RNA–Protein interactions for RNA: ENST00000590062.1

GPATCH1-202, Transcript of G-patch domain containing 1, humanhuman

TSL 2

Gene GPATCH1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-202ENST00000590062 C6orf50Q9HD87 102 aa14.01□□□□□ -0.17
GPATCH1-202ENST00000590062 NRBP1Q9UHY1 535 aa14.01□□□□□ -0.17
GPATCH1-202ENST00000590062 LRRC37A2A6NM11 1700 aa14.01□□□□□ -0.17
GPATCH1-202ENST00000590062 ASB14A6NK59 587 aa14□□□□□ -0.17
GPATCH1-202ENST00000590062 CCDC85CA6NKD9 419 aa14□□□□□ -0.17
GPATCH1-202ENST00000590062 B4DLN1 442 aa14□□□□□ -0.17
GPATCH1-202ENST00000590062 MYCP01106 439 aaPredicted RBP14□□□□□ -0.17
GPATCH1-202ENST00000590062 XBP1P17861 261 aa14□□□□□ -0.17
GPATCH1-202ENST00000590062 AP3B2Q13367 1082 aa14□□□□□ -0.17
GPATCH1-202ENST00000590062 MCTP2Q6DN12 878 aa14□□□□□ -0.17
GPATCH1-202ENST00000590062 USP17L6PQ6QN14 398 aa14□□□□□ -0.17
GPATCH1-202ENST00000590062 NSUN6Q8TEA1 469 aaKnown RBP14□□□□□ -0.17
GPATCH1-202ENST00000590062 TAAR1Q96RJ0 339 aa14□□□□□ -0.17
GPATCH1-202ENST00000590062 IWS1Q96ST2 819 aa14□□□□□ -0.17
GPATCH1-202ENST00000590062 TINF2Q9BSI4 451 aa14□□□□□ -0.17
GPATCH1-202ENST00000590062 PHF20Q9BVI0 1012 aa14□□□□□ -0.17
GPATCH1-202ENST00000590062 TMEM106CQ9BVX2 250 aa14□□□□□ -0.17
GPATCH1-202ENST00000590062 HMX1Q9NP08 348 aaPredicted RBP14□□□□□ -0.17
GPATCH1-202ENST00000590062 PXMP2Q9NR77 195 aa14□□□□□ -0.17
GPATCH1-202ENST00000590062 CNPY2Q9Y2B0 182 aa14□□□□□ -0.17
GPATCH1-202ENST00000590062 ZSCAN21Q9Y5A6 473 aaPredicted RBP14□□□□□ -0.17
GPATCH1-202ENST00000590062 M0R2N6 131 aa13.99□□□□□ -0.17
GPATCH1-202ENST00000590062 DTNBO60941 627 aa13.99□□□□□ -0.17
GPATCH1-202ENST00000590062 SNAI1O95863 264 aaPredicted RBP13.99□□□□□ -0.17
GPATCH1-202ENST00000590062 FOSP01100 380 aaPredicted RBP13.99□□□□□ -0.17
GPATCH1-202ENST00000590062 CCL5P13501 91 aa13.99□□□□□ -0.17
GPATCH1-202ENST00000590062 CYP2C19P33261 490 aa13.99□□□□□ -0.17
GPATCH1-202ENST00000590062 ARMCX2Q7L311 632 aa13.99□□□□□ -0.17
GPATCH1-202ENST00000590062 BICD2Q8TD16 824 aa13.99□□□□□ -0.17
GPATCH1-202ENST00000590062 RMDN3Q96TC7 470 aa13.99□□□□□ -0.17
GPATCH1-202ENST00000590062 RNF208Q9H0X6 261 aa13.99□□□□□ -0.17
GPATCH1-202ENST00000590062 PCDHA4Q9UN74 947 aa13.99□□□□□ -0.17
GPATCH1-202ENST00000590062 CYBAP13498 195 aa13.98□□□□□ -0.17
GPATCH1-202ENST00000590062 NLRP5P59047 1200 aa13.98□□□□□ -0.17
GPATCH1-202ENST00000590062 CACNB2Q08289 660 aaPredicted RBP13.98□□□□□ -0.17
GPATCH1-202ENST00000590062 TRIM32Q13049 653 aa13.98□□□□□ -0.17
GPATCH1-202ENST00000590062 UBE2SQ16763 222 aa13.98□□□□□ -0.17
GPATCH1-202ENST00000590062 REXO1Q8N1G1 1221 aaKnown RBP13.98□□□□□ -0.17
GPATCH1-202ENST00000590062 PDCD2LQ9BRP1 358 aa13.98□□□□□ -0.17
GPATCH1-202ENST00000590062 KATNBL1Q9H079 304 aa13.98□□□□□ -0.17
GPATCH1-202ENST00000590062 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.98□□□□□ -0.17
GPATCH1-202ENST00000590062 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.98□□□□□ -0.17
GPATCH1-202ENST00000590062 KIF3AQ9Y496 699 aa13.98□□□□□ -0.17
GPATCH1-202ENST00000590062 SPDYE3A6NKU9 549 aa13.97□□□□□ -0.17
GPATCH1-202ENST00000590062 ADAMTS3O15072 1205 aa13.97□□□□□ -0.17
GPATCH1-202ENST00000590062 MSCO60682 206 aa13.97□□□□□ -0.17
GPATCH1-202ENST00000590062 CNGA1P29973 690 aa13.97□□□□□ -0.17
GPATCH1-202ENST00000590062 PGM5Q15124 567 aa13.97□□□□□ -0.17
GPATCH1-202ENST00000590062 MTFR1Q15390 333 aa13.97□□□□□ -0.17
GPATCH1-202ENST00000590062 ARHGEF16Q5VV41 709 aa13.97□□□□□ -0.17
GPATCH1-202ENST00000590062 XRRA1Q6P2D8 792 aa13.97□□□□□ -0.17
GPATCH1-202ENST00000590062 FCHSD1Q86WN1 690 aa13.97□□□□□ -0.17
GPATCH1-202ENST00000590062 BLIDQ8IZY5 108 aa13.97□□□□□ -0.17
GPATCH1-202ENST00000590062 FAM184AQ8NB25 1140 aa13.97□□□□□ -0.17
GPATCH1-202ENST00000590062 ANO3Q9BYT9 981 aa13.97□□□□□ -0.17
GPATCH1-202ENST00000590062 UNC93B1Q9H1C4 597 aa13.97□□□□□ -0.17
GPATCH1-202ENST00000590062 ABHD16BQ9H3Z7 469 aa13.97□□□□□ -0.17
GPATCH1-202ENST00000590062 GJB4Q9NTQ9 266 aa13.97□□□□□ -0.17
GPATCH1-202ENST00000590062 ZHX1Q9UKY1 873 aaPredicted RBP13.97□□□□□ -0.17
GPATCH1-202ENST00000590062 PCDHA6Q9UN73 950 aa13.97□□□□□ -0.17
GPATCH1-202ENST00000590062 KCNJ14Q9UNX9 436 aa13.97□□□□□ -0.17
GPATCH1-202ENST00000590062 SMC3Q9UQE7 1217 aa13.97□□□□□ -0.17
GPATCH1-202ENST00000590062 PCDHA8Q9Y5H6 950 aa13.97□□□□□ -0.17
GPATCH1-202ENST00000590062 MMP1P03956 469 aa13.96□□□□□ -0.17
GPATCH1-202ENST00000590062 NR3C2P08235 984 aa13.96□□□□□ -0.17
GPATCH1-202ENST00000590062 ZNF865P0CJ78 1059 aaPredicted RBP13.96□□□□□ -0.17
GPATCH1-202ENST00000590062 EIF2AK2P19525 551 aaKnown RBP13.96□□□□□ -0.17
GPATCH1-202ENST00000590062 GJB2P29033 226 aa13.96□□□□□ -0.17
GPATCH1-202ENST00000590062 SREBF1P36956 1147 aa13.96□□□□□ -0.17
GPATCH1-202ENST00000590062 PDE4DQ08499 809 aa13.96□□□□□ -0.17
GPATCH1-202ENST00000590062 TRIM29Q14134 588 aa13.96□□□□□ -0.17
GPATCH1-202ENST00000590062 PCNX4Q63HM2 1172 aa13.96□□□□□ -0.17
GPATCH1-202ENST00000590062 KRT40Q6A162 431 aa13.96□□□□□ -0.17
GPATCH1-202ENST00000590062 VSIG10LQ86VR7 867 aa13.96□□□□□ -0.17
GPATCH1-202ENST00000590062 TRPV1Q8NER1 839 aa13.96□□□□□ -0.17
GPATCH1-202ENST00000590062 FBXO18Q8NFZ0 1043 aa13.96□□□□□ -0.17
GPATCH1-202ENST00000590062 CRYGNQ8WXF5 182 aa13.96□□□□□ -0.17
GPATCH1-202ENST00000590062 C8orf76Q96K31 380 aa13.96□□□□□ -0.17
GPATCH1-202ENST00000590062 EHMT1Q9H9B1 1298 aa13.96□□□□□ -0.17
GPATCH1-202ENST00000590062 VTA1Q9NP79 307 aa13.96□□□□□ -0.17
GPATCH1-202ENST00000590062 PAK6Q9NQU5 681 aaPredicted RBP13.96□□□□□ -0.17
GPATCH1-202ENST00000590062 MCM3APO60318 1980 aa13.96□□□□□ -0.18
GPATCH1-202ENST00000590062 STAM2O75886 525 aa13.95□□□□□ -0.18
GPATCH1-202ENST00000590062 GJB1P08034 283 aa13.95□□□□□ -0.18
GPATCH1-202ENST00000590062 AKR1A1P14550 325 aa13.95□□□□□ -0.18
GPATCH1-202ENST00000590062 CAPN2P17655 700 aa13.95□□□□□ -0.18
GPATCH1-202ENST00000590062 CCND3P30281 292 aaPredicted RBP13.95□□□□□ -0.18
GPATCH1-202ENST00000590062 ACVR2BQ13705 512 aa13.95□□□□□ -0.18
GPATCH1-202ENST00000590062 IL31RAQ8NI17 732 aa13.95□□□□□ -0.18
GPATCH1-202ENST00000590062 TNFRSF25Q93038 417 aa13.95□□□□□ -0.18
GPATCH1-202ENST00000590062 DEFB118Q96PH6 123 aa13.95□□□□□ -0.18
GPATCH1-202ENST00000590062 TMEM260Q9NX78 707 aa13.95□□□□□ -0.18
GPATCH1-202ENST00000590062 RBM47A0AV96 593 aaKnown RBP13.94□□□□□ -0.18
GPATCH1-202ENST00000590062 SEPT4O43236 478 aa13.94□□□□□ -0.18
GPATCH1-202ENST00000590062 EIF3JO75822 258 aaKnown RBP13.94□□□□□ -0.18
GPATCH1-202ENST00000590062 CCND2P30279 289 aa13.94□□□□□ -0.18
GPATCH1-202ENST00000590062 KRT2P35908 639 aa13.94□□□□□ -0.18
GPATCH1-202ENST00000590062 SOX10P56693 466 aa13.94□□□□□ -0.18
GPATCH1-202ENST00000590062 STXBP2Q15833 593 aa13.94□□□□□ -0.18
GPATCH1-202ENST00000590062 JAKMIP3Q5VZ66 844 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms