RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 FAM47CQ5HY64 1035 aa23.93■■□□□ 1.42
TRIM47-207ENST00000593089 OTOP2Q7RTS6 562 aa23.93■■□□□ 1.42
TRIM47-207ENST00000593089 RGS22Q8NE09 1264 aa23.93■■□□□ 1.42
TRIM47-207ENST00000593089 SCLYQ96I15 445 aa23.93■■□□□ 1.42
TRIM47-207ENST00000593089 KRT23Q9C075 422 aa23.93■■□□□ 1.42
TRIM47-207ENST00000593089 IL25Q9H293 177 aa23.93■■□□□ 1.42
TRIM47-207ENST00000593089 MTIF3Q9H2K0 278 aaKnown RBP23.93■■□□□ 1.42
TRIM47-207ENST00000593089 GBF1Q92538 1859 aa23.92■■□□□ 1.42
TRIM47-207ENST00000593089 PARP1P09874 1014 aaKnown RBP23.92■■□□□ 1.42
TRIM47-207ENST00000593089 CYP2C9P11712 490 aa23.92■■□□□ 1.42
TRIM47-207ENST00000593089 QRICH1Q2TAL8 776 aa23.92■■□□□ 1.42
TRIM47-207ENST00000593089 PPP1R13LQ8WUF5 828 aa23.92■■□□□ 1.42
TRIM47-207ENST00000593089 UBAC1Q9BSL1 405 aa23.92■■□□□ 1.42
TRIM47-207ENST00000593089 VAT1LQ9HCJ6 419 aa23.92■■□□□ 1.42
TRIM47-207ENST00000593089 ARIH2O95376 493 aa23.91■■□□□ 1.42
TRIM47-207ENST00000593089 SUPT20HL2P0C7V6 817 aa23.91■■□□□ 1.42
TRIM47-207ENST00000593089 TTLL4Q14679 1199 aa23.91■■□□□ 1.42
TRIM47-207ENST00000593089 NBPF20Q3BBV1 942 aa23.91■■□□□ 1.42
TRIM47-207ENST00000593089 TAAR1Q96RJ0 339 aa23.91■■□□□ 1.42
TRIM47-207ENST00000593089 CNNM2Q9H8M5 875 aa23.91■■□□□ 1.42
TRIM47-207ENST00000593089 SCN10AQ9Y5Y9 1956 aa23.91■■□□□ 1.42
TRIM47-207ENST00000593089 CUL9Q8IWT3 2517 aa23.9■■□□□ 1.42
TRIM47-207ENST00000593089 RAB30Q15771 203 aa23.9■■□□□ 1.42
TRIM47-207ENST00000593089 FBXO11Q86XK2 927 aa23.9■■□□□ 1.42
TRIM47-207ENST00000593089 RPUSD2Q8IZ73 545 aaKnown RBP23.9■■□□□ 1.42
TRIM47-207ENST00000593089 SYTL5Q8TDW5 730 aaPredicted RBP23.9■■□□□ 1.42
TRIM47-207ENST00000593089 JMJD4Q9H9V9 463 aa23.9■■□□□ 1.42
TRIM47-207ENST00000593089 COL20A1Q9P218 1284 aa23.9■■□□□ 1.42
TRIM47-207ENST00000593089 MSRAQ9UJ68 235 aa23.9■■□□□ 1.42
TRIM47-207ENST00000593089 A6NJR5 290 aa23.89■■□□□ 1.41
TRIM47-207ENST00000593089 PDE4AP27815 886 aa23.89■■□□□ 1.41
TRIM47-207ENST00000593089 IFIT1BQ5T764 474 aaKnown RBP23.89■■□□□ 1.41
TRIM47-207ENST00000593089 SEPT14Q6ZU15 432 aa23.89■■□□□ 1.41
TRIM47-207ENST00000593089 MCF2L2Q86YR7 1114 aa23.89■■□□□ 1.41
TRIM47-207ENST00000593089 PRDM12Q9H4Q4 367 aa23.89■■□□□ 1.41
TRIM47-207ENST00000593089 KPNA6O60684 536 aa23.88■■□□□ 1.41
TRIM47-207ENST00000593089 GSPT1P15170 499 aaKnown RBP23.88■■□□□ 1.41
TRIM47-207ENST00000593089 CHMP4BP1P59074 171 aa23.88■■□□□ 1.41
TRIM47-207ENST00000593089 STAG2Q8N3U4 1231 aa23.88■■□□□ 1.41
TRIM47-207ENST00000593089 NSUN6Q8TEA1 469 aaKnown RBP23.88■■□□□ 1.41
TRIM47-207ENST00000593089 GAS2L1Q99501 681 aaPredicted RBP23.88■■□□□ 1.41
TRIM47-207ENST00000593089 MAF1Q9H063 256 aa23.88■■□□□ 1.41
TRIM47-207ENST00000593089 NKX2-4Q9H2Z4 354 aa23.88■■□□□ 1.41
TRIM47-207ENST00000593089 MRPL11Q9Y3B7 192 aaKnown RBP23.88■■□□□ 1.41
TRIM47-207ENST00000593089 SCN5AQ14524 2016 aa23.88■■□□□ 1.41
TRIM47-207ENST00000593089 KIAA1217Q5T5P2 1943 aa23.87■■□□□ 1.41
TRIM47-207ENST00000593089 ZBBXA8MT70 800 aa23.87■■□□□ 1.41
TRIM47-207ENST00000593089 TTC22Q5TAA0 569 aa23.87■■□□□ 1.41
TRIM47-207ENST00000593089 DEFB128Q7Z7B8 93 aa23.87■■□□□ 1.41
TRIM47-207ENST00000593089 USP38Q8NB14 1042 aa23.87■■□□□ 1.41
TRIM47-207ENST00000593089 VWCEQ96DN2 955 aa23.87■■□□□ 1.41
TRIM47-207ENST00000593089 RMDN3Q96TC7 470 aa23.87■■□□□ 1.41
TRIM47-207ENST00000593089 SUPT16HQ9Y5B9 1047 aaKnown RBP23.87■■□□□ 1.41
TRIM47-207ENST00000593089 STXBP2Q15833 593 aa23.86■■□□□ 1.41
TRIM47-207ENST00000593089 LY6KQ17RY6 165 aa23.86■■□□□ 1.41
TRIM47-207ENST00000593089 NFRKBQ6P4R8 1299 aa23.86■■□□□ 1.41
TRIM47-207ENST00000593089 CCDC62Q6P9F0 684 aa23.86■■□□□ 1.41
TRIM47-207ENST00000593089 CYB5R4Q7L1T6 521 aa23.86■■□□□ 1.41
TRIM47-207ENST00000593089 YBX2Q9Y2T7 364 aaKnown RBP23.86■■□□□ 1.41
TRIM47-207ENST00000593089 SLC4A7Q9Y6M7 1214 aa23.86■■□□□ 1.41
TRIM47-207ENST00000593089 CFBP00751 764 aa23.85■■□□□ 1.41
TRIM47-207ENST00000593089 GH1P01241 217 aa23.85■■□□□ 1.41
TRIM47-207ENST00000593089 EIF2AK2P19525 551 aaKnown RBP23.85■■□□□ 1.41
TRIM47-207ENST00000593089 RABGGTBP53611 331 aa23.85■■□□□ 1.41
TRIM47-207ENST00000593089 SEC23AQ15436 765 aa23.85■■□□□ 1.41
TRIM47-207ENST00000593089 ARHGEF16Q5VV41 709 aa23.85■■□□□ 1.41
TRIM47-207ENST00000593089 CHST3Q7LGC8 479 aa23.85■■□□□ 1.41
TRIM47-207ENST00000593089 AFG1LQ8WV93 481 aa23.85■■□□□ 1.41
TRIM47-207ENST00000593089 PPM1EQ8WY54 764 aa23.85■■□□□ 1.41
TRIM47-207ENST00000593089 IWS1Q96ST2 819 aa23.85■■□□□ 1.41
TRIM47-207ENST00000593089 SLC28A3Q9HAS3 691 aa23.85■■□□□ 1.41
TRIM47-207ENST00000593089 KLRF2D3W0D1 207 aa23.84■■□□□ 1.41
TRIM47-207ENST00000593089 PFKMP08237 780 aa23.84■■□□□ 1.41
TRIM47-207ENST00000593089 PTPN11Q06124 597 aaPredicted RBP23.84■■□□□ 1.41
TRIM47-207ENST00000593089 AMNQ9BXJ7 453 aa23.84■■□□□ 1.41
TRIM47-207ENST00000593089 NOD1Q9Y239 953 aa23.84■■□□□ 1.41
TRIM47-207ENST00000593089 PRUNE2Q8WUY3 3088 aa23.84■■□□□ 1.41
TRIM47-207ENST00000593089 TANC1Q9C0D5 1861 aa23.83■■□□□ 1.41
TRIM47-207ENST00000593089 MMP3P08254 477 aa23.83■■□□□ 1.41
TRIM47-207ENST00000593089 ARHGAP1Q07960 439 aa23.83■■□□□ 1.41
TRIM47-207ENST00000593089 TRDNQ13061 729 aa23.83■■□□□ 1.41
TRIM47-207ENST00000593089 RETREG2Q8NC44 543 aa23.83■■□□□ 1.41
TRIM47-207ENST00000593089 PXMP2Q9NR77 195 aa23.83■■□□□ 1.41
TRIM47-207ENST00000593089 MAD2L2Q9UI95 211 aa23.83■■□□□ 1.41
TRIM47-207ENST00000593089 MYO9BQ13459 2157 aa23.82■■□□□ 1.4
TRIM47-207ENST00000593089 OPLAHO14841 1288 aa23.81■■□□□ 1.4
TRIM47-207ENST00000593089 PPP1R11O60927 126 aaPredicted RBP23.81■■□□□ 1.4
TRIM47-207ENST00000593089 NR3C2P08235 984 aa23.81■■□□□ 1.4
TRIM47-207ENST00000593089 CYP21A2P08686 494 aa23.81■■□□□ 1.4
TRIM47-207ENST00000593089 MYOGP15173 224 aa23.81■■□□□ 1.4
TRIM47-207ENST00000593089 ATP2A2P16615 1042 aaKnown RBP23.81■■□□□ 1.4
TRIM47-207ENST00000593089 PTH1RQ03431 593 aa23.81■■□□□ 1.4
TRIM47-207ENST00000593089 HOMER1Q86YM7 354 aa23.81■■□□□ 1.4
TRIM47-207ENST00000593089 RUFY2Q8WXA3 655 aa23.81■■□□□ 1.4
TRIM47-207ENST00000593089 PALM3A6NDB9 673 aaPredicted RBP23.8■■□□□ 1.4
TRIM47-207ENST00000593089 PITPNM1O00562 1244 aa23.8■■□□□ 1.4
TRIM47-207ENST00000593089 ZBTB5O15062 677 aa23.8■■□□□ 1.4
TRIM47-207ENST00000593089 EIF3JO75822 258 aaKnown RBP23.8■■□□□ 1.4
TRIM47-207ENST00000593089 IQCF3P0C7M6 154 aa23.8■■□□□ 1.4
TRIM47-207ENST00000593089 CASTP20810 708 aaKnown RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms