RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 MRPL11Q9Y3B7 192 aaKnown RBP22.03■■□□□ 1.12
CCDC43-205ENST00000592333 FOSL2P15408 326 aa22.02■■□□□ 1.12
CCDC43-205ENST00000592333 PSMC6P62333 389 aa22.02■■□□□ 1.12
CCDC43-205ENST00000592333 RAB30Q15771 203 aa22.02■■□□□ 1.12
CCDC43-205ENST00000592333 USH1GQ495M9 461 aa22.02■■□□□ 1.12
CCDC43-205ENST00000592333 MYLIPQ8WY64 445 aa22.02■■□□□ 1.12
CCDC43-205ENST00000592333 TRPV6Q9H1D0 765 aa22.02■■□□□ 1.12
CCDC43-205ENST00000592333 CDH23Q9H251 3354 aa22.01■■□□□ 1.11
CCDC43-205ENST00000592333 TXNP10599 105 aaKnown RBP22.01■■□□□ 1.11
CCDC43-205ENST00000592333 GHRHRQ02643 423 aa22.01■■□□□ 1.11
CCDC43-205ENST00000592333 TRAF1Q13077 416 aa22.01■■□□□ 1.11
CCDC43-205ENST00000592333 IFIT1BQ5T764 474 aaKnown RBP22.01■■□□□ 1.11
CCDC43-205ENST00000592333 FBXO11Q86XK2 927 aa22.01■■□□□ 1.11
CCDC43-205ENST00000592333 ACRP10323 421 aa22■■□□□ 1.11
CCDC43-205ENST00000592333 PTGS1P23219 599 aa22■■□□□ 1.11
CCDC43-205ENST00000592333 TRDNQ13061 729 aa22■■□□□ 1.11
CCDC43-205ENST00000592333 TTC22Q5TAA0 569 aa22■■□□□ 1.11
CCDC43-205ENST00000592333 CCDC62Q6P9F0 684 aa22■■□□□ 1.11
CCDC43-205ENST00000592333 SYTL5Q8TDW5 730 aaPredicted RBP22■■□□□ 1.11
CCDC43-205ENST00000592333 PBX4Q9BYU1 374 aa22■■□□□ 1.11
CCDC43-205ENST00000592333 JMJD4Q9H9V9 463 aa22■■□□□ 1.11
CCDC43-205ENST00000592333 MSRAQ9UJ68 235 aa22■■□□□ 1.11
CCDC43-205ENST00000592333 PITPNM1O00562 1244 aa21.99■■□□□ 1.11
CCDC43-205ENST00000592333 MYL3P08590 195 aa21.99■■□□□ 1.11
CCDC43-205ENST00000592333 RFC2P35250 354 aa21.99■■□□□ 1.11
CCDC43-205ENST00000592333 GRIN2CQ14957 1233 aa21.99■■□□□ 1.11
CCDC43-205ENST00000592333 STXBP2Q15833 593 aa21.99■■□□□ 1.11
CCDC43-205ENST00000592333 QRICH1Q2TAL8 776 aa21.99■■□□□ 1.11
CCDC43-205ENST00000592333 AMNQ9BXJ7 453 aa21.99■■□□□ 1.11
CCDC43-205ENST00000592333 WNT8AQ9H1J5 351 aa21.99■■□□□ 1.11
CCDC43-205ENST00000592333 U3KPZ7 1027 aaPredicted RBP21.99■■□□□ 1.11
CCDC43-205ENST00000592333 SCN10AQ9Y5Y9 1956 aa21.99■■□□□ 1.11
CCDC43-205ENST00000592333 SEC23AQ15436 765 aa21.98■■□□□ 1.11
CCDC43-205ENST00000592333 MTMR8Q96EF0 704 aa21.98■■□□□ 1.11
CCDC43-205ENST00000592333 RMDN3Q96TC7 470 aa21.98■■□□□ 1.11
CCDC43-205ENST00000592333 CPVLQ9H3G5 476 aa21.98■■□□□ 1.11
CCDC43-205ENST00000592333 DHX16O60231 1041 aaKnown RBP21.97■■□□□ 1.11
CCDC43-205ENST00000592333 EIF3JO75822 258 aaKnown RBP21.97■■□□□ 1.11
CCDC43-205ENST00000592333 GH1P01241 217 aa21.97■■□□□ 1.11
CCDC43-205ENST00000592333 CCL23P55773 120 aa21.97■■□□□ 1.11
CCDC43-205ENST00000592333 NBPF20Q3BBV1 942 aa21.97■■□□□ 1.11
CCDC43-205ENST00000592333 EMID1Q96A84 441 aaPredicted RBP21.97■■□□□ 1.11
CCDC43-205ENST00000592333 TAAR1Q96RJ0 339 aa21.97■■□□□ 1.11
CCDC43-205ENST00000592333 UMODL1Q5DID0 1318 aa21.97■■□□□ 1.11
CCDC43-205ENST00000592333 KLRF2D3W0D1 207 aa21.96■■□□□ 1.11
CCDC43-205ENST00000592333 ZBTB5O15062 677 aa21.96■■□□□ 1.11
CCDC43-205ENST00000592333 GSPT1P15170 499 aaKnown RBP21.96■■□□□ 1.11
CCDC43-205ENST00000592333 HSD17B4P51659 736 aa21.96■■□□□ 1.11
CCDC43-205ENST00000592333 SESTD1Q86VW0 696 aa21.96■■□□□ 1.11
CCDC43-205ENST00000592333 TRMT13Q9NUP7 481 aaKnown RBP21.96■■□□□ 1.11
CCDC43-205ENST00000592333 PALM3A6NDB9 673 aaPredicted RBP21.95■■□□□ 1.1
CCDC43-205ENST00000592333 ARIH2O95376 493 aa21.95■■□□□ 1.1
CCDC43-205ENST00000592333 CASTP20810 708 aaKnown RBP21.95■■□□□ 1.1
CCDC43-205ENST00000592333 PDE4AP27815 886 aa21.95■■□□□ 1.1
CCDC43-205ENST00000592333 BFSP2Q13515 415 aa21.95■■□□□ 1.1
CCDC43-205ENST00000592333 ARHGEF16Q5VV41 709 aa21.95■■□□□ 1.1
CCDC43-205ENST00000592333 KCNV1Q6PIU1 500 aa21.95■■□□□ 1.1
CCDC43-205ENST00000592333 TBC1D5Q92609 795 aa21.95■■□□□ 1.1
CCDC43-205ENST00000592333 GAS2L1Q99501 681 aaPredicted RBP21.95■■□□□ 1.1
CCDC43-205ENST00000592333 COL25A1Q9BXS0 654 aaPredicted RBP21.95■■□□□ 1.1
CCDC43-205ENST00000592333 IL25Q9H293 177 aa21.95■■□□□ 1.1
CCDC43-205ENST00000592333 CXXC1Q9P0U4 656 aaPredicted RBP21.95■■□□□ 1.1
CCDC43-205ENST00000592333 SUPT16HQ9Y5B9 1047 aaKnown RBP21.95■■□□□ 1.1
CCDC43-205ENST00000592333 SLC4A7Q9Y6M7 1214 aa21.95■■□□□ 1.1
CCDC43-205ENST00000592333 ERICH2A1L162 156 aa21.94■■□□□ 1.1
CCDC43-205ENST00000592333 CHMLP26374 656 aa21.94■■□□□ 1.1
CCDC43-205ENST00000592333 SART3Q15020 963 aaKnown RBP21.94■■□□□ 1.1
CCDC43-205ENST00000592333 STOX1Q6ZVD7 989 aa21.94■■□□□ 1.1
CCDC43-205ENST00000592333 OTOP2Q7RTS6 562 aa21.94■■□□□ 1.1
CCDC43-205ENST00000592333 RETREG2Q8NC44 543 aa21.94■■□□□ 1.1
CCDC43-205ENST00000592333 COPS5Q92905 334 aa21.94■■□□□ 1.1
CCDC43-205ENST00000592333 SLC28A3Q9HAS3 691 aa21.94■■□□□ 1.1
CCDC43-205ENST00000592333 VAT1LQ9HCJ6 419 aa21.94■■□□□ 1.1
CCDC43-205ENST00000592333 PXMP2Q9NR77 195 aa21.94■■□□□ 1.1
CCDC43-205ENST00000592333 COL20A1Q9P218 1284 aa21.94■■□□□ 1.1
CCDC43-205ENST00000592333 MAD2L2Q9UI95 211 aa21.94■■□□□ 1.1
CCDC43-205ENST00000592333 EYSQ5T1H1 3165 aa21.93■■□□□ 1.1
CCDC43-205ENST00000592333 PARNO95453 639 aaKnown RBP21.93■■□□□ 1.1
CCDC43-205ENST00000592333 NR3C2P08235 984 aa21.93■■□□□ 1.1
CCDC43-205ENST00000592333 CYP21A2P08686 494 aa21.93■■□□□ 1.1
CCDC43-205ENST00000592333 ACTN1P12814 892 aa21.93■■□□□ 1.1
CCDC43-205ENST00000592333 MYH6P13533 1939 aa21.93■■□□□ 1.1
CCDC43-205ENST00000592333 PBX2P40425 430 aa21.93■■□□□ 1.1
CCDC43-205ENST00000592333 ARHGAP1Q07960 439 aa21.93■■□□□ 1.1
CCDC43-205ENST00000592333 FAM47CQ5HY64 1035 aa21.93■■□□□ 1.1
CCDC43-205ENST00000592333 CYB5R4Q7L1T6 521 aa21.93■■□□□ 1.1
CCDC43-205ENST00000592333 STAG2Q8N3U4 1231 aa21.93■■□□□ 1.1
CCDC43-205ENST00000592333 CCDC155Q8N6L0 562 aa21.93■■□□□ 1.1
CCDC43-205ENST00000592333 VWCEQ96DN2 955 aa21.93■■□□□ 1.1
CCDC43-205ENST00000592333 RIOX1Q9H6W3 641 aa21.93■■□□□ 1.1
CCDC43-205ENST00000592333 DDX41Q9UJV9 622 aaKnown RBP21.93■■□□□ 1.1
CCDC43-205ENST00000592333 PCDHA11Q9Y5I1 949 aa21.93■■□□□ 1.1
CCDC43-205ENST00000592333 GRXCR1A8MXD5 290 aa21.92■■□□□ 1.1
CCDC43-205ENST00000592333 CFBP00751 764 aa21.92■■□□□ 1.1
CCDC43-205ENST00000592333 MMP3P08254 477 aa21.92■■□□□ 1.1
CCDC43-205ENST00000592333 CYP2C9P11712 490 aa21.92■■□□□ 1.1
CCDC43-205ENST00000592333 LAMC2Q13753 1193 aa21.92■■□□□ 1.1
CCDC43-205ENST00000592333 DGKDQ16760 1214 aa21.92■■□□□ 1.1
CCDC43-205ENST00000592333 SEPT14Q6ZU15 432 aa21.92■■□□□ 1.1
CCDC43-205ENST00000592333 NCOA7Q8NI08 942 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms