RNA–Protein interactions for RNA: ENST00000593594.1

PDE4C-205, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 481 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-205ENST00000593594 ZMYM6O95789 1325 aa21.88■■□□□ 1.09
PDE4C-205ENST00000593594 RFXAPO00287 272 aa21.88■■□□□ 1.09
PDE4C-205ENST00000593594 PITPNM1O00562 1244 aa21.88■■□□□ 1.09
PDE4C-205ENST00000593594 IQCF3P0C7M6 154 aa21.88■■□□□ 1.09
PDE4C-205ENST00000593594 SNHG28P0DPA3 235 aa21.88■■□□□ 1.09
PDE4C-205ENST00000593594 TXNP10599 105 aaKnown RBP21.88■■□□□ 1.09
PDE4C-205ENST00000593594 HAND2P61296 217 aa21.88■■□□□ 1.09
PDE4C-205ENST00000593594 PTPN11Q06124 597 aaPredicted RBP21.88■■□□□ 1.09
PDE4C-205ENST00000593594 ZNF589Q86UQ0 364 aaPredicted RBP21.88■■□□□ 1.09
PDE4C-205ENST00000593594 RETREG2Q8NC44 543 aa21.88■■□□□ 1.09
PDE4C-205ENST00000593594 SLC9A7Q96T83 725 aa21.88■■□□□ 1.09
PDE4C-205ENST00000593594 REV3LO60673 3130 aa21.87■■□□□ 1.09
PDE4C-205ENST00000593594 PRRC2BQ5JSZ5 2229 aaKnown RBP21.87■■□□□ 1.09
PDE4C-205ENST00000593594 POU3F3P20264 500 aaPredicted RBP21.87■■□□□ 1.09
PDE4C-205ENST00000593594 MFSD6Q6ZSS7 791 aa21.87■■□□□ 1.09
PDE4C-205ENST00000593594 MTCH2Q9Y6C9 303 aa21.87■■□□□ 1.09
PDE4C-205ENST00000593594 B4DLN1 442 aa21.86■■□□□ 1.09
PDE4C-205ENST00000593594 ARIH2O95376 493 aa21.86■■□□□ 1.09
PDE4C-205ENST00000593594 BMP1P13497 986 aa21.86■■□□□ 1.09
PDE4C-205ENST00000593594 MRPL12P52815 198 aaKnown RBP21.86■■□□□ 1.09
PDE4C-205ENST00000593594 TFF2Q03403 129 aa21.86■■□□□ 1.09
PDE4C-205ENST00000593594 NMIQ13287 307 aaPredicted RBP21.86■■□□□ 1.09
PDE4C-205ENST00000593594 TICAM2Q86XR7 235 aa21.86■■□□□ 1.09
PDE4C-205ENST00000593594 RGS22Q8NE09 1264 aa21.86■■□□□ 1.09
PDE4C-205ENST00000593594 PHOSPHO2Q8TCD6 241 aa21.86■■□□□ 1.09
PDE4C-205ENST00000593594 FTOQ9C0B1 505 aaKnown RBP eCLIP21.86■■□□□ 1.09
PDE4C-205ENST00000593594 CERS4Q9HA82 394 aa21.86■■□□□ 1.09
PDE4C-205ENST00000593594 GTPBP6O43824 516 aaPredicted RBP21.85■■□□□ 1.09
PDE4C-205ENST00000593594 PCP11498 1178 aaKnown RBP21.85■■□□□ 1.09
PDE4C-205ENST00000593594 BFSP2Q13515 415 aa21.85■■□□□ 1.09
PDE4C-205ENST00000593594 SKIV2LQ15477 1246 aaKnown RBP21.85■■□□□ 1.09
PDE4C-205ENST00000593594 USH1GQ495M9 461 aa21.85■■□□□ 1.09
PDE4C-205ENST00000593594 TBC1D10CQ8IV04 446 aa21.85■■□□□ 1.09
PDE4C-205ENST00000593594 NECAB3Q96P71 396 aaPredicted RBP21.85■■□□□ 1.09
PDE4C-205ENST00000593594 NOD1Q9Y239 953 aa21.85■■□□□ 1.09
PDE4C-205ENST00000593594 EPOPA6NHQ4 379 aa21.84■■□□□ 1.09
PDE4C-205ENST00000593594 GOLGA8HP0CJ92 632 aa21.84■■□□□ 1.09
PDE4C-205ENST00000593594 CHMP4BP1P59074 171 aa21.84■■□□□ 1.09
PDE4C-205ENST00000593594 AAK1Q2M2I8 961 aa21.84■■□□□ 1.09
PDE4C-205ENST00000593594 GPATCH4Q5T3I0 446 aaKnown RBP21.84■■□□□ 1.09
PDE4C-205ENST00000593594 HERC6Q8IVU3 1022 aa21.84■■□□□ 1.09
PDE4C-205ENST00000593594 CPVLQ9H3G5 476 aa21.84■■□□□ 1.09
PDE4C-205ENST00000593594 RAPGEFL1Q9UHV5 662 aa21.84■■□□□ 1.09
PDE4C-205ENST00000593594 TCF20Q9UGU0 1960 aaKnown RBP21.84■■□□□ 1.09
PDE4C-205ENST00000593594 XIRP2A4UGR9 3374 aa21.84■■□□□ 1.09
PDE4C-205ENST00000593594 TANC1Q9C0D5 1861 aa21.83■■□□□ 1.09
PDE4C-205ENST00000593594 TET1Q8NFU7 2136 aa21.83■■□□□ 1.09
PDE4C-205ENST00000593594 CCDC171Q6TFL3 1326 aa21.83■■□□□ 1.09
PDE4C-205ENST00000593594 ARHGEF15O94989 841 aa21.83■■□□□ 1.09
PDE4C-205ENST00000593594 KCNQ1P51787 676 aa21.83■■□□□ 1.09
PDE4C-205ENST00000593594 TAP1Q03518 808 aa21.83■■□□□ 1.09
PDE4C-205ENST00000593594 PTGISQ16647 500 aa21.83■■□□□ 1.09
PDE4C-205ENST00000593594 CCDC62Q6P9F0 684 aa21.83■■□□□ 1.09
PDE4C-205ENST00000593594 UBA5Q9GZZ9 404 aa21.83■■□□□ 1.09
PDE4C-205ENST00000593594 KIF28PB7ZC32 967 aa21.82■■□□□ 1.08
PDE4C-205ENST00000593594 AFG1LQ8WV93 481 aa21.82■■□□□ 1.08
PDE4C-205ENST00000593594 ARNTL2Q8WYA1 636 aa21.82■■□□□ 1.08
PDE4C-205ENST00000593594 TBC1D5Q92609 795 aa21.82■■□□□ 1.08
PDE4C-205ENST00000593594 ESR2Q92731 530 aa21.82■■□□□ 1.08
PDE4C-205ENST00000593594 CTAGE1Q96RT6 745 aa21.82■■□□□ 1.08
PDE4C-205ENST00000593594 ZKSCAN3Q9BRR0 538 aa21.82■■□□□ 1.08
PDE4C-205ENST00000593594 RNF41Q9H4P4 317 aaPredicted RBP21.82■■□□□ 1.08
PDE4C-205ENST00000593594 NEDD4P46934 1319 aa21.81■■□□□ 1.08
PDE4C-205ENST00000593594 BAIAP3O94812 1187 aa21.81■■□□□ 1.08
PDE4C-205ENST00000593594 CDC37Q16543 378 aaPredicted RBP21.81■■□□□ 1.08
PDE4C-205ENST00000593594 LY6KQ17RY6 165 aa21.81■■□□□ 1.08
PDE4C-205ENST00000593594 KRT40Q6A162 431 aa21.81■■□□□ 1.08
PDE4C-205ENST00000593594 SEPT14Q6ZU15 432 aa21.81■■□□□ 1.08
PDE4C-205ENST00000593594 DGKHQ86XP1 1220 aa21.81■■□□□ 1.08
PDE4C-205ENST00000593594 CCDC155Q8N6L0 562 aa21.81■■□□□ 1.08
PDE4C-205ENST00000593594 TAAR1Q96RJ0 339 aa21.81■■□□□ 1.08
PDE4C-205ENST00000593594 MAF1Q9H063 256 aa21.81■■□□□ 1.08
PDE4C-205ENST00000593594 TRIP12Q14669 1992 aaPredicted RBP21.8■■□□□ 1.08
PDE4C-205ENST00000593594 TRIM6-TRIM34B2RNG4 842 aa21.8■■□□□ 1.08
PDE4C-205ENST00000593594 GH1P01241 217 aa21.8■■□□□ 1.08
PDE4C-205ENST00000593594 MMP3P08254 477 aa21.8■■□□□ 1.08
PDE4C-205ENST00000593594 ARHGAP1Q07960 439 aa21.8■■□□□ 1.08
PDE4C-205ENST00000593594 HDAC1Q13547 482 aaPredicted RBP21.8■■□□□ 1.08
PDE4C-205ENST00000593594 GDF6Q6KF10 455 aaPredicted RBP21.8■■□□□ 1.08
PDE4C-205ENST00000593594 SESTD1Q86VW0 696 aa21.8■■□□□ 1.08
PDE4C-205ENST00000593594 CAGE1Q8TC20 777 aa21.8■■□□□ 1.08
PDE4C-205ENST00000593594 SYTL5Q8TDW5 730 aaPredicted RBP21.8■■□□□ 1.08
PDE4C-205ENST00000593594 NSUN6Q8TEA1 469 aaKnown RBP21.8■■□□□ 1.08
PDE4C-205ENST00000593594 AFAP1L1Q8TED9 768 aa21.8■■□□□ 1.08
PDE4C-205ENST00000593594 KAT2BQ92831 832 aa21.8■■□□□ 1.08
PDE4C-205ENST00000593594 ABCB11O95342 1321 aa21.8■■□□□ 1.08
PDE4C-205ENST00000593594 RRP1P56182 461 aaKnown RBP21.79■■□□□ 1.08
PDE4C-205ENST00000593594 GPNMBQ14956 572 aa21.79■■□□□ 1.08
PDE4C-205ENST00000593594 CHST3Q7LGC8 479 aa21.79■■□□□ 1.08
PDE4C-205ENST00000593594 PNMA1Q8ND90 353 aa21.79■■□□□ 1.08
PDE4C-205ENST00000593594 RILPL2Q969X0 211 aa21.79■■□□□ 1.08
PDE4C-205ENST00000593594 CRBNQ96SW2 442 aa21.79■■□□□ 1.08
PDE4C-205ENST00000593594 COL20A1Q9P218 1284 aa21.79■■□□□ 1.08
PDE4C-205ENST00000593594 ZNF213O14771 459 aa21.78■■□□□ 1.08
PDE4C-205ENST00000593594 TLL1O43897 1013 aa21.78■■□□□ 1.08
PDE4C-205ENST00000593594 SELPP16109 830 aa21.78■■□□□ 1.08
PDE4C-205ENST00000593594 CASTP20810 708 aaKnown RBP21.78■■□□□ 1.08
PDE4C-205ENST00000593594 KCNJ6P48051 423 aa21.78■■□□□ 1.08
PDE4C-205ENST00000593594 MFAP1P55081 439 aaKnown RBP21.78■■□□□ 1.08
PDE4C-205ENST00000593594 WDR5P61964 334 aaKnown RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms