RNA–Protein interactions for RNA: ENST00000591598.5

CTDP1-207, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best)

Gene CTDP1, Length 3,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-207ENST00000591598 USP17L19D6RCP7 530 aa18.69■□□□□ 0.58
CTDP1-207ENST00000591598 USP17L20D6RJB6 530 aa18.69■□□□□ 0.58
CTDP1-207ENST00000591598 BBOX1O75936 387 aa18.69■□□□□ 0.58
CTDP1-207ENST00000591598 ATP1A1P05023 1023 aaKnown RBP18.69■□□□□ 0.58
CTDP1-207ENST00000591598 HERVK_113P62684 666 aa18.69■□□□□ 0.58
CTDP1-207ENST00000591598 USP17L24Q0WX57 530 aa18.69■□□□□ 0.58
CTDP1-207ENST00000591598 KRT79Q5XKE5 535 aa18.69■□□□□ 0.58
CTDP1-207ENST00000591598 CNNM4Q6P4Q7 775 aa18.69■□□□□ 0.58
CTDP1-207ENST00000591598 USP17L6PQ6QN14 398 aa18.69■□□□□ 0.58
CTDP1-207ENST00000591598 TBC1D22AQ8WUA7 517 aa18.69■□□□□ 0.58
CTDP1-207ENST00000591598 JAKMIP2Q96AA8 810 aa18.69■□□□□ 0.58
CTDP1-207ENST00000591598 KCNQ5Q9NR82 932 aa18.69■□□□□ 0.58
CTDP1-207ENST00000591598 CAPN11Q9UMQ6 739 aa18.69■□□□□ 0.58
CTDP1-207ENST00000591598 RCCD1A6NED2 376 aa18.69■□□□□ 0.58
CTDP1-207ENST00000591598 PPEF1O14829 653 aaPredicted RBP18.69■□□□□ 0.58
CTDP1-207ENST00000591598 ZBTB22O15209 634 aa18.69■□□□□ 0.58
CTDP1-207ENST00000591598 PHACTR2O75167 634 aa18.69■□□□□ 0.58
CTDP1-207ENST00000591598 SAMD1Q6SPF0 538 aaPredicted RBP18.69■□□□□ 0.58
CTDP1-207ENST00000591598 C2CD5Q86YS7 1000 aa18.69■□□□□ 0.58
CTDP1-207ENST00000591598 CAGE1Q8TC20 777 aa18.69■□□□□ 0.58
CTDP1-207ENST00000591598 DBNDD1Q9H9R9 158 aa18.69■□□□□ 0.58
CTDP1-207ENST00000591598 JADE2Q9NQC1 790 aa18.69■□□□□ 0.58
CTDP1-207ENST00000591598 RGL2O15211 777 aa18.68■□□□□ 0.58
CTDP1-207ENST00000591598 SRGNP10124 158 aa18.68■□□□□ 0.58
CTDP1-207ENST00000591598 KIAA0825Q8IV33 1275 aa18.68■□□□□ 0.58
CTDP1-207ENST00000591598 DEF6Q9H4E7 631 aa18.68■□□□□ 0.58
CTDP1-207ENST00000591598 ABCB6Q9NP58 842 aa18.68■□□□□ 0.58
CTDP1-207ENST00000591598 BLOC1S4Q9NUP1 217 aa18.68■□□□□ 0.58
CTDP1-207ENST00000591598 VSNL1P62760 191 aa18.68■□□□□ 0.58
CTDP1-207ENST00000591598 IKQ13123 557 aaPredicted RBP18.68■□□□□ 0.58
CTDP1-207ENST00000591598 CRY2Q49AN0 593 aa18.68■□□□□ 0.58
CTDP1-207ENST00000591598 ZFPM1Q8IX07 1006 aa18.68■□□□□ 0.58
CTDP1-207ENST00000591598 NELFCDQ8IXH7 590 aa18.68■□□□□ 0.58
CTDP1-207ENST00000591598 ANKRD13CQ8N6S4 541 aa18.68■□□□□ 0.58
CTDP1-207ENST00000591598 TRERF1Q96PN7 1200 aa18.68■□□□□ 0.58
CTDP1-207ENST00000591598 JMJD4Q9H9V9 463 aa18.68■□□□□ 0.58
CTDP1-207ENST00000591598 POLD4Q9HCU8 107 aa18.68■□□□□ 0.58
CTDP1-207ENST00000591598 EPHB6O15197 1021 aa18.68■□□□□ 0.58
CTDP1-207ENST00000591598 KIF20AO95235 890 aa18.68■□□□□ 0.58
CTDP1-207ENST00000591598 TAL1P17542 331 aaPredicted RBP18.68■□□□□ 0.58
CTDP1-207ENST00000591598 DNA2P51530 1060 aa18.68■□□□□ 0.58
CTDP1-207ENST00000591598 MRPS25P82663 173 aaKnown RBP18.68■□□□□ 0.58
CTDP1-207ENST00000591598 NEK11Q8NG66 645 aa18.68■□□□□ 0.58
CTDP1-207ENST00000591598 DDX12PQ92771 950 aa18.68■□□□□ 0.58
CTDP1-207ENST00000591598 CCDC42Q96M95 316 aa18.68■□□□□ 0.58
CTDP1-207ENST00000591598 PNMA5Q96PV4 448 aa18.68■□□□□ 0.58
CTDP1-207ENST00000591598 FUT8Q9BYC5 575 aa18.68■□□□□ 0.58
CTDP1-207ENST00000591598 ZNF185O15231 689 aa18.67■□□□□ 0.58
CTDP1-207ENST00000591598 C7orf25Q9BPX7 421 aa18.67■□□□□ 0.58
CTDP1-207ENST00000591598 DDX25Q9UHL0 483 aaKnown RBP18.67■□□□□ 0.58
CTDP1-207ENST00000591598 PPP1R11O60927 126 aaPredicted RBP18.67■□□□□ 0.58
CTDP1-207ENST00000591598 TTLL1O95922 423 aa18.67■□□□□ 0.58
CTDP1-207ENST00000591598 DNAJC7Q99615 494 aa18.67■□□□□ 0.58
CTDP1-207ENST00000591598 RIOX1Q9H6W3 641 aa18.67■□□□□ 0.58
CTDP1-207ENST00000591598 RASSF10A6NK89 507 aa18.66■□□□□ 0.58
CTDP1-207ENST00000591598 MYL1P05976 194 aa18.66■□□□□ 0.58
CTDP1-207ENST00000591598 CYLC1P35663 651 aaPredicted RBP18.66■□□□□ 0.58
CTDP1-207ENST00000591598 ECM1Q16610 540 aa18.66■□□□□ 0.58
CTDP1-207ENST00000591598 FAM114A1Q8IWE2 563 aa18.66■□□□□ 0.58
CTDP1-207ENST00000591598 CRACR2AQ9BSW2 395 aa18.66■□□□□ 0.58
CTDP1-207ENST00000591598 CUEDC2Q9H467 287 aa18.66■□□□□ 0.58
CTDP1-207ENST00000591598 PDE11AQ9HCR9 933 aa18.66■□□□□ 0.58
CTDP1-207ENST00000591598 A0A1W2PQC6 194 aa18.66■□□□□ 0.58
CTDP1-207ENST00000591598 MSL1Q68DK7 614 aa18.66■□□□□ 0.58
CTDP1-207ENST00000591598 RAB34Q9BZG1 259 aa18.66■□□□□ 0.58
CTDP1-207ENST00000591598 NLRC4Q9NPP4 1024 aa18.66■□□□□ 0.58
CTDP1-207ENST00000591598 CCDC151A5D8V7 595 aa18.66■□□□□ 0.58
CTDP1-207ENST00000591598 MIIPQ5JXC2 388 aa18.66■□□□□ 0.58
CTDP1-207ENST00000591598 RRAGAQ7L523 313 aa18.66■□□□□ 0.58
CTDP1-207ENST00000591598 ZNF622Q969S3 477 aaKnown RBP eCLIP18.66■□□□□ 0.58
CTDP1-207ENST00000591598 PSTPIP2Q9H939 334 aa18.66■□□□□ 0.58
CTDP1-207ENST00000591598 NPHP3-ACAD11A0A0J9YXS1 232 aa18.65■□□□□ 0.58
CTDP1-207ENST00000591598 KRT86O43790 486 aa18.65■□□□□ 0.58
CTDP1-207ENST00000591598 MATR3P43243 847 aaKnown RBP eCLIP18.65■□□□□ 0.58
CTDP1-207ENST00000591598 ARID5AQ03989 594 aa18.65■□□□□ 0.58
CTDP1-207ENST00000591598 ASPRV1Q53RT3 343 aa18.65■□□□□ 0.58
CTDP1-207ENST00000591598 HAUS4Q9H6D7 363 aa18.65■□□□□ 0.58
CTDP1-207ENST00000591598 NAV1Q8NEY1 1877 aa18.65■□□□□ 0.58
CTDP1-207ENST00000591598 AFF2P51816 1311 aa18.65■□□□□ 0.58
CTDP1-207ENST00000591598 NAP1L1P55209 391 aaKnown RBP18.65■□□□□ 0.58
CTDP1-207ENST00000591598 KRT83P78385 493 aa18.65■□□□□ 0.58
CTDP1-207ENST00000591598 ZNF543Q08ER8 600 aa18.65■□□□□ 0.58
CTDP1-207ENST00000591598 SPA17Q15506 151 aa18.65■□□□□ 0.58
CTDP1-207ENST00000591598 MTMR9Q96QG7 549 aa18.65■□□□□ 0.58
CTDP1-207ENST00000591598 MMS19Q96T76 1030 aa18.65■□□□□ 0.58
CTDP1-207ENST00000591598 PCDHA12Q9UN75 941 aa18.65■□□□□ 0.58
CTDP1-207ENST00000591598 GAKO14976 1311 aa18.64■□□□□ 0.58
CTDP1-207ENST00000591598 E9PMD0 336 aa18.64■□□□□ 0.58
CTDP1-207ENST00000591598 AKR1B10O60218 316 aa18.64■□□□□ 0.58
CTDP1-207ENST00000591598 FECHP22830 423 aa18.64■□□□□ 0.58
CTDP1-207ENST00000591598 TNNT3P45378 269 aaPredicted RBP18.64■□□□□ 0.58
CTDP1-207ENST00000591598 USH1GQ495M9 461 aa18.64■□□□□ 0.58
CTDP1-207ENST00000591598 CCDC102AQ96A19 550 aa18.64■□□□□ 0.58
CTDP1-207ENST00000591598 NDST4Q9H3R1 872 aa18.64■□□□□ 0.58
CTDP1-207ENST00000591598 SAR1BQ9Y6B6 198 aa18.64■□□□□ 0.58
CTDP1-207ENST00000591598 UTRNP46939 3433 aa18.64■□□□□ 0.57
CTDP1-207ENST00000591598 TRAF5O00463 557 aa18.64■□□□□ 0.57
CTDP1-207ENST00000591598 EDIL3O43854 480 aa18.64■□□□□ 0.57
CTDP1-207ENST00000591598 N4BP1O75113 896 aaKnown RBP18.64■□□□□ 0.57
CTDP1-207ENST00000591598 KRT18P05783 430 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms