RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 PWP2Q15269 919 aaKnown RBP11.43□□□□□ -0.58
TPM4-216ENST00000592822 FCHSD1Q86WN1 690 aa11.43□□□□□ -0.58
TPM4-216ENST00000592822 SMARCC2Q8TAQ2 1214 aa11.43□□□□□ -0.58
TPM4-216ENST00000592822 NSUN6Q8TEA1 469 aaKnown RBP11.43□□□□□ -0.58
TPM4-216ENST00000592822 CUL5Q93034 780 aa11.43□□□□□ -0.58
TPM4-216ENST00000592822 LLPHQ9BRT6 129 aaKnown RBP11.43□□□□□ -0.58
TPM4-216ENST00000592822 KATNBL1Q9H079 304 aa11.43□□□□□ -0.58
TPM4-216ENST00000592822 ZMYND12Q9H0C1 365 aa11.43□□□□□ -0.58
TPM4-216ENST00000592822 HMX1Q9NP08 348 aaPredicted RBP11.43□□□□□ -0.58
TPM4-216ENST00000592822 SH3GLB2Q9NR46 395 aa11.43□□□□□ -0.58
TPM4-216ENST00000592822 PXMP2Q9NR77 195 aa11.43□□□□□ -0.58
TPM4-216ENST00000592822 FRMPD4Q14CM0 1322 aa11.42□□□□□ -0.58
TPM4-216ENST00000592822 BRCA2P51587 3418 aa11.42□□□□□ -0.58
TPM4-216ENST00000592822 ZNF865P0CJ78 1059 aaPredicted RBP11.42□□□□□ -0.58
TPM4-216ENST00000592822 ARHGEF16Q5VV41 709 aa11.42□□□□□ -0.58
TPM4-216ENST00000592822 IL31RAQ8NI17 732 aa11.42□□□□□ -0.58
TPM4-216ENST00000592822 CCDC12Q8WUD4 166 aaPredicted RBP11.42□□□□□ -0.58
TPM4-216ENST00000592822 IWS1Q96ST2 819 aa11.42□□□□□ -0.58
TPM4-216ENST00000592822 PDCD2LQ9BRP1 358 aa11.42□□□□□ -0.58
TPM4-216ENST00000592822 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.42□□□□□ -0.58
TPM4-216ENST00000592822 RNF208Q9H0X6 261 aa11.42□□□□□ -0.58
TPM4-216ENST00000592822 PAK6Q9NQU5 681 aaPredicted RBP11.42□□□□□ -0.58
TPM4-216ENST00000592822 GJB4Q9NTQ9 266 aa11.42□□□□□ -0.58
TPM4-216ENST00000592822 TMEM260Q9NX78 707 aa11.42□□□□□ -0.58
TPM4-216ENST00000592822 NRBP1Q9UHY1 535 aa11.42□□□□□ -0.58
TPM4-216ENST00000592822 CNPY2Q9Y2B0 182 aa11.42□□□□□ -0.58
TPM4-216ENST00000592822 NR3C2P08235 984 aa11.41□□□□□ -0.58
TPM4-216ENST00000592822 EIF2AK2P19525 551 aaKnown RBP11.41□□□□□ -0.58
TPM4-216ENST00000592822 CNGA1P29973 690 aa11.41□□□□□ -0.58
TPM4-216ENST00000592822 CLK2P49760 499 aaKnown RBP11.41□□□□□ -0.58
TPM4-216ENST00000592822 PDE4DQ08499 809 aa11.41□□□□□ -0.58
TPM4-216ENST00000592822 ACVR2BQ13705 512 aa11.41□□□□□ -0.58
TPM4-216ENST00000592822 EEPD1Q7L9B9 569 aa11.41□□□□□ -0.58
TPM4-216ENST00000592822 TEX2Q8IWB9 1127 aa11.41□□□□□ -0.58
TPM4-216ENST00000592822 PIAS4Q8N2W9 510 aaPredicted RBP11.41□□□□□ -0.58
TPM4-216ENST00000592822 CCDC148Q8NFR7 591 aa11.41□□□□□ -0.58
TPM4-216ENST00000592822 WASF1Q92558 559 aa11.41□□□□□ -0.58
TPM4-216ENST00000592822 ALG1Q9BT22 464 aa11.41□□□□□ -0.58
TPM4-216ENST00000592822 GLT8D2Q9H1C3 349 aa11.41□□□□□ -0.58
TPM4-216ENST00000592822 ABHD16BQ9H3Z7 469 aa11.41□□□□□ -0.58
TPM4-216ENST00000592822 C6orf50Q9HD87 102 aa11.41□□□□□ -0.58
TPM4-216ENST00000592822 KIAA0100Q14667 2235 aaKnown RBP11.41□□□□□ -0.58
TPM4-216ENST00000592822 FRMPD3Q5JV73 1810 aa11.41□□□□□ -0.58
TPM4-216ENST00000592822 KIAA1217Q5T5P2 1943 aa11.41□□□□□ -0.58
TPM4-216ENST00000592822 CCDC85CA6NKD9 419 aa11.4□□□□□ -0.58
TPM4-216ENST00000592822 SEPT4O43236 478 aa11.4□□□□□ -0.58
TPM4-216ENST00000592822 GJB1P08034 283 aa11.4□□□□□ -0.58
TPM4-216ENST00000592822 NLRP5P59047 1200 aa11.4□□□□□ -0.58
TPM4-216ENST00000592822 PGM5Q15124 567 aa11.4□□□□□ -0.58
TPM4-216ENST00000592822 NPY5RQ15761 445 aa11.4□□□□□ -0.58
TPM4-216ENST00000592822 CCDC144BQ3MJ40 725 aa11.4□□□□□ -0.58
TPM4-216ENST00000592822 LHX8Q68G74 356 aa11.4□□□□□ -0.58
TPM4-216ENST00000592822 TAPT1Q6NXT6 567 aa11.4□□□□□ -0.58
TPM4-216ENST00000592822 VSIG10LQ86VR7 867 aa11.4□□□□□ -0.58
TPM4-216ENST00000592822 FBXO16Q8IX29 292 aaPredicted RBP11.4□□□□□ -0.58
TPM4-216ENST00000592822 FAM177A1Q8N128 213 aaPredicted RBP11.4□□□□□ -0.58
TPM4-216ENST00000592822 SNX21Q969T3 373 aa11.4□□□□□ -0.58
TPM4-216ENST00000592822 PGBD1Q96JS3 809 aa11.4□□□□□ -0.58
TPM4-216ENST00000592822 DEFB118Q96PH6 123 aa11.4□□□□□ -0.58
TPM4-216ENST00000592822 MPHOSPH6Q99547 160 aaKnown RBP11.4□□□□□ -0.58
TPM4-216ENST00000592822 PHF20Q9BVI0 1012 aa11.4□□□□□ -0.58
TPM4-216ENST00000592822 TMEM106CQ9BVX2 250 aa11.4□□□□□ -0.58
TPM4-216ENST00000592822 VTA1Q9NP79 307 aa11.4□□□□□ -0.58
TPM4-216ENST00000592822 PDGFCQ9NRA1 345 aa11.4□□□□□ -0.58
TPM4-216ENST00000592822 ZHX1Q9UKY1 873 aaPredicted RBP11.4□□□□□ -0.58
TPM4-216ENST00000592822 PCDHA6Q9UN73 950 aa11.4□□□□□ -0.58
TPM4-216ENST00000592822 PCDHA4Q9UN74 947 aa11.4□□□□□ -0.58
TPM4-216ENST00000592822 KCNJ14Q9UNX9 436 aa11.4□□□□□ -0.58
TPM4-216ENST00000592822 PCDHA8Q9Y5H6 950 aa11.4□□□□□ -0.58
TPM4-216ENST00000592822 RBM47A0AV96 593 aaKnown RBP11.39□□□□□ -0.59
TPM4-216ENST00000592822 POTEFA5A3E0 1075 aa11.39□□□□□ -0.59
TPM4-216ENST00000592822 SPDYE3A6NKU9 549 aa11.39□□□□□ -0.59
TPM4-216ENST00000592822 B4DLN1 442 aa11.39□□□□□ -0.59
TPM4-216ENST00000592822 ADCY6O43306 1168 aa11.39□□□□□ -0.59
TPM4-216ENST00000592822 EIF3JO75822 258 aaKnown RBP11.39□□□□□ -0.59
TPM4-216ENST00000592822 FOSP01100 380 aaPredicted RBP11.39□□□□□ -0.59
TPM4-216ENST00000592822 MYCLP12524 364 aaPredicted RBP11.39□□□□□ -0.59
TPM4-216ENST00000592822 GNA11P29992 359 aa11.39□□□□□ -0.59
TPM4-216ENST00000592822 ADCYAP1R1P41586 468 aa11.39□□□□□ -0.59
TPM4-216ENST00000592822 MRPS9P82933 396 aaKnown RBP11.39□□□□□ -0.59
TPM4-216ENST00000592822 AP3B2Q13367 1082 aa11.39□□□□□ -0.59
TPM4-216ENST00000592822 CUL4AQ13619 759 aa11.39□□□□□ -0.59
TPM4-216ENST00000592822 STXBP2Q15833 593 aa11.39□□□□□ -0.59
TPM4-216ENST00000592822 TMEM63BQ5T3F8 832 aa11.39□□□□□ -0.59
TPM4-216ENST00000592822 JAKMIP3Q5VZ66 844 aa11.39□□□□□ -0.59
TPM4-216ENST00000592822 ANO1Q5XXA6 986 aa11.39□□□□□ -0.59
TPM4-216ENST00000592822 GALNT17Q6IS24 598 aa11.39□□□□□ -0.59
TPM4-216ENST00000592822 REXO1Q8N1G1 1221 aaKnown RBP11.39□□□□□ -0.59
TPM4-216ENST00000592822 DAGLBQ8NCG7 672 aa11.39□□□□□ -0.59
TPM4-216ENST00000592822 RASGRP4Q8TDF6 673 aa11.39□□□□□ -0.59
TPM4-216ENST00000592822 LENG1Q96BZ8 264 aaPredicted RBP11.39□□□□□ -0.59
TPM4-216ENST00000592822 ZFP91Q96JP5 570 aaPredicted RBP11.39□□□□□ -0.59
TPM4-216ENST00000592822 CRISPLD2Q9H0B8 497 aa11.39□□□□□ -0.59
TPM4-216ENST00000592822 DDX20Q9UHI6 824 aaKnown RBP11.39□□□□□ -0.59
TPM4-216ENST00000592822 MYH7BA7E2Y1 1941 aa11.39□□□□□ -0.59
TPM4-216ENST00000592822 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.38□□□□□ -0.59
TPM4-216ENST00000592822 K7ELQ4 463 aaPredicted RBP11.38□□□□□ -0.59
TPM4-216ENST00000592822 M0R2N6 131 aa11.38□□□□□ -0.59
TPM4-216ENST00000592822 RGS20O76081 388 aa11.38□□□□□ -0.59
TPM4-216ENST00000592822 SGPL1O95470 568 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms