RNA–Protein interactions for RNA: ENST00000592883.5

RFX2-223, Transcript of regulatory factor X2, human

TSL 4

Gene RFX2, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-223	ENST00000592883	SLC4A7	Q9Y6M7	1214 aa		18.09	■□□□□ 0.49
RFX2-223	ENST00000592883	CHD7	Q9P2D1	2997 aa		18.09	■□□□□ 0.49
RFX2-223	ENST00000592883	NKRF	O15226	690 aa	Known RBP eCLIP	18.08	■□□□□ 0.48
RFX2-223	ENST00000592883	ARIH2	O95376	493 aa		18.08	■□□□□ 0.48
RFX2-223	ENST00000592883	TXN	P10599	105 aa	Known RBP	18.08	■□□□□ 0.48
RFX2-223	ENST00000592883	MFAP1	P55081	439 aa	Known RBP	18.08	■□□□□ 0.48
RFX2-223	ENST00000592883	TTLL4	Q14679	1199 aa		18.08	■□□□□ 0.48
RFX2-223	ENST00000592883	GPATCH4	Q5T3I0	446 aa	Known RBP	18.08	■□□□□ 0.48
RFX2-223	ENST00000592883	DGKH	Q86XP1	1220 aa		18.08	■□□□□ 0.48
RFX2-223	ENST00000592883	SMC5	Q8IY18	1101 aa		18.08	■□□□□ 0.48
RFX2-223	ENST00000592883	TBC1D5	Q92609	795 aa		18.08	■□□□□ 0.48
RFX2-223	ENST00000592883	MPHOSPH6	Q99547	160 aa	Known RBP	18.08	■□□□□ 0.48
RFX2-223	ENST00000592883	RAD50	Q92878	1312 aa		18.07	■□□□□ 0.48
RFX2-223	ENST00000592883		A6NJR5	290 aa		18.07	■□□□□ 0.48
RFX2-223	ENST00000592883	ZNF213	O14771	459 aa		18.07	■□□□□ 0.48
RFX2-223	ENST00000592883	KDM4A	O75164	1064 aa		18.07	■□□□□ 0.48
RFX2-223	ENST00000592883	CDC37	Q16543	378 aa	Predicted RBP	18.07	■□□□□ 0.48
RFX2-223	ENST00000592883	BRDT	Q58F21	947 aa	Predicted RBP	18.07	■□□□□ 0.48
RFX2-223	ENST00000592883	CWC27	Q6UX04	472 aa	Known RBP	18.07	■□□□□ 0.48
RFX2-223	ENST00000592883	PLEKHM2	Q8IWE5	1019 aa		18.07	■□□□□ 0.48
RFX2-223	ENST00000592883	PNMA1	Q8ND90	353 aa		18.07	■□□□□ 0.48
RFX2-223	ENST00000592883	REV3L	O60673	3130 aa		18.07	■□□□□ 0.48
RFX2-223	ENST00000592883	TCF20	Q9UGU0	1960 aa	Known RBP	18.06	■□□□□ 0.48
RFX2-223	ENST00000592883		B4E1Z4	1266 aa		18.06	■□□□□ 0.48
RFX2-223	ENST00000592883	ATP2A2	P16615	1042 aa	Known RBP	18.06	■□□□□ 0.48
RFX2-223	ENST00000592883	PPP2R2D	Q66LE6	453 aa		18.06	■□□□□ 0.48
RFX2-223	ENST00000592883	RGS22	Q8NE09	1264 aa		18.06	■□□□□ 0.48
RFX2-223	ENST00000592883	COL20A1	Q9P218	1284 aa		18.06	■□□□□ 0.48
RFX2-223	ENST00000592883	PCDHA11	Q9Y5I1	949 aa		18.06	■□□□□ 0.48
RFX2-223	ENST00000592883		B4DLN1	442 aa		18.05	■□□□□ 0.48
RFX2-223	ENST00000592883	IGHD	P01880	384 aa		18.05	■□□□□ 0.48
RFX2-223	ENST00000592883	PFKM	P08237	780 aa		18.05	■□□□□ 0.48
RFX2-223	ENST00000592883	MRPL12	P52815	198 aa	Known RBP	18.05	■□□□□ 0.48
RFX2-223	ENST00000592883	NFRKB	Q6P4R8	1299 aa		18.05	■□□□□ 0.48
RFX2-223	ENST00000592883	CHD1L	Q86WJ1	897 aa		18.05	■□□□□ 0.48
RFX2-223	ENST00000592883	IQCA1	Q86XH1	822 aa		18.05	■□□□□ 0.48
RFX2-223	ENST00000592883	ADGRF4	Q8IZF3	695 aa		18.05	■□□□□ 0.48
RFX2-223	ENST00000592883	TAAR1	Q96RJ0	339 aa		18.05	■□□□□ 0.48
RFX2-223	ENST00000592883	RWDD1	Q9H446	243 aa	Predicted RBP	18.05	■□□□□ 0.48
RFX2-223	ENST00000592883	OSBPL3	Q9H4L5	887 aa		18.05	■□□□□ 0.48
RFX2-223	ENST00000592883	KAT14	Q9H8E8	782 aa		18.05	■□□□□ 0.48
RFX2-223	ENST00000592883	THEG	Q9P2T0	379 aa		18.05	■□□□□ 0.48
RFX2-223	ENST00000592883	ABCB11	O95342	1321 aa		18.04	■□□□□ 0.48
RFX2-223	ENST00000592883	KPNA6	O60684	536 aa		18.04	■□□□□ 0.48
RFX2-223	ENST00000592883	IQCF3	P0C7M6	154 aa		18.04	■□□□□ 0.48
RFX2-223	ENST00000592883	CHMP4BP1	P59074	171 aa		18.04	■□□□□ 0.48
RFX2-223	ENST00000592883	LY6K	Q17RY6	165 aa		18.04	■□□□□ 0.48
RFX2-223	ENST00000592883	CCDC62	Q6P9F0	684 aa		18.04	■□□□□ 0.48
RFX2-223	ENST00000592883	SEPT14	Q6ZU15	432 aa		18.04	■□□□□ 0.48
RFX2-223	ENST00000592883	SYTL5	Q8TDW5	730 aa	Predicted RBP	18.04	■□□□□ 0.48
RFX2-223	ENST00000592883	ATXN2L	Q8WWM7	1075 aa	Known RBP	18.04	■□□□□ 0.48
RFX2-223	ENST00000592883	ANKS1A	Q92625	1134 aa		18.04	■□□□□ 0.48
RFX2-223	ENST00000592883	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	18.04	■□□□□ 0.48
RFX2-223	ENST00000592883	DIAPH3	Q9NSV4	1193 aa		18.04	■□□□□ 0.48
RFX2-223	ENST00000592883	MMP3	P08254	477 aa		18.03	■□□□□ 0.48
RFX2-223	ENST00000592883	NUCB1	Q02818	461 aa		18.03	■□□□□ 0.48
RFX2-223	ENST00000592883	PTPN11	Q06124	597 aa	Predicted RBP	18.03	■□□□□ 0.48
RFX2-223	ENST00000592883	QRICH1	Q2TAL8	776 aa		18.03	■□□□□ 0.48
RFX2-223	ENST00000592883	CCDC178	Q5BJE1	867 aa		18.03	■□□□□ 0.48
RFX2-223	ENST00000592883	ENAH	Q8N8S7	591 aa	Predicted RBP	18.03	■□□□□ 0.48
RFX2-223	ENST00000592883	AFG1L	Q8WV93	481 aa		18.03	■□□□□ 0.48
RFX2-223	ENST00000592883	VAT1L	Q9HCJ6	419 aa		18.03	■□□□□ 0.48
RFX2-223	ENST00000592883	ZSWIM5	Q9P217	1185 aa		18.03	■□□□□ 0.48
RFX2-223	ENST00000592883	TTC28	Q96AY4	2481 aa		18.03	■□□□□ 0.48
RFX2-223	ENST00000592883	TNFRSF10A	O00220	468 aa		18.02	■□□□□ 0.48
RFX2-223	ENST00000592883	PITPNM1	O00562	1244 aa		18.02	■□□□□ 0.48
RFX2-223	ENST00000592883	CA3	P07451	260 aa		18.02	■□□□□ 0.48
RFX2-223	ENST00000592883	ACTN1	P12814	892 aa		18.02	■□□□□ 0.48
RFX2-223	ENST00000592883	RFC2	P35250	354 aa		18.02	■□□□□ 0.48
RFX2-223	ENST00000592883	ARHGAP1	Q07960	439 aa		18.02	■□□□□ 0.48
RFX2-223	ENST00000592883	ASPRV1	Q53RT3	343 aa		18.02	■□□□□ 0.48
RFX2-223	ENST00000592883	TMEM67	Q5HYA8	995 aa		18.02	■□□□□ 0.48
RFX2-223	ENST00000592883	CHST3	Q7LGC8	479 aa		18.02	■□□□□ 0.48
RFX2-223	ENST00000592883	MICALL1	Q8N3F8	863 aa		18.02	■□□□□ 0.48
RFX2-223	ENST00000592883	RETREG2	Q8NC44	543 aa		18.02	■□□□□ 0.48
RFX2-223	ENST00000592883	NSUN6	Q8TEA1	469 aa	Known RBP	18.02	■□□□□ 0.48
RFX2-223	ENST00000592883	ASB2	Q96Q27	587 aa		18.02	■□□□□ 0.48
RFX2-223	ENST00000592883	NOD1	Q9Y239	953 aa		18.02	■□□□□ 0.48
RFX2-223	ENST00000592883	RFXAP	O00287	272 aa		18.01	■□□□□ 0.47
RFX2-223	ENST00000592883	DHX16	O60231	1041 aa	Known RBP	18.01	■□□□□ 0.47
RFX2-223	ENST00000592883	GH1	P01241	217 aa		18.01	■□□□□ 0.47
RFX2-223	ENST00000592883	PARP1	P09874	1014 aa	Known RBP	18.01	■□□□□ 0.47
RFX2-223	ENST00000592883	NT5C2	P49902	561 aa		18.01	■□□□□ 0.47
RFX2-223	ENST00000592883	BFSP2	Q13515	415 aa		18.01	■□□□□ 0.47
RFX2-223	ENST00000592883	AAMP	Q13685	434 aa		18.01	■□□□□ 0.47
RFX2-223	ENST00000592883	PTGIS	Q16647	500 aa		18.01	■□□□□ 0.47
RFX2-223	ENST00000592883	FBXO11	Q86XK2	927 aa		18.01	■□□□□ 0.47
RFX2-223	ENST00000592883	KAT2B	Q92831	832 aa		18.01	■□□□□ 0.47
RFX2-223	ENST00000592883	RMDN3	Q96TC7	470 aa		18.01	■□□□□ 0.47
RFX2-223	ENST00000592883	DSCC1	Q9BVC3	393 aa		18.01	■□□□□ 0.47
RFX2-223	ENST00000592883	FTO	Q9C0B1	505 aa	Known RBP eCLIP	18.01	■□□□□ 0.47
RFX2-223	ENST00000592883	JMJD4	Q9H9V9	463 aa		18.01	■□□□□ 0.47
RFX2-223	ENST00000592883	CERS4	Q9HA82	394 aa		18.01	■□□□□ 0.47
RFX2-223	ENST00000592883	COL4A4	P53420	1690 aa	Predicted RBP	18.01	■□□□□ 0.47
RFX2-223	ENST00000592883	TRANK1	O15050	2925 aa		18.01	■□□□□ 0.47
RFX2-223	ENST00000592883	MUC3A	Q02505	3323 aa		18	■□□□□ 0.47
RFX2-223	ENST00000592883	EIF2AK2	P19525	551 aa	Known RBP	18	■□□□□ 0.47
RFX2-223	ENST00000592883	MRPS5	P82675	430 aa	Known RBP	18	■□□□□ 0.47
RFX2-223	ENST00000592883	STXBP2	Q15833	593 aa		18	■□□□□ 0.47
RFX2-223	ENST00000592883	IMMT	Q16891	758 aa	Known RBP	18	■□□□□ 0.47

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms