RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 UBE3CQ15386 1083 aa12.07□□□□□ -0.48
SDF2-209ENST00000591903 NBPF20Q3BBV1 942 aa12.07□□□□□ -0.48
SDF2-209ENST00000591903 SBK1Q52WX2 424 aa12.07□□□□□ -0.48
SDF2-209ENST00000591903 EEPD1Q7L9B9 569 aa12.07□□□□□ -0.48
SDF2-209ENST00000591903 FAM160B2Q86V87 743 aa12.07□□□□□ -0.48
SDF2-209ENST00000591903 NEK9Q8TD19 979 aa12.07□□□□□ -0.48
SDF2-209ENST00000591903 CHURC1Q8WUH1 139 aa12.07□□□□□ -0.48
SDF2-209ENST00000591903 TRERF1Q96PN7 1200 aa12.07□□□□□ -0.48
SDF2-209ENST00000591903 PRRX2Q99811 253 aa12.07□□□□□ -0.48
SDF2-209ENST00000591903 HIP1O00291 1037 aa12.06□□□□□ -0.48
SDF2-209ENST00000591903 NKRFO15226 690 aaKnown RBP eCLIP12.06□□□□□ -0.48
SDF2-209ENST00000591903 GJB5O95377 273 aa12.06□□□□□ -0.48
SDF2-209ENST00000591903 TTLL1O95922 423 aa12.06□□□□□ -0.48
SDF2-209ENST00000591903 BMP3P12645 472 aa12.06□□□□□ -0.48
SDF2-209ENST00000591903 PTGS1P23219 599 aa12.06□□□□□ -0.48
SDF2-209ENST00000591903 PTPROQ16827 1216 aa12.06□□□□□ -0.48
SDF2-209ENST00000591903 CNKSR3Q6P9H4 555 aa12.06□□□□□ -0.48
SDF2-209ENST00000591903 SPRED2Q7Z698 418 aa12.06□□□□□ -0.48
SDF2-209ENST00000591903 WDR11Q9BZH6 1224 aa12.06□□□□□ -0.48
SDF2-209ENST00000591903 CYP39A1Q9NYL5 469 aa12.06□□□□□ -0.48
SDF2-209ENST00000591903 ADD3Q9UEY8 706 aaKnown RBP12.06□□□□□ -0.48
SDF2-209ENST00000591903 MICAL3Q7RTP6 2002 aa12.06□□□□□ -0.48
SDF2-209ENST00000591903 NLRC5Q86WI3 1866 aa12.06□□□□□ -0.48
SDF2-209ENST00000591903 IGKV6D-41A0A0C4DH26 115 aa12.05□□□□□ -0.48
SDF2-209ENST00000591903 ABHD14A-ACY1A0A1B0GW23 586 aa12.05□□□□□ -0.48
SDF2-209ENST00000591903 LINC01553A4QN01 128 aa12.05□□□□□ -0.48
SDF2-209ENST00000591903 PLA2G6O60733 806 aa12.05□□□□□ -0.48
SDF2-209ENST00000591903 ALAS1P13196 640 aa12.05□□□□□ -0.48
SDF2-209ENST00000591903 ZP2Q05996 745 aa12.05□□□□□ -0.48
SDF2-209ENST00000591903 TIGD5Q53EQ6 642 aa12.05□□□□□ -0.48
SDF2-209ENST00000591903 GIMAP6Q6P9H5 292 aa12.05□□□□□ -0.48
SDF2-209ENST00000591903 HFE2Q6ZVN8 426 aa12.05□□□□□ -0.48
SDF2-209ENST00000591903 ADHFE1Q8IWW8 467 aa12.05□□□□□ -0.48
SDF2-209ENST00000591903 ZNF444Q8N0Y2 327 aaPredicted RBP12.05□□□□□ -0.48
SDF2-209ENST00000591903 OR6J1Q8NGC5 347 aa12.05□□□□□ -0.48
SDF2-209ENST00000591903 MRPL38Q96DV4 380 aaKnown RBP12.05□□□□□ -0.48
SDF2-209ENST00000591903 MTMR4Q9NYA4 1195 aa12.05□□□□□ -0.48
SDF2-209ENST00000591903 MTUS1Q9ULD2 1270 aa12.05□□□□□ -0.48
SDF2-209ENST00000591903 RALGAPA2Q2PPJ7 1873 aa12.05□□□□□ -0.48
SDF2-209ENST00000591903 RBM47A0AV96 593 aaKnown RBP12.04□□□□□ -0.48
SDF2-209ENST00000591903 C19orf67A6NJJ6 358 aa12.04□□□□□ -0.48
SDF2-209ENST00000591903 TMEM232C9JQI7 657 aa12.04□□□□□ -0.48
SDF2-209ENST00000591903 SELPP16109 830 aa12.04□□□□□ -0.48
SDF2-209ENST00000591903 PTPN5P54829 565 aa12.04□□□□□ -0.48
SDF2-209ENST00000591903 DEFB103AP81534 67 aa12.04□□□□□ -0.48
SDF2-209ENST00000591903 IKQ13123 557 aaPredicted RBP12.04□□□□□ -0.48
SDF2-209ENST00000591903 PKN1Q16512 942 aa12.04□□□□□ -0.48
SDF2-209ENST00000591903 TMEM63BQ5T3F8 832 aa12.04□□□□□ -0.48
SDF2-209ENST00000591903 SLFN13Q68D06 897 aa12.04□□□□□ -0.48
SDF2-209ENST00000591903 FBXO22Q8NEZ5 403 aa12.04□□□□□ -0.48
SDF2-209ENST00000591903 STAG1Q8WVM7 1258 aa12.04□□□□□ -0.48
SDF2-209ENST00000591903 PABPC5Q96DU9 382 aaKnown RBP12.04□□□□□ -0.48
SDF2-209ENST00000591903 CEP95Q96GE4 821 aa12.04□□□□□ -0.48
SDF2-209ENST00000591903 GMCL1Q96IK5 515 aa12.04□□□□□ -0.48
SDF2-209ENST00000591903 SAMD11Q96NU1 681 aa12.04□□□□□ -0.48
SDF2-209ENST00000591903 MPHOSPH6Q99547 160 aaKnown RBP12.04□□□□□ -0.48
SDF2-209ENST00000591903 POP1Q99575 1024 aaKnown RBP12.04□□□□□ -0.48
SDF2-209ENST00000591903 ISY1Q9ULR0 285 aaKnown RBP12.04□□□□□ -0.48
SDF2-209ENST00000591903 USP34Q70CQ2 3546 aa12.04□□□□□ -0.48
SDF2-209ENST00000591903 PLIN4Q96Q06 1357 aa12.04□□□□□ -0.48
SDF2-209ENST00000591903 A6NJR5 290 aa12.03□□□□□ -0.48
SDF2-209ENST00000591903 NCK2O43639 380 aa12.03□□□□□ -0.48
SDF2-209ENST00000591903 CXCL10P02778 98 aa12.03□□□□□ -0.48
SDF2-209ENST00000591903 GSPT1P15170 499 aaKnown RBP12.03□□□□□ -0.48
SDF2-209ENST00000591903 ALDH5A1P51649 535 aaPredicted RBP12.03□□□□□ -0.48
SDF2-209ENST00000591903 RBL2Q08999 1139 aa12.03□□□□□ -0.48
SDF2-209ENST00000591903 IKBKEQ14164 716 aa12.03□□□□□ -0.48
SDF2-209ENST00000591903 PPP2R5BQ15173 497 aa12.03□□□□□ -0.48
SDF2-209ENST00000591903 PTGISQ16647 500 aa12.03□□□□□ -0.48
SDF2-209ENST00000591903 PPP4R3BQ5MIZ7 849 aa12.03□□□□□ -0.48
SDF2-209ENST00000591903 TSHZ3Q63HK5 1081 aa12.03□□□□□ -0.48
SDF2-209ENST00000591903 LRRC8DQ7L1W4 858 aa12.03□□□□□ -0.48
SDF2-209ENST00000591903 LRRC47Q8N1G4 583 aaKnown RBP12.03□□□□□ -0.48
SDF2-209ENST00000591903 APPBP2Q92624 585 aa12.03□□□□□ -0.48
SDF2-209ENST00000591903 INSL6Q9Y581 213 aa12.03□□□□□ -0.48
SDF2-209ENST00000591903 TRIOO75962 3097 aa12.02□□□□□ -0.49
SDF2-209ENST00000591903 H3BQ06 376 aaPredicted RBP12.02□□□□□ -0.49
SDF2-209ENST00000591903 RNF113AO15541 343 aaKnown RBP12.02□□□□□ -0.49
SDF2-209ENST00000591903 EIF5BO60841 1220 aaKnown RBP12.02□□□□□ -0.49
SDF2-209ENST00000591903 SDSP20132 328 aa12.02□□□□□ -0.49
SDF2-209ENST00000591903 SLC1A4P43007 532 aa12.02□□□□□ -0.49
SDF2-209ENST00000591903 SLFNL1Q499Z3 407 aa12.02□□□□□ -0.49
SDF2-209ENST00000591903 HERC4Q5GLZ8 1057 aaPredicted RBP12.02□□□□□ -0.49
SDF2-209ENST00000591903 MUM1L1Q5H9M0 696 aa12.02□□□□□ -0.49
SDF2-209ENST00000591903 NSMFQ6X4W1 530 aa12.02□□□□□ -0.49
SDF2-209ENST00000591903 BMP8AQ7Z5Y6 402 aa12.02□□□□□ -0.49
SDF2-209ENST00000591903 TMCO2Q7Z6W1 182 aaPredicted RBP12.02□□□□□ -0.49
SDF2-209ENST00000591903 SESTD1Q86VW0 696 aa12.02□□□□□ -0.49
SDF2-209ENST00000591903 FSD1Q9BTV5 496 aa12.02□□□□□ -0.49
SDF2-209ENST00000591903 DDX49Q9Y6V7 483 aaKnown RBP12.02□□□□□ -0.49
SDF2-209ENST00000591903 CFAP54Q96N23 3096 aa12.02□□□□□ -0.49
SDF2-209ENST00000591903 COL4A6Q14031 1691 aa12.01□□□□□ -0.49
SDF2-209ENST00000591903 TECTAO75443 2155 aa12.01□□□□□ -0.49
SDF2-209ENST00000591903 MINDY4BA8MYZ0 360 aa12.01□□□□□ -0.49
SDF2-209ENST00000591903 MFAP1P55081 439 aaKnown RBP12.01□□□□□ -0.49
SDF2-209ENST00000591903 COL19A1Q14993 1142 aa12.01□□□□□ -0.49
SDF2-209ENST00000591903 BANK1Q8NDB2 785 aa12.01□□□□□ -0.49
SDF2-209ENST00000591903 SCFD2Q8WU76 684 aa12.01□□□□□ -0.49
SDF2-209ENST00000591903 PUS7LQ9H0K6 701 aaKnown RBP12.01□□□□□ -0.49
SDF2-209ENST00000591903 HELLSQ9NRZ9 838 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms