST00000596348 SYNRGQ9UMZ2 1314 aa17.27■□□□□ 0.36
SCN1B-204ENST00000596348 STXBP3O00186 592 aa17.27■□□□□ 0.36
SCN1B-204ENST00000596348 MEIS2O14770 477 aa17.27■□□□□ 0.36
SCN1B-204ENST00000596348 IFNAR1P17181 557 aa17.27■□□□□ 0.36
SCN1B-204ENST00000596348 RBM25P49756 843 aaKnown RBP17.27■□□□□ 0.36
SCN1B-204ENST00000596348 IRX5P78411 483 aaPredicted RBP17.27■□□□□ 0.36
SCN1B-204ENST00000596348 LRRC41Q15345 812 aa17.27■□□□□ 0.36
SCN1B-204ENST00000596348 PKN1Q16512 942 aa17.27■□□□□ 0.36
SCN1B-204ENST00000596348 GJC2Q5T442 439 aaPredicted RBP17.27■□□□□ 0.36
SCN1B-204ENST00000596348 FCHSD1Q86WN1 690 aa17.27■□□□□ 0.36
SCN1B-204ENST00000596348 PDCD2LQ9BRP1 358 aa17.27■□□□□ 0.36
SCN1B-204ENST00000596348 PIK3CDO00329 1044 aa17.26■□□□□ 0.35
SCN1B-204ENST00000596348 ADAMTS4O75173 837 aa17.26■□□□□ 0.35
SCN1B-204ENST00000596348 DUSP11O75319 330 aaKnown RBP17.26■□□□□ 0.35
SCN1B-204ENST00000596348 LARGE1O95461 756 aa17.26■□□□□ 0.35
SCN1B-204ENST00000596348 COL6A1P12109 1028 aa17.26■□□□□ 0.35
SCN1B-204ENST00000596348 SMPD1P17405 629 aa17.26■□□□□ 0.35
SCN1B-204ENST00000596348 UBE2SQ16763 222 aa17.26■□□□□ 0.35
SCN1B-204ENST00000596348 PFKFB3Q16875 520 aaPredicted RBP17.26■□□□□ 0.35
SCN1B-204ENST00000596348 ARHGEF16Q5VV41 709 aa17.26■□□□□ 0.35
SCN1B-204ENST00000596348 NOL8Q76FK4 1167 aaKnown RBP17.26■□□□□ 0.35
SCN1B-204ENST00000596348 IWS1Q96ST2 819 aa17.26■□□□□ 0.35
SCN1B-204ENST00000596348 PSTPIP2Q9H939 334 aa17.26■□□□□ 0.35
SCN1B-204ENST00000596348 BARHL2Q9NY43 387 aa17.26■□□□□ 0.35
SCN1B-204ENST00000596348 FRMPD4Q14CM0 1322 aa17.25■□□□□ 0.35
SCN1B-204ENST00000596348 RBM47A0AV96 593 aaKnown RBP17.25■□□□□ 0.35
SCN1B-204ENST00000596348 MYADML2A6NDP7 307 aa17.25■□□□□ 0.35
SCN1B-204ENST00000596348 DNM1LO00429 736 aa17.25■□□□□ 0.35
SCN1B-204ENST00000596348 PRPF3O43395 683 aaKnown RBP17.25■□□□□ 0.35
SCN1B-204ENST00000596348 PFKFB2O60825 505 aa17.25■□□□□ 0.35
SCN1B-204ENST00000596348 NR3C2P08235 984 aa17.25■□□□□ 0.35
SCN1B-204ENST00000596348 SCG2P13521 617 aa17.25■□□□□ 0.35
SCN1B-204ENST00000596348 NAPAP54920 295 aa17.25■□□□□ 0.35
SCN1B-204ENST00000596348 TNFAIP2Q03169 654 aa17.25■□□□□ 0.35
SCN1B-204ENST00000596348 SCRN1Q12765 414 aa17.25■□□□□ 0.35
SCN1B-204ENST00000596348 ANKRD1Q15327 319 aa17.25■□□□□ 0.35
SCN1B-204ENST00000596348 PPP1R18Q6NYC8 613 aa17.25■□□□□ 0.35
SCN1B-204ENST00000596348 NECAB2Q7Z6G3 386 aa17.25■□□□□ 0.35
SCN1B-204ENST00000596348 ARRDC4Q8NCT1 418 aa17.25■□□□□ 0.35
SCN1B-204ENST00000596348 SLC26A6Q9BXS9 759 aa17.25■□□□□ 0.35
SCN1B-204ENST00000596348 RNF26Q9BY78 433 aaPredicted RBP17.25■□□□□ 0.35
SCN1B-204ENST00000596348 UPF3AQ9H1J1 476 aaKnown RBP17.25■□□□□ 0.35
SCN1B-204ENST00000596348 GNEQ9Y223 722 aaKnown RBP17.25■□□□□ 0.35
SCN1B-204ENST00000596348 B4DLN1 442 aa17.24■□□□□ 0.35
SCN1B-204ENST00000596348 hCG_1984214I3L0E3 225 aa17.24■□□□□ 0.35
SCN1B-204ENST00000596348 CTAGE5O15320 804 aa17.24■□□□□ 0.35
SCN1B-204ENST00000596348 DTNBO60941 627 aa17.24■□□□□ 0.35
SCN1B-204ENST00000596348 MYCNP04198 464 aaPredicted RBP17.24■□□□□ 0.35
SCN1B-204ENST00000596348 MRPL12P52815 198 aaKnown RBP17.24■□□□□ 0.35
SCN1B-204ENST00000596348 PGM5Q15124 567 aa17.24■□□□□ 0.35
SCN1B-204ENST00000596348 ME3Q16798 604 aa17.24■□□□□ 0.35
SCN1B-204ENST00000596348 IQSEC1Q6DN90 963 aa17.24■□□□□ 0.35
SCN1B-204ENST00000596348 ZNF713Q8N859 430 aaPredicted RBP17.24■□□□□ 0.35
SCN1B-204ENST00000596348 SMARCC2Q8TAQ2 1214 aa17.24■□□□□ 0.35
SCN1B-204ENST00000596348 MPHOSPH6Q99547 160 aaKnown RBP17.24■□□□□ 0.35
SCN1B-204ENST00000596348 SLKQ9H2G2 1235 aaPredicted RBP17.24■□□□□ 0.35
SCN1B-204ENST00000596348 C11orf49Q9H6J7 331 aa17.24■□□□□ 0.35
SCN1B-204ENST00000596348 ADAMTS3O15072 1205 aa17.23■□□□□ 0.35
SCN1B-204ENST00000596348 RGS20O76081 388 aa17.23■□□□□ 0.35
SCN1B-204ENST00000596348 ARIH2O95376 493 aa17.23■□□□□ 0.35
SCN1B-204ENST00000596348 GJA9P57773 515 aa17.23■□□□□ 0.35
SCN1B-204ENST00000596348 STXBP2Q15833 593 aa17.23■□□□□ 0.35
SCN1B-204ENST00000596348 VSIG10LQ86VR7 867 aa17.23■□□□□ 0.35
SCN1B-204ENST00000596348 KLHDC9Q8NEP7 349 aa17.23■□□□□ 0.35
SCN1B-204ENST00000596348 CUL5Q93034 780 aa17.23■□□□□ 0.35
SCN1B-204ENST00000596348 ZFP91Q96JP5 570 aaPredicted RBP17.23■□□□□ 0.35
SCN1B-204ENST00000596348 WDR11Q9BZH6 1224 aa17.23■□□□□ 0.35
SCN1B-204ENST00000596348 RIC8AQ9NPQ8 531 aa17.23■□□□□ 0.35
SCN1B-204ENST00000596348 RBM27Q9P2N5 1060 aaKnown RBP17.23■□□□□ 0.35
SCN1B-204ENST00000596348 KBTBD13C9JR72 458 aa17.22■□□□□ 0.35
SCN1B-204ENST00000596348 CPLX1O14810 134 aa17.22■□□□□ 0.35
SCN1B-204ENST00000596348 EIF3JO75822 258 aaKnown RBP17.22■□□□□ 0.35
SCN1B-204ENST00000596348 CTDNEP1O95476 244 aa17.22■□□□□ 0.35
SCN1B-204ENST00000596348 MYCLP12524 364 aaPredicted RBP17.22■□□□□ 0.35
SCN1B-204ENST00000596348 ADCY7P51828 1080 aa17.22■□□□□ 0.35
SCN1B-204ENST00000596348 DUSP28Q4G0W2 176 aa17.22■□□□□ 0.35
SCN1B-204ENST00000596348 CCSAPQ6IQ19 270 aaPredicted RBP17.22■□□□□ 0.35
SCN1B-204ENST00000596348 CCDC62Q6P9F0 684 aa17.22■□□□□ 0.35
SCN1B-204ENST00000596348 SEPT14Q6ZU15 432 aa17.22■□□□□ 0.35
SCN1B-204ENST00000596348 RNF180Q86T96 592 aa17.22■□□□□ 0.35
SCN1B-204ENST00000596348 TLK2Q86UE8 772 aa17.22■□□□□ 0.35
SCN1B-204ENST00000596348 NECAB1Q8N987 351 aa17.22■□□□□ 0.35
SCN1B-204ENST00000596348 SCFD2Q8WU76 684 aa17.22■□□□□ 0.35
SCN1B-204ENST00000596348 TBC1D32Q96NH3 1257 aa17.22■□□□□ 0.35
SCN1B-204ENST00000596348 BACH2Q9BYV9 841 aa17.22■□□□□ 0.35
SCN1B-204ENST00000596348 SMCO2A6NFE2 343 aa17.21■□□□□ 0.35
SCN1B-204ENST00000596348 C6orf222P0C671 652 aaPredicted RBP17.21■□□□□ 0.35
SCN1B-204ENST00000596348 CST5P28325 142 aaPredicted RBP17.21■□□□□ 0.35
SCN1B-204ENST00000596348 CCND2P30279 289 aa17.21■□□□□ 0.35
SCN1B-204ENST00000596348 NKX3-2P78367 333 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms