RNA–Protein interactions for RNA: ENST00000590115.1

LDLRAD4-213, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-213ENST00000590115 GPATCH4Q5T3I0 446 aaKnown RBP7.07□□□□□ -1.28
LDLRAD4-213ENST00000590115 MAMDC4Q6UXC1 1216 aa7.07□□□□□ -1.28
LDLRAD4-213ENST00000590115 GPR142Q7Z601 462 aa7.07□□□□□ -1.28
LDLRAD4-213ENST00000590115 SH3RF1Q7Z6J0 888 aa7.07□□□□□ -1.28
LDLRAD4-213ENST00000590115 CATIPQ7Z7H3 387 aa7.07□□□□□ -1.28
LDLRAD4-213ENST00000590115 FAM160B2Q86V87 743 aa7.07□□□□□ -1.28
LDLRAD4-213ENST00000590115 CCDC83Q8IWF9 413 aa7.07□□□□□ -1.28
LDLRAD4-213ENST00000590115 FAM133AQ8N9E0 248 aa7.07□□□□□ -1.28
LDLRAD4-213ENST00000590115 TRPV1Q8NER1 839 aa7.07□□□□□ -1.28
LDLRAD4-213ENST00000590115 IL31RAQ8NI17 732 aa7.07□□□□□ -1.28
LDLRAD4-213ENST00000590115 PIBF1Q8WXW3 757 aa7.07□□□□□ -1.28
LDLRAD4-213ENST00000590115 KHSRPQ92945 711 aaKnown RBP eCLIP7.07□□□□□ -1.28
LDLRAD4-213ENST00000590115 TRIM43Q96BQ3 446 aaPredicted RBP7.07□□□□□ -1.28
LDLRAD4-213ENST00000590115 PAGR1Q9BTK6 254 aa7.07□□□□□ -1.28
LDLRAD4-213ENST00000590115 SH2D4AQ9H788 454 aa7.07□□□□□ -1.28
LDLRAD4-213ENST00000590115 VAT1LQ9HCJ6 419 aa7.07□□□□□ -1.28
LDLRAD4-213ENST00000590115 A1CFQ9NQ94 594 aaKnown RBP7.07□□□□□ -1.28
LDLRAD4-213ENST00000590115 PDLIM7Q9NR12 457 aa7.07□□□□□ -1.28
LDLRAD4-213ENST00000590115 LIMCH1Q9UPQ0 1083 aa7.07□□□□□ -1.28
LDLRAD4-213ENST00000590115 V9GY48 417 aaPredicted RBP7.07□□□□□ -1.28
LDLRAD4-213ENST00000590115 TRIOO75962 3097 aa7.07□□□□□ -1.28
LDLRAD4-213ENST00000590115 MYH6P13533 1939 aa7.07□□□□□ -1.28
LDLRAD4-213ENST00000590115 FRMPD4Q14CM0 1322 aa7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 DCHS1Q96JQ0 3298 aa7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 MYO15AQ9UKN7 3530 aa7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 CCDC69A6NI79 296 aa7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 KIF28PB7ZC32 967 aa7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 ZBTB5O15062 677 aa7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 RAD21O60216 631 aa7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 RGS20O76081 388 aa7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 PGK2P07205 417 aa7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 BMP1P13497 986 aa7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 PTPREP23469 700 aa7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 STAT3P40763 770 aa7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 GCLCP48506 637 aaPredicted RBP7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 HSD17B4P51659 736 aa7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 IRX5P78411 483 aaPredicted RBP7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 IRX3P78415 501 aaPredicted RBP7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 PFKFB3Q16875 520 aaPredicted RBP7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 SNRNP48Q6IEG0 339 aaKnown RBP7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 CPXCR1Q8N123 301 aa7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 TMTC2Q8N394 836 aa7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 SHCBP1Q8NEM2 672 aa7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 OXER1Q8TDS5 423 aa7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 PPM1EQ8WY54 764 aa7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 ZNF576Q9H609 170 aa7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 BCAS3Q9H6U6 928 aa7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 HOXC10Q9NYD6 342 aa7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 CYP39A1Q9NYL5 469 aa7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 ZDHHC9Q9Y397 364 aa7.06□□□□□ -1.28
LDLRAD4-213ENST00000590115 STK36Q9NRP7 1315 aa7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 PNMA6FA0A0J9YX94 578 aa7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 PTPDC1A2A3K4 754 aa7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 SNAI1O95863 264 aaPredicted RBP7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 HOXC6P09630 235 aa7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 EDNRBP24530 442 aa7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 SLC4A3P48751 1232 aa7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 OAZ1P54368 228 aa7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 SEMA3FQ13275 785 aa7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 PKP1Q13835 747 aa7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 UBE2SQ16763 222 aa7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 TRIM60Q495X7 471 aa7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 SAMD1Q6SPF0 538 aaPredicted RBP7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 NFXL1Q6ZNB6 911 aa7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 HOMER1Q86YM7 354 aa7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 GPRC5AQ8NFJ5 357 aa7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 RASGRP4Q8TDF6 673 aa7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 SYTL5Q8TDW5 730 aaPredicted RBP7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 MORC4Q8TE76 937 aa7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 CHURC1Q8WUH1 139 aa7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 CHAMP1Q96JM3 812 aa7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 RNPC3Q96LT9 517 aaKnown RBP7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 TAAR1Q96RJ0 339 aa7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 TEX13BQ9BXU2 312 aa7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 RNF146Q9NTX7 359 aa7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 TMEM260Q9NX78 707 aa7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 VPS54Q9P1Q0 977 aa7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 PNMA3Q9UL41 463 aa7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 ATP11BQ9Y2G3 1177 aa7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 DMDP11532 3685 aa7.05□□□□□ -1.28
LDLRAD4-213ENST00000590115 ERICH2A1L162 156 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 FAM86C2PA6NEL3 165 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 DNM1LO00429 736 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 CALM1P0DP23 149 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 CALM2P0DP24 149 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 CALM3P0DP25 149 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 ALAS1P13196 640 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 ADORA2AP29274 412 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 HOXA13P31271 388 aaPredicted RBP7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 PBX2P40425 430 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 MRE11P49959 708 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 KCNQ1P51787 676 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 RPS6P62753 249 aaKnown RBP7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 MRPS9P82933 396 aaKnown RBP7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 TFF2Q03403 129 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 BAATQ14032 418 aaPredicted RBP7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 SART3Q15020 963 aaKnown RBP7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 USH1GQ495M9 461 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 PPP4R3BQ5MIZ7 849 aa7.04□□□□□ -1.28
LDLRAD4-213ENST00000590115 USP17L6PQ6QN14 398 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms