RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 KPNA6O60684 536 aa26.52■■□□□ 1.84
SSBP4-203ENST00000593641 CYP2C9P11712 490 aa26.52■■□□□ 1.84
SSBP4-203ENST00000593641 CDC37Q16543 378 aaPredicted RBP26.52■■□□□ 1.84
SSBP4-203ENST00000593641 PLEKHM2Q8IWE5 1019 aa26.52■■□□□ 1.84
SSBP4-203ENST00000593641 RGS22Q8NE09 1264 aa26.52■■□□□ 1.84
SSBP4-203ENST00000593641 UBA5Q9GZZ9 404 aa26.52■■□□□ 1.84
SSBP4-203ENST00000593641 OSBPL3Q9H4L5 887 aa26.52■■□□□ 1.84
SSBP4-203ENST00000593641 KAT14Q9H8E8 782 aa26.52■■□□□ 1.84
SSBP4-203ENST00000593641 HIP1O00291 1037 aa26.51■■□□□ 1.83
SSBP4-203ENST00000593641 KDM4AO75164 1064 aa26.51■■□□□ 1.83
SSBP4-203ENST00000593641 TXNP10599 105 aaKnown RBP26.51■■□□□ 1.83
SSBP4-203ENST00000593641 TTLL4Q14679 1199 aa26.51■■□□□ 1.83
SSBP4-203ENST00000593641 PPM1EQ8WY54 764 aa26.51■■□□□ 1.83
SSBP4-203ENST00000593641 CPVLQ9H3G5 476 aa26.51■■□□□ 1.83
SSBP4-203ENST00000593641 KIAA1217Q5T5P2 1943 aa26.51■■□□□ 1.83
SSBP4-203ENST00000593641 ABCB11O95342 1321 aa26.5■■□□□ 1.83
SSBP4-203ENST00000593641 A6NJR5 290 aa26.5■■□□□ 1.83
SSBP4-203ENST00000593641 NBPF20Q3BBV1 942 aa26.5■■□□□ 1.83
SSBP4-203ENST00000593641 TJAP1Q5JTD0 557 aa26.5■■□□□ 1.83
SSBP4-203ENST00000593641 NFRKBQ6P4R8 1299 aa26.5■■□□□ 1.83
SSBP4-203ENST00000593641 TANC1Q9C0D5 1861 aa26.5■■□□□ 1.83
SSBP4-203ENST00000593641 TRIP12Q14669 1992 aaPredicted RBP26.49■■□□□ 1.83
SSBP4-203ENST00000593641 B4E1Z4 1266 aa26.49■■□□□ 1.83
SSBP4-203ENST00000593641 NUCB1Q02818 461 aa26.49■■□□□ 1.83
SSBP4-203ENST00000593641 ASPRV1Q53RT3 343 aa26.49■■□□□ 1.83
SSBP4-203ENST00000593641 COPS5Q92905 334 aa26.49■■□□□ 1.83
SSBP4-203ENST00000593641 MAF1Q9H063 256 aa26.49■■□□□ 1.83
SSBP4-203ENST00000593641 CHD7Q9P2D1 2997 aa26.49■■□□□ 1.83
SSBP4-203ENST00000593641 YBX2Q9Y2T7 364 aaKnown RBP26.49■■□□□ 1.83
SSBP4-203ENST00000593641 DHX16O60231 1041 aaKnown RBP26.48■■□□□ 1.83
SSBP4-203ENST00000593641 IGFBP4P22692 258 aa26.48■■□□□ 1.83
SSBP4-203ENST00000593641 IMMTQ16891 758 aaKnown RBP26.48■■□□□ 1.83
SSBP4-203ENST00000593641 DEFB128Q7Z7B8 93 aa26.48■■□□□ 1.83
SSBP4-203ENST00000593641 ZSCAN10Q96SZ4 725 aaPredicted RBP26.48■■□□□ 1.83
SSBP4-203ENST00000593641 NOD1Q9Y239 953 aa26.48■■□□□ 1.83
SSBP4-203ENST00000593641 NCOR1O75376 2440 aa26.47■■□□□ 1.83
SSBP4-203ENST00000593641 ACTN1P12814 892 aa26.47■■□□□ 1.83
SSBP4-203ENST00000593641 ATP2A2P16615 1042 aaKnown RBP26.47■■□□□ 1.83
SSBP4-203ENST00000593641 RABGGTBP53611 331 aa26.47■■□□□ 1.83
SSBP4-203ENST00000593641 PTPN11Q06124 597 aaPredicted RBP26.47■■□□□ 1.83
SSBP4-203ENST00000593641 PPP2R2DQ66LE6 453 aa26.47■■□□□ 1.83
SSBP4-203ENST00000593641 MCF2L2Q86YR7 1114 aa26.47■■□□□ 1.83
SSBP4-203ENST00000593641 ADGRF4Q8IZF3 695 aa26.47■■□□□ 1.83
SSBP4-203ENST00000593641 RETREG2Q8NC44 543 aa26.47■■□□□ 1.83
SSBP4-203ENST00000593641 DSCC1Q9BVC3 393 aa26.47■■□□□ 1.83
SSBP4-203ENST00000593641 PCDHA11Q9Y5I1 949 aa26.47■■□□□ 1.83
SSBP4-203ENST00000593641 ARIH2O95376 493 aa26.46■■□□□ 1.83
SSBP4-203ENST00000593641 PARP1P09874 1014 aaKnown RBP26.46■■□□□ 1.83
SSBP4-203ENST00000593641 RFC2P35250 354 aa26.46■■□□□ 1.83
SSBP4-203ENST00000593641 ENAHQ8N8S7 591 aaPredicted RBP26.46■■□□□ 1.83
SSBP4-203ENST00000593641 NSUN6Q8TEA1 469 aaKnown RBP26.46■■□□□ 1.83
SSBP4-203ENST00000593641 ANKS1AQ92625 1134 aa26.46■■□□□ 1.83
SSBP4-203ENST00000593641 UBAC1Q9BSL1 405 aa26.46■■□□□ 1.83
SSBP4-203ENST00000593641 KRT23Q9C075 422 aa26.46■■□□□ 1.83
SSBP4-203ENST00000593641 CTNNA3Q9UI47 895 aa26.46■■□□□ 1.83
SSBP4-203ENST00000593641 MUC3AQ02505 3323 aa26.45■■□□□ 1.82
SSBP4-203ENST00000593641 PITPNM1O00562 1244 aa26.45■■□□□ 1.82
SSBP4-203ENST00000593641 CHMP4BP1P59074 171 aa26.45■■□□□ 1.82
SSBP4-203ENST00000593641 ADGRE1Q14246 886 aa26.45■■□□□ 1.82
SSBP4-203ENST00000593641 SYTL5Q8TDW5 730 aaPredicted RBP26.45■■□□□ 1.82
SSBP4-203ENST00000593641 VWCEQ96DN2 955 aa26.45■■□□□ 1.82
SSBP4-203ENST00000593641 CNNM2Q9H8M5 875 aa26.45■■□□□ 1.82
SSBP4-203ENST00000593641 PRDM6Q9NQX0 595 aa26.45■■□□□ 1.82
SSBP4-203ENST00000593641 ZSWIM5Q9P217 1185 aa26.45■■□□□ 1.82
SSBP4-203ENST00000593641 THEGQ9P2T0 379 aa26.45■■□□□ 1.82
SSBP4-203ENST00000593641 TET1Q8NFU7 2136 aa26.45■■□□□ 1.82
SSBP4-203ENST00000593641 IGHDP01880 384 aa26.44■■□□□ 1.82
SSBP4-203ENST00000593641 BFSP2Q13515 415 aa26.44■■□□□ 1.82
SSBP4-203ENST00000593641 QRICH1Q2TAL8 776 aa26.44■■□□□ 1.82
SSBP4-203ENST00000593641 SEPT14Q6ZU15 432 aa26.44■■□□□ 1.82
SSBP4-203ENST00000593641 FBXO11Q86XK2 927 aa26.44■■□□□ 1.82
SSBP4-203ENST00000593641 PPP1R13LQ8WUF5 828 aa26.44■■□□□ 1.82
SSBP4-203ENST00000593641 TAAR1Q96RJ0 339 aa26.44■■□□□ 1.82
SSBP4-203ENST00000593641 IWS1Q96ST2 819 aa26.44■■□□□ 1.82
SSBP4-203ENST00000593641 RMDN3Q96TC7 470 aa26.44■■□□□ 1.82
SSBP4-203ENST00000593641 MRPL11Q9Y3B7 192 aaKnown RBP26.44■■□□□ 1.82
SSBP4-203ENST00000593641 GH1P01241 217 aa26.43■■□□□ 1.82
SSBP4-203ENST00000593641 STXBP2Q15833 593 aa26.43■■□□□ 1.82
SSBP4-203ENST00000593641 CCDC85BQ15834 202 aaPredicted RBP26.43■■□□□ 1.82
SSBP4-203ENST00000593641 CCDC62Q6P9F0 684 aa26.43■■□□□ 1.82
SSBP4-203ENST00000593641 ATXN2LQ8WWM7 1075 aaKnown RBP26.43■■□□□ 1.82
SSBP4-203ENST00000593641 TBC1D5Q92609 795 aa26.43■■□□□ 1.82
SSBP4-203ENST00000593641 MYH7BA7E2Y1 1941 aa26.43■■□□□ 1.82
SSBP4-203ENST00000593641 MMP3P08254 477 aa26.42■■□□□ 1.82
SSBP4-203ENST00000593641 IQCF3P0C7M6 154 aa26.42■■□□□ 1.82
SSBP4-203ENST00000593641 MYOGP15173 224 aa26.42■■□□□ 1.82
SSBP4-203ENST00000593641 LY6KQ17RY6 165 aa26.42■■□□□ 1.82
SSBP4-203ENST00000593641 TMEM67Q5HYA8 995 aa26.42■■□□□ 1.82
SSBP4-203ENST00000593641 ARHGEF16Q5VV41 709 aa26.42■■□□□ 1.82
SSBP4-203ENST00000593641 CCDC155Q8N6L0 562 aa26.42■■□□□ 1.82
SSBP4-203ENST00000593641 AFG1LQ8WV93 481 aa26.42■■□□□ 1.82
SSBP4-203ENST00000593641 YTHDC1Q96MU7 727 aaKnown RBP26.42■■□□□ 1.82
SSBP4-203ENST00000593641 SLC9A7Q96T83 725 aa26.42■■□□□ 1.82
SSBP4-203ENST00000593641 FTOQ9C0B1 505 aaKnown RBP eCLIP26.42■■□□□ 1.82
SSBP4-203ENST00000593641 VAT1LQ9HCJ6 419 aa26.42■■□□□ 1.82
SSBP4-203ENST00000593641 COL20A1Q9P218 1284 aa26.42■■□□□ 1.82
SSBP4-203ENST00000593641 IFIT1BQ5T764 474 aaKnown RBP26.41■■□□□ 1.82
SSBP4-203ENST00000593641 CASTP20810 708 aaKnown RBP26.4■■□□□ 1.82
SSBP4-203ENST00000593641 ARHGAP1Q07960 439 aa26.4■■□□□ 1.82
SSBP4-203ENST00000593641 PTGISQ16647 500 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms