RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 MAD2L2Q9UI95 211 aa12.3□□□□□ -0.44
CLPTM1-211ENST00000589347 ASTN1O14525 1302 aa12.3□□□□□ -0.44
CLPTM1-211ENST00000589347 KAT6AQ92794 2004 aa12.3□□□□□ -0.44
CLPTM1-211ENST00000589347 DOCK5Q9H7D0 1870 aa12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 MYADML2A6NDP7 307 aa12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 ADCY6O43306 1168 aa12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 PRC1O43663 620 aa12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 CALM1P0DP23 149 aa12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 CALM2P0DP24 149 aa12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 CALM3P0DP25 149 aa12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 CPT1AP50416 773 aa12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 NKX3-2P78367 333 aa12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 TTLL4Q14679 1199 aa12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 FSCN1Q16658 493 aaKnown RBP12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 DUSP28Q4G0W2 176 aa12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 CHST3Q7LGC8 479 aa12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 HOMER1Q86YM7 354 aa12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 ZNF654Q8IZM8 581 aa12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 STAG2Q8N3U4 1231 aa12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 SAMD3Q8N6K7 520 aa12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 NSUN6Q8TEA1 469 aaKnown RBP12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 SCFD2Q8WU76 684 aa12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 ATXN2LQ8WWM7 1075 aaKnown RBP12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 BADQ92934 168 aa12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 MAP3K14Q99558 947 aa12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 LZTS2Q9BRK4 669 aa12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 SEZ6LQ9BYH1 1024 aa12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 MAP3K20Q9NYL2 800 aaKnown RBP12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 GNEQ9Y223 722 aaKnown RBP12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 ARIH1Q9Y4X5 557 aaPredicted RBP12.29□□□□□ -0.44
CLPTM1-211ENST00000589347 TRANK1O15050 2925 aa12.28□□□□□ -0.44
CLPTM1-211ENST00000589347 SH2B2O14492 632 aaPredicted RBP12.28□□□□□ -0.44
CLPTM1-211ENST00000589347 CFBP00751 764 aa12.28□□□□□ -0.44
CLPTM1-211ENST00000589347 SMPD1P17405 629 aa12.28□□□□□ -0.44
CLPTM1-211ENST00000589347 EDNRBP24530 442 aa12.28□□□□□ -0.44
CLPTM1-211ENST00000589347 GNAQP50148 359 aa12.28□□□□□ -0.44
CLPTM1-211ENST00000589347 ANTXR2P58335 489 aa12.28□□□□□ -0.44
CLPTM1-211ENST00000589347 TLE2Q04725 743 aa12.28□□□□□ -0.44
CLPTM1-211ENST00000589347 KRT32Q14532 448 aa12.28□□□□□ -0.44
CLPTM1-211ENST00000589347 GRIN2CQ14957 1233 aa12.28□□□□□ -0.44
CLPTM1-211ENST00000589347 ARHGEF16Q5VV41 709 aa12.28□□□□□ -0.44
CLPTM1-211ENST00000589347 CCSAPQ6IQ19 270 aaPredicted RBP12.28□□□□□ -0.44
CLPTM1-211ENST00000589347 TAPT1Q6NXT6 567 aa12.28□□□□□ -0.44
CLPTM1-211ENST00000589347 OR6J1Q8NGC5 347 aa12.28□□□□□ -0.44
CLPTM1-211ENST00000589347 TOX2Q96NM4 488 aa12.28□□□□□ -0.44
CLPTM1-211ENST00000589347 PURBQ96QR8 312 aaKnown RBP12.28□□□□□ -0.44
CLPTM1-211ENST00000589347 IWS1Q96ST2 819 aa12.28□□□□□ -0.44
CLPTM1-211ENST00000589347 WDR11Q9BZH6 1224 aa12.28□□□□□ -0.44
CLPTM1-211ENST00000589347 LY9Q9HBG7 655 aa12.28□□□□□ -0.44
CLPTM1-211ENST00000589347 POLR3EQ9NVU0 708 aa12.28□□□□□ -0.44
CLPTM1-211ENST00000589347 SEC63Q9UGP8 760 aaKnown RBP12.28□□□□□ -0.44
CLPTM1-211ENST00000589347 TAF6LQ9Y6J9 622 aa12.28□□□□□ -0.44
CLPTM1-211ENST00000589347 RBM47A0AV96 593 aaKnown RBP12.27□□□□□ -0.45
CLPTM1-211ENST00000589347 DYNC1LI2O43237 492 aaPredicted RBP12.27□□□□□ -0.45
CLPTM1-211ENST00000589347 RAG1P15918 1043 aa12.27□□□□□ -0.45
CLPTM1-211ENST00000589347 BEX3Q00994 111 aa12.27□□□□□ -0.45
CLPTM1-211ENST00000589347 TROAPQ12815 778 aa12.27□□□□□ -0.45
CLPTM1-211ENST00000589347 NECTIN1Q15223 517 aa12.27□□□□□ -0.45
CLPTM1-211ENST00000589347 SYNE3Q6ZMZ3 975 aa12.27□□□□□ -0.45
CLPTM1-211ENST00000589347 ANKRD33Q7Z3H0 272 aa12.27□□□□□ -0.45
CLPTM1-211ENST00000589347 SYTL5Q8TDW5 730 aaPredicted RBP12.27□□□□□ -0.45
CLPTM1-211ENST00000589347 ADAMTS19Q8TE59 1207 aa12.27□□□□□ -0.45
CLPTM1-211ENST00000589347 MTMR8Q96EF0 704 aa12.27□□□□□ -0.45
CLPTM1-211ENST00000589347 ASB2Q96Q27 587 aa12.27□□□□□ -0.45
CLPTM1-211ENST00000589347 RMDN3Q96TC7 470 aa12.27□□□□□ -0.45
CLPTM1-211ENST00000589347 SPZ1Q9BXG8 430 aa12.27□□□□□ -0.45
CLPTM1-211ENST00000589347 RIOX1Q9H6W3 641 aa12.27□□□□□ -0.45
CLPTM1-211ENST00000589347 GPHNQ9NQX3 736 aaPredicted RBP12.27□□□□□ -0.45
CLPTM1-211ENST00000589347 PDGFCQ9NRA1 345 aa12.27□□□□□ -0.45
CLPTM1-211ENST00000589347 TMEM39AQ9NV64 488 aa12.27□□□□□ -0.45
CLPTM1-211ENST00000589347 THEGQ9P2T0 379 aa12.27□□□□□ -0.45
CLPTM1-211ENST00000589347 PCDHA1Q9Y5I3 950 aa12.27□□□□□ -0.45
CLPTM1-211ENST00000589347 TRIP12Q14669 1992 aaPredicted RBP12.27□□□□□ -0.45
CLPTM1-211ENST00000589347 GBF1Q92538 1859 aa12.26□□□□□ -0.45
CLPTM1-211ENST00000589347 PNMA6FA0A0J9YX94 578 aa12.26□□□□□ -0.45
CLPTM1-211ENST00000589347 TRIM43BA6NCK2 446 aa12.26□□□□□ -0.45
CLPTM1-211ENST00000589347 ARVCFO00192 962 aa12.26□□□□□ -0.45
CLPTM1-211ENST00000589347 KIAA0355O15063 1070 aa12.26□□□□□ -0.45
CLPTM1-211ENST00000589347 DNAJB2P25686 324 aa12.26□□□□□ -0.45
CLPTM1-211ENST00000589347 LIFRP42702 1097 aa12.26□□□□□ -0.45
CLPTM1-211ENST00000589347 HSD17B4P51659 736 aa12.26□□□□□ -0.45
CLPTM1-211ENST00000589347 STXBP2Q15833 593 aa12.26□□□□□ -0.45
CLPTM1-211ENST00000589347 IGDCC4Q8TDY8 1250 aa12.26□□□□□ -0.45
CLPTM1-211ENST00000589347 CUL5Q93034 780 aa12.26□□□□□ -0.45
CLPTM1-211ENST00000589347 TRIM43Q96BQ3 446 aaPredicted RBP12.26□□□□□ -0.45
CLPTM1-211ENST00000589347 RRP36Q96EU6 259 aaKnown RBP12.26□□□□□ -0.45
CLPTM1-211ENST00000589347 RNPC3Q96LT9 517 aaKnown RBP12.26□□□□□ -0.45
CLPTM1-211ENST00000589347 PIGSQ96S52 555 aa12.26□□□□□ -0.45
CLPTM1-211ENST00000589347 UHRF1Q96T88 793 aaPredicted RBP12.26□□□□□ -0.45
CLPTM1-211ENST00000589347 SLC12A7Q9Y666 1083 aa12.26□□□□□ -0.45
CLPTM1-211ENST00000589347 DDX49Q9Y6V7 483 aaKnown RBP12.26□□□□□ -0.45
CLPTM1-211ENST00000589347 GCOM1H8Y6P7 765 aaPredicted RBP12.25□□□□□ -0.45
CLPTM1-211ENST00000589347 KPNA6O60684 536 aa12.25□□□□□ -0.45
CLPTM1-211ENST00000589347 CENPBP07199 599 aaPredicted RBP12.25□□□□□ -0.45
CLPTM1-211ENST00000589347 HMGB1P09429 215 aaKnown RBP12.25□□□□□ -0.45
CLPTM1-211ENST00000589347 POLR2MP0CAP2 368 aa12.25□□□□□ -0.45
CLPTM1-211ENST00000589347 EIF2AK2P19525 551 aaKnown RBP12.25□□□□□ -0.45
CLPTM1-211ENST00000589347 SMARCA1P28370 1054 aa12.25□□□□□ -0.45
CLPTM1-211ENST00000589347 GHRHRQ02643 423 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms