RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 KCNA10Q16322 511 aa16.78■□□□□ 0.28
DDX39A-217ENST00000592391 ARHGEF16Q5VV41 709 aa16.78■□□□□ 0.28
DDX39A-217ENST00000592391 SLC39A5Q6ZMH5 540 aa16.78■□□□□ 0.28
DDX39A-217ENST00000592391 TLK2Q86UE8 772 aa16.78■□□□□ 0.28
DDX39A-217ENST00000592391 CCDC82Q8N4S0 544 aa16.78■□□□□ 0.28
DDX39A-217ENST00000592391 BRF1Q92994 677 aa16.78■□□□□ 0.28
DDX39A-217ENST00000592391 AGXT2Q9BYV1 514 aa16.78■□□□□ 0.28
DDX39A-217ENST00000592391 WDR11Q9BZH6 1224 aa16.78■□□□□ 0.28
DDX39A-217ENST00000592391 ZSWIM6Q9HCJ5 1215 aa16.78■□□□□ 0.28
DDX39A-217ENST00000592391 PXMP2Q9NR77 195 aa16.78■□□□□ 0.28
DDX39A-217ENST00000592391 Q9Y3F1 56 aa16.78■□□□□ 0.28
DDX39A-217ENST00000592391 CTAGE5O15320 804 aa16.77■□□□□ 0.28
DDX39A-217ENST00000592391 EIF2AK2P19525 551 aaKnown RBP16.77■□□□□ 0.28
DDX39A-217ENST00000592391 APOBRQ0VD83 1088 aa16.77■□□□□ 0.28
DDX39A-217ENST00000592391 SNX17Q15036 470 aa16.77■□□□□ 0.28
DDX39A-217ENST00000592391 PPP2R5BQ15173 497 aa16.77■□□□□ 0.28
DDX39A-217ENST00000592391 DUSP28Q4G0W2 176 aa16.77■□□□□ 0.28
DDX39A-217ENST00000592391 GNASQ5JWF2 1037 aa16.77■□□□□ 0.28
DDX39A-217ENST00000592391 TMEM63BQ5T3F8 832 aa16.77■□□□□ 0.28
DDX39A-217ENST00000592391 RUFY3Q7L099 469 aa16.77■□□□□ 0.28
DDX39A-217ENST00000592391 PCSK9Q8NBP7 692 aaKnown RBP16.77■□□□□ 0.28
DDX39A-217ENST00000592391 SCFD2Q8WU76 684 aa16.77■□□□□ 0.28
DDX39A-217ENST00000592391 TM6SF1Q9BZW5 370 aa16.77■□□□□ 0.28
DDX39A-217ENST00000592391 AP5M1Q9H0R1 490 aa16.77■□□□□ 0.28
DDX39A-217ENST00000592391 FAM217BQ9NTX9 383 aaPredicted RBP16.77■□□□□ 0.28
DDX39A-217ENST00000592391 NAP1L2Q9ULW6 460 aaPredicted RBP16.77■□□□□ 0.28
DDX39A-217ENST00000592391 CNTNAP5Q8WYK1 1306 aa16.76■□□□□ 0.27
DDX39A-217ENST00000592391 A0A1W2PQ45 241 aaPredicted RBP16.76■□□□□ 0.27
DDX39A-217ENST00000592391 A0A1W2PQY0 241 aa16.76■□□□□ 0.27
DDX39A-217ENST00000592391 DYNC1LI2O43237 492 aaPredicted RBP16.76■□□□□ 0.27
DDX39A-217ENST00000592391 EIF5BO60841 1220 aaKnown RBP16.76■□□□□ 0.27
DDX39A-217ENST00000592391 PTGS1P23219 599 aa16.76■□□□□ 0.27
DDX39A-217ENST00000592391 CDC27P30260 824 aa16.76■□□□□ 0.27
DDX39A-217ENST00000592391 RTP1P59025 263 aa16.76■□□□□ 0.27
DDX39A-217ENST00000592391 FUT2Q10981 343 aa16.76■□□□□ 0.27
DDX39A-217ENST00000592391 STXBP2Q15833 593 aa16.76■□□□□ 0.27
DDX39A-217ENST00000592391 C1orf53Q5VUE5 145 aa16.76■□□□□ 0.27
DDX39A-217ENST00000592391 CYP46A1Q9Y6A2 500 aa16.76■□□□□ 0.27
DDX39A-217ENST00000592391 CEP290O15078 2479 aa16.76■□□□□ 0.27
DDX39A-217ENST00000592391 CCDC196A0A1B0GTZ2 297 aa16.75■□□□□ 0.27
DDX39A-217ENST00000592391 hCG_1642624A0A1W2PR95 340 aa16.75■□□□□ 0.27
DDX39A-217ENST00000592391 ASGR1P07306 291 aa16.75■□□□□ 0.27
DDX39A-217ENST00000592391 NR3C2P08235 984 aa16.75■□□□□ 0.27
DDX39A-217ENST00000592391 METAP2P50579 478 aaKnown RBP eCLIP16.75■□□□□ 0.27
DDX39A-217ENST00000592391 BEX3Q00994 111 aa16.75■□□□□ 0.27
DDX39A-217ENST00000592391 FSCN1Q16658 493 aaKnown RBP16.75■□□□□ 0.27
DDX39A-217ENST00000592391 PDCD2LQ9BRP1 358 aa16.75■□□□□ 0.27
DDX39A-217ENST00000592391 ATP11BQ9Y2G3 1177 aa16.75■□□□□ 0.27
DDX39A-217ENST00000592391 NID2Q14112 1375 aa16.75■□□□□ 0.27
DDX39A-217ENST00000592391 DNAH12Q6ZR08 3092 aa16.74■□□□□ 0.27
DDX39A-217ENST00000592391 PIK3CDO00329 1044 aa16.74■□□□□ 0.27
DDX39A-217ENST00000592391 NKRFO15226 690 aaKnown RBP eCLIP16.74■□□□□ 0.27
DDX39A-217ENST00000592391 EIF3JO75822 258 aaKnown RBP16.74■□□□□ 0.27
DDX39A-217ENST00000592391 ADD1P35611 737 aaKnown RBP16.74■□□□□ 0.27
DDX39A-217ENST00000592391 EVCP57679 992 aa16.74■□□□□ 0.27
DDX39A-217ENST00000592391 TTLL4Q14679 1199 aa16.74■□□□□ 0.27
DDX39A-217ENST00000592391 TRIM60Q495X7 471 aa16.74■□□□□ 0.27
DDX39A-217ENST00000592391 FCHSD1Q86WN1 690 aa16.74■□□□□ 0.27
DDX39A-217ENST00000592391 GLT1D1Q96MS3 346 aa16.74■□□□□ 0.27
DDX39A-217ENST00000592391 UPF3BQ9BZI7 483 aaKnown RBP16.74■□□□□ 0.27
DDX39A-217ENST00000592391 STARD7Q9NQZ5 370 aa16.74■□□□□ 0.27
DDX39A-217ENST00000592391 ZMYND8Q9ULU4 1186 aaPredicted RBP16.74■□□□□ 0.27
DDX39A-217ENST00000592391 ELP1O95163 1332 aa16.73■□□□□ 0.27
DDX39A-217ENST00000592391 MEIS2O14770 477 aa16.73■□□□□ 0.27
DDX39A-217ENST00000592391 ZEB2O60315 1214 aa16.73■□□□□ 0.27
DDX39A-217ENST00000592391 TXNP10599 105 aaKnown RBP16.73■□□□□ 0.27
DDX39A-217ENST00000592391 SYN1P17600 705 aa16.73■□□□□ 0.27
DDX39A-217ENST00000592391 ANAPC15P60006 121 aa16.73■□□□□ 0.27
DDX39A-217ENST00000592391 TOB2Q14106 344 aaPredicted RBP16.73■□□□□ 0.27
DDX39A-217ENST00000592391 PGM5Q15124 567 aa16.73■□□□□ 0.27
DDX39A-217ENST00000592391 CCDC62Q6P9F0 684 aa16.73■□□□□ 0.27
DDX39A-217ENST00000592391 SEPT14Q6ZU15 432 aa16.73■□□□□ 0.27
DDX39A-217ENST00000592391 HEATR3Q7Z4Q2 680 aa16.73■□□□□ 0.27
DDX39A-217ENST00000592391 VSIG10LQ86VR7 867 aa16.73■□□□□ 0.27
DDX39A-217ENST00000592391 OR6J1Q8NGC5 347 aa16.73■□□□□ 0.27
DDX39A-217ENST00000592391 CUL5Q93034 780 aa16.73■□□□□ 0.27
DDX39A-217ENST00000592391 PSTPIP2Q9H939 334 aa16.73■□□□□ 0.27
DDX39A-217ENST00000592391 V9GY48 417 aaPredicted RBP16.73■□□□□ 0.27
DDX39A-217ENST00000592391 FRMPD4Q14CM0 1322 aa16.72■□□□□ 0.27
DDX39A-217ENST00000592391 CABYRO75952 493 aa16.72■□□□□ 0.27
DDX39A-217ENST00000592391 ARIH2O95376 493 aa16.72■□□□□ 0.27
DDX39A-217ENST00000592391 MYCLP12524 364 aaPredicted RBP16.72■□□□□ 0.27
DDX39A-217ENST00000592391 CCND2P30279 289 aa16.72■□□□□ 0.27
DDX39A-217ENST00000592391 CPT1AP50416 773 aa16.72■□□□□ 0.27
DDX39A-217ENST00000592391 WWC2Q6AWC2 1192 aa16.72■□□□□ 0.27
DDX39A-217ENST00000592391 USP17L6PQ6QN14 398 aa16.72■□□□□ 0.27
DDX39A-217ENST00000592391 CHRDL2Q6WN34 429 aa16.72■□□□□ 0.27
DDX39A-217ENST00000592391 IL31RAQ8NI17 732 aa16.72■□□□□ 0.27
DDX39A-217ENST00000592391 SMARCC2Q8TAQ2 1214 aa16.72■□□□□ 0.27
DDX39A-217ENST00000592391 GPKOWQ92917 476 aaPredicted RBP eCLIP16.72■□□□□ 0.27
DDX39A-217ENST00000592391 COLQQ9Y215 455 aaPredicted RBP16.72■□□□□ 0.27
DDX39A-217ENST00000592391 hCG_1984214I3L0E3 225 aa16.71■□□□□ 0.27
DDX39A-217ENST00000592391 PDIA3P30101 505 aaKnown RBP16.71■□□□□ 0.27
DDX39A-217ENST00000592391 TLE2Q04725 743 aa16.71■□□□□ 0.27
DDX39A-217ENST00000592391 PPP1R18Q6NYC8 613 aa16.71■□□□□ 0.27
DDX39A-217ENST00000592391 CXCL17Q6UXB2 119 aa16.71■□□□□ 0.27
DDX39A-217ENST00000592391 ZNF713Q8N859 430 aaPredicted RBP16.71■□□□□ 0.27
DDX39A-217ENST00000592391 COPS5Q92905 334 aa16.71■□□□□ 0.27
DDX39A-217ENST00000592391 PDRG1Q9NUG6 133 aa16.71■□□□□ 0.27
DDX39A-217ENST00000592391 A0A0U1RQG5 324 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms