RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 ESYT2A0FGR8 921 aa21.57■■□□□ 1.04
MBD1-223ENST00000590215 CDKL5O76039 1030 aa21.57■■□□□ 1.04
MBD1-223ENST00000590215 CTDNEP1O95476 244 aa21.57■■□□□ 1.04
MBD1-223ENST00000590215 NAPAP54920 295 aa21.57■■□□□ 1.04
MBD1-223ENST00000590215 USP17L6PQ6QN14 398 aa21.57■■□□□ 1.04
MBD1-223ENST00000590215 NOL8Q76FK4 1167 aaKnown RBP21.57■■□□□ 1.04
MBD1-223ENST00000590215 TRIM22Q8IYM9 498 aa21.57■■□□□ 1.04
MBD1-223ENST00000590215 VTA1Q9NP79 307 aa21.57■■□□□ 1.04
MBD1-223ENST00000590215 RIC8AQ9NPQ8 531 aa21.57■■□□□ 1.04
MBD1-223ENST00000590215 PXMP2Q9NR77 195 aa21.57■■□□□ 1.04
MBD1-223ENST00000590215 OGDHLQ9ULD0 1010 aa21.57■■□□□ 1.04
MBD1-223ENST00000590215 DDX49Q9Y6V7 483 aaKnown RBP21.57■■□□□ 1.04
MBD1-223ENST00000590215 FRMPD4Q14CM0 1322 aa21.56■■□□□ 1.04
MBD1-223ENST00000590215 PPFIA3O75145 1194 aa21.56■■□□□ 1.04
MBD1-223ENST00000590215 DEXIO95424 95 aa21.56■■□□□ 1.04
MBD1-223ENST00000590215 AKR1A1P14550 325 aa21.56■■□□□ 1.04
MBD1-223ENST00000590215 EN2P19622 333 aaPredicted RBP21.56■■□□□ 1.04
MBD1-223ENST00000590215 CNGA1P29973 690 aa21.56■■□□□ 1.04
MBD1-223ENST00000590215 RGS19P49795 217 aa21.56■■□□□ 1.04
MBD1-223ENST00000590215 IFFO2Q5TF58 517 aa21.56■■□□□ 1.04
MBD1-223ENST00000590215 ARHGEF16Q5VV41 709 aa21.56■■□□□ 1.04
MBD1-223ENST00000590215 TAPT1Q6NXT6 567 aa21.56■■□□□ 1.04
MBD1-223ENST00000590215 NECAB1Q8N987 351 aa21.56■■□□□ 1.04
MBD1-223ENST00000590215 CUL5Q93034 780 aa21.56■■□□□ 1.04
MBD1-223ENST00000590215 ZSCAN31Q96LW9 406 aaPredicted RBP21.56■■□□□ 1.04
MBD1-223ENST00000590215 PDCD2LQ9BRP1 358 aa21.56■■□□□ 1.04
MBD1-223ENST00000590215 GLT8D2Q9H1C3 349 aa21.56■■□□□ 1.04
MBD1-223ENST00000590215 SH3GLB2Q9NR46 395 aa21.56■■□□□ 1.04
MBD1-223ENST00000590215 ZHX1Q9UKY1 873 aaPredicted RBP21.56■■□□□ 1.04
MBD1-223ENST00000590215 FAM184BQ9ULE4 1060 aa21.56■■□□□ 1.04
MBD1-223ENST00000590215 STK36Q9NRP7 1315 aa21.55■■□□□ 1.04
MBD1-223ENST00000590215 ST18O60284 1047 aa21.55■■□□□ 1.04
MBD1-223ENST00000590215 PDE4DQ08499 809 aa21.55■■□□□ 1.04
MBD1-223ENST00000590215 ST3GAL1Q11201 340 aa21.55■■□□□ 1.04
MBD1-223ENST00000590215 FAM177A1Q8N128 213 aaPredicted RBP21.55■■□□□ 1.04
MBD1-223ENST00000590215 CCDC12Q8WUD4 166 aaPredicted RBP21.55■■□□□ 1.04
MBD1-223ENST00000590215 ZMYND12Q9H0C1 365 aa21.55■■□□□ 1.04
MBD1-223ENST00000590215 LRRC37A2A6NM11 1700 aa21.55■■□□□ 1.04
MBD1-223ENST00000590215 RBM47A0AV96 593 aaKnown RBP21.54■■□□□ 1.04
MBD1-223ENST00000590215 SMCO2A6NFE2 343 aa21.54■■□□□ 1.04
MBD1-223ENST00000590215 NR3C2P08235 984 aa21.54■■□□□ 1.04
MBD1-223ENST00000590215 EIF2AK2P19525 551 aaKnown RBP21.54■■□□□ 1.04
MBD1-223ENST00000590215 CCDC144BQ3MJ40 725 aa21.54■■□□□ 1.04
MBD1-223ENST00000590215 VSIG10LQ86VR7 867 aa21.54■■□□□ 1.04
MBD1-223ENST00000590215 FCHSD1Q86WN1 690 aa21.54■■□□□ 1.04
MBD1-223ENST00000590215 SMARCC2Q8TAQ2 1214 aa21.54■■□□□ 1.04
MBD1-223ENST00000590215 SH2B1Q9NRF2 756 aaPredicted RBP21.54■■□□□ 1.04
MBD1-223ENST00000590215 CAPN15O75808 1086 aa21.53■■□□□ 1.04
MBD1-223ENST00000590215 TFRCP02786 760 aaKnown RBP21.53■■□□□ 1.04
MBD1-223ENST00000590215 ADCY7P51828 1080 aa21.53■■□□□ 1.04
MBD1-223ENST00000590215 PGM5Q15124 567 aa21.53■■□□□ 1.04
MBD1-223ENST00000590215 STXBP2Q15833 593 aa21.53■■□□□ 1.04
MBD1-223ENST00000590215 IQSEC1Q6DN90 963 aa21.53■■□□□ 1.04
MBD1-223ENST00000590215 UBE2Q1Q7Z7E8 422 aa21.53■■□□□ 1.04
MBD1-223ENST00000590215 FBXO16Q8IX29 292 aaPredicted RBP21.53■■□□□ 1.04
MBD1-223ENST00000590215 ANKLE1Q8NAG6 615 aa21.53■■□□□ 1.04
MBD1-223ENST00000590215 NSUN7Q8NE18 718 aaKnown RBP21.53■■□□□ 1.04
MBD1-223ENST00000590215 ADCY6O43306 1168 aa21.52■■□□□ 1.04
MBD1-223ENST00000590215 EIF3JO75822 258 aaKnown RBP21.52■■□□□ 1.04
MBD1-223ENST00000590215 RARBP10826 455 aa21.52■■□□□ 1.04
MBD1-223ENST00000590215 CLK2P49760 499 aaKnown RBP21.52■■□□□ 1.04
MBD1-223ENST00000590215 MNX1P50219 401 aaPredicted RBP21.52■■□□□ 1.04
MBD1-223ENST00000590215 EEPD1Q7L9B9 569 aa21.52■■□□□ 1.04
MBD1-223ENST00000590215 CCDC148Q8NFR7 591 aa21.52■■□□□ 1.04
MBD1-223ENST00000590215 PDGFCQ9NRA1 345 aa21.52■■□□□ 1.04
MBD1-223ENST00000590215 DUSP11O75319 330 aaKnown RBP21.51■■□□□ 1.03
MBD1-223ENST00000590215 FOSP01100 380 aaPredicted RBP21.51■■□□□ 1.03
MBD1-223ENST00000590215 FDPSP14324 419 aaKnown RBP21.51■■□□□ 1.03
MBD1-223ENST00000590215 MCM2P49736 904 aa21.51■■□□□ 1.03
MBD1-223ENST00000590215 UBE2SQ16763 222 aa21.51■■□□□ 1.03
MBD1-223ENST00000590215 IL31RAQ8NI17 732 aa21.51■■□□□ 1.03
MBD1-223ENST00000590215 GNEQ9Y223 722 aaKnown RBP21.51■■□□□ 1.03
MBD1-223ENST00000590215 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.5■■□□□ 1.03
MBD1-223ENST00000590215 CD2BP2O95400 341 aaKnown RBP21.5■■□□□ 1.03
MBD1-223ENST00000590215 GNA11P29992 359 aa21.5■■□□□ 1.03
MBD1-223ENST00000590215 ADCYAP1R1P41586 468 aa21.5■■□□□ 1.03
MBD1-223ENST00000590215 NKX3-2P78367 333 aa21.5■■□□□ 1.03
MBD1-223ENST00000590215 TNFAIP2Q03169 654 aa21.5■■□□□ 1.03
MBD1-223ENST00000590215 ANO1Q5XXA6 986 aa21.5■■□□□ 1.03
MBD1-223ENST00000590215 XRRA1Q6P2D8 792 aa21.5■■□□□ 1.03
MBD1-223ENST00000590215 SCFD2Q8WU76 684 aa21.5■■□□□ 1.03
MBD1-223ENST00000590215 LLPHQ9BRT6 129 aaKnown RBP21.5■■□□□ 1.03
MBD1-223ENST00000590215 C6orf50Q9HD87 102 aa21.5■■□□□ 1.03
MBD1-223ENST00000590215 VPS54Q9P1Q0 977 aa21.5■■□□□ 1.03
MBD1-223ENST00000590215 ORC3Q9UBD5 711 aaPredicted RBP21.5■■□□□ 1.03
MBD1-223ENST00000590215 PCDHA6Q9UN73 950 aa21.5■■□□□ 1.03
MBD1-223ENST00000590215 Q9Y3F1 56 aa21.5■■□□□ 1.03
MBD1-223ENST00000590215 PCDHA8Q9Y5H6 950 aa21.5■■□□□ 1.03
MBD1-223ENST00000590215 FRMPD3Q5JV73 1810 aa21.5■■□□□ 1.03
MBD1-223ENST00000590215 SPDYE3A6NKU9 549 aa21.49■■□□□ 1.03
MBD1-223ENST00000590215 STAM2O75886 525 aa21.49■■□□□ 1.03
MBD1-223ENST00000590215 RGS20O76081 388 aa21.49■■□□□ 1.03
MBD1-223ENST00000590215 SMPD1P17405 629 aa21.49■■□□□ 1.03
MBD1-223ENST00000590215 CCND2P30279 289 aa21.49■■□□□ 1.03
MBD1-223ENST00000590215 AP3B2Q13367 1082 aa21.49■■□□□ 1.03
MBD1-223ENST00000590215 DUSP28Q4G0W2 176 aa21.49■■□□□ 1.03
MBD1-223ENST00000590215 PCNX4Q63HM2 1172 aa21.49■■□□□ 1.03
MBD1-223ENST00000590215 LENG1Q96BZ8 264 aaPredicted RBP21.49■■□□□ 1.03
MBD1-223ENST00000590215 AIFM3Q96NN9 605 aa21.49■■□□□ 1.03
MBD1-223ENST00000590215 UPF3AQ9H1J1 476 aaKnown RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms