RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 KIF3AQ9Y496 699 aa17.15■□□□□ 0.34
DDX49-204ENST00000595858 ASB14A6NK59 587 aa17.14■□□□□ 0.33
DDX49-204ENST00000595858 FOSBP53539 338 aa17.14■□□□□ 0.33
DDX49-204ENST00000595858 TRIM29Q14134 588 aa17.14■□□□□ 0.33
DDX49-204ENST00000595858 C8orf76Q96K31 380 aa17.14■□□□□ 0.33
DDX49-204ENST00000595858 PXMP2Q9NR77 195 aa17.14■□□□□ 0.33
DDX49-204ENST00000595858 PCDHA4Q9UN74 947 aa17.14■□□□□ 0.33
DDX49-204ENST00000595858 LCTP09848 1927 aa17.14■□□□□ 0.33
DDX49-204ENST00000595858 PLXNA1Q9UIW2 1896 aa17.14■□□□□ 0.33
DDX49-204ENST00000595858 LOC102724159A0A0B4J2E5 919 aa17.14■□□□□ 0.33
DDX49-204ENST00000595858 CYP2C19P33261 490 aa17.14■□□□□ 0.33
DDX49-204ENST00000595858 PWP2Q15269 919 aaKnown RBP17.14■□□□□ 0.33
DDX49-204ENST00000595858 ARHGEF16Q5VV41 709 aa17.14■□□□□ 0.33
DDX49-204ENST00000595858 KRT40Q6A162 431 aa17.14■□□□□ 0.33
DDX49-204ENST00000595858 BLIDQ8IZY5 108 aa17.14■□□□□ 0.33
DDX49-204ENST00000595858 REXO1Q8N1G1 1221 aaKnown RBP17.14■□□□□ 0.33
DDX49-204ENST00000595858 DAGLBQ8NCG7 672 aa17.14■□□□□ 0.33
DDX49-204ENST00000595858 FOXD4L1Q9NU39 408 aa17.14■□□□□ 0.33
DDX49-204ENST00000595858 TMEM260Q9NX78 707 aa17.14■□□□□ 0.33
DDX49-204ENST00000595858 PCDHA6Q9UN73 950 aa17.14■□□□□ 0.33
DDX49-204ENST00000595858 PCDHA8Q9Y5H6 950 aa17.14■□□□□ 0.33
DDX49-204ENST00000595858 DDX49Q9Y6V7 483 aaKnown RBP17.14■□□□□ 0.33
DDX49-204ENST00000595858 RBBP6Q7Z6E9 1792 aaKnown RBP17.13■□□□□ 0.33
DDX49-204ENST00000595858 SPDYE3A6NKU9 549 aa17.13■□□□□ 0.33
DDX49-204ENST00000595858 FOSP01100 380 aaPredicted RBP17.13■□□□□ 0.33
DDX49-204ENST00000595858 HMGCRP04035 888 aa17.13■□□□□ 0.33
DDX49-204ENST00000595858 EIF2AK2P19525 551 aaKnown RBP17.13■□□□□ 0.33
DDX49-204ENST00000595858 SLC9C1Q4G0N8 1177 aa17.13■□□□□ 0.33
DDX49-204ENST00000595858 JAKMIP3Q5VZ66 844 aa17.13■□□□□ 0.33
DDX49-204ENST00000595858 MFSD14CQ5VZR4 134 aa17.13■□□□□ 0.33
DDX49-204ENST00000595858 MORC4Q8TE76 937 aa17.13■□□□□ 0.33
DDX49-204ENST00000595858 SH3TC2Q8TF17 1288 aa17.13■□□□□ 0.33
DDX49-204ENST00000595858 IWS1Q96ST2 819 aa17.13■□□□□ 0.33
DDX49-204ENST00000595858 PDCD2LQ9BRP1 358 aa17.13■□□□□ 0.33
DDX49-204ENST00000595858 MCOLN1Q9GZU1 580 aa17.13■□□□□ 0.33
DDX49-204ENST00000595858 SYNGAP1Q96PV0 1343 aa17.12■□□□□ 0.33
DDX49-204ENST00000595858 SNAI1O95863 264 aaPredicted RBP17.12■□□□□ 0.33
DDX49-204ENST00000595858 EDNRBP24530 442 aa17.12■□□□□ 0.33
DDX49-204ENST00000595858 GUCY1B3Q02153 619 aa17.12■□□□□ 0.33
DDX49-204ENST00000595858 TRIM32Q13049 653 aa17.12■□□□□ 0.33
DDX49-204ENST00000595858 AP3B2Q13367 1082 aa17.12■□□□□ 0.33
DDX49-204ENST00000595858 ARMCX2Q7L311 632 aa17.12■□□□□ 0.33
DDX49-204ENST00000595858 FBXO18Q8NFZ0 1043 aa17.12■□□□□ 0.33
DDX49-204ENST00000595858 RASGRP4Q8TDF6 673 aa17.12■□□□□ 0.33
DDX49-204ENST00000595858 HTTP42858 3142 aa17.12■□□□□ 0.33
DDX49-204ENST00000595858 RPTORQ8N122 1335 aa17.12■□□□□ 0.33
DDX49-204ENST00000595858 B4DLN1 442 aa17.12■□□□□ 0.33
DDX49-204ENST00000595858 M0R2N6 131 aa17.12■□□□□ 0.33
DDX49-204ENST00000595858 MMP1P03956 469 aa17.12■□□□□ 0.33
DDX49-204ENST00000595858 HSP90AA1P07900 732 aaKnown RBP17.12■□□□□ 0.33
DDX49-204ENST00000595858 NR3C2P08235 984 aa17.12■□□□□ 0.33
DDX49-204ENST00000595858 BECN1Q14457 450 aa17.12■□□□□ 0.33
DDX49-204ENST00000595858 COL13A1Q5TAT6 717 aaPredicted RBP17.12■□□□□ 0.33
DDX49-204ENST00000595858 MCTP2Q6DN12 878 aa17.12■□□□□ 0.33
DDX49-204ENST00000595858 PGBD1Q96JS3 809 aa17.12■□□□□ 0.33
DDX49-204ENST00000595858 MPHOSPH6Q99547 160 aaKnown RBP17.12■□□□□ 0.33
DDX49-204ENST00000595858 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.12■□□□□ 0.33
DDX49-204ENST00000595858 FRMPD4Q14CM0 1322 aa17.11■□□□□ 0.33
DDX49-204ENST00000595858 INHAP05111 366 aa17.11■□□□□ 0.33
DDX49-204ENST00000595858 UBXN2AP68543 259 aa17.11■□□□□ 0.33
DDX49-204ENST00000595858 CACNB2Q08289 660 aaPredicted RBP17.11■□□□□ 0.33
DDX49-204ENST00000595858 PGM5Q15124 567 aa17.11■□□□□ 0.33
DDX49-204ENST00000595858 OXER1Q8TDS5 423 aa17.11■□□□□ 0.33
DDX49-204ENST00000595858 ANO3Q9BYT9 981 aa17.11■□□□□ 0.33
DDX49-204ENST00000595858 PDE4DQ08499 809 aa17.1■□□□□ 0.33
DDX49-204ENST00000595858 PRAMEF19Q5SWL8 479 aa17.1■□□□□ 0.33
DDX49-204ENST00000595858 LARP1BQ659C4 914 aaKnown RBP17.1■□□□□ 0.33
DDX49-204ENST00000595858 VSIG10LQ86VR7 867 aa17.1■□□□□ 0.33
DDX49-204ENST00000595858 IL31RAQ8NI17 732 aa17.1■□□□□ 0.33
DDX49-204ENST00000595858 EHMT1Q9H9B1 1298 aa17.1■□□□□ 0.33
DDX49-204ENST00000595858 BRMS1Q9HCU9 246 aa17.1■□□□□ 0.33
DDX49-204ENST00000595858 CNPY2Q9Y2B0 182 aa17.1■□□□□ 0.33
DDX49-204ENST00000595858 PRKAR2AP13861 404 aaKnown RBP17.1■□□□□ 0.33
DDX49-204ENST00000595858 KRT2P35908 639 aa17.1■□□□□ 0.33
DDX49-204ENST00000595858 STXBP2Q15833 593 aa17.1■□□□□ 0.33
DDX49-204ENST00000595858 MAP3K21Q5TCX8 1036 aa17.1■□□□□ 0.33
DDX49-204ENST00000595858 DIS3L2Q8IYB7 885 aaKnown RBP17.1■□□□□ 0.33
DDX49-204ENST00000595858 SPRYD3Q8NCJ5 442 aa17.1■□□□□ 0.33
DDX49-204ENST00000595858 ABHD16BQ9H3Z7 469 aa17.1■□□□□ 0.33
DDX49-204ENST00000595858 MCM3APO60318 1980 aa17.09■□□□□ 0.33
DDX49-204ENST00000595858 BTBD18B2RXH4 712 aa17.09■□□□□ 0.33
DDX49-204ENST00000595858 MYCLP12524 364 aaPredicted RBP17.09■□□□□ 0.33
DDX49-204ENST00000595858 SAFBQ15424 915 aaKnown RBP eCLIP17.09■□□□□ 0.33
DDX49-204ENST00000595858 EEPD1Q7L9B9 569 aa17.09■□□□□ 0.33
DDX49-204ENST00000595858 KATNBL1Q9H079 304 aa17.09■□□□□ 0.33
DDX49-204ENST00000595858 DAXXQ9UER7 740 aaPredicted RBP17.09■□□□□ 0.33
DDX49-204ENST00000595858 NRBP1Q9UHY1 535 aa17.09■□□□□ 0.33
DDX49-204ENST00000595858 CENPFP49454 3210 aa17.08■□□□□ 0.33
DDX49-204ENST00000595858 CYBAP13498 195 aa17.08■□□□□ 0.33
DDX49-204ENST00000595858 CCND2P30279 289 aa17.08■□□□□ 0.33
DDX49-204ENST00000595858 SREBF1P36956 1147 aa17.08■□□□□ 0.33
DDX49-204ENST00000595858 NR5A1Q13285 461 aa17.08■□□□□ 0.33
DDX49-204ENST00000595858 ACVR2BQ13705 512 aa17.08■□□□□ 0.33
DDX49-204ENST00000595858 PCNX4Q63HM2 1172 aa17.08■□□□□ 0.33
DDX49-204ENST00000595858 TRPV1Q8NER1 839 aa17.08■□□□□ 0.33
DDX49-204ENST00000595858 ARMC5Q96C12 935 aa17.08■□□□□ 0.33
DDX49-204ENST00000595858 EIF3JO75822 258 aaKnown RBP17.07■□□□□ 0.32
DDX49-204ENST00000595858 ZNF865P0CJ78 1059 aaPredicted RBP17.07■□□□□ 0.32
DDX49-204ENST00000595858 PDCP20941 246 aa17.07■□□□□ 0.32
DDX49-204ENST00000595858 MRPS9P82933 396 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms