RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 TRMT44Q8IYL2 757 aaKnown RBP11.21□□□□□ -0.61
VPS25-202ENST00000589219 CCAR2Q8N163 923 aaKnown RBP11.21□□□□□ -0.61
VPS25-202ENST00000589219 ANKRD20A12PQ8NF67 263 aa11.21□□□□□ -0.61
VPS25-202ENST00000589219 SLC10A4Q96EP9 437 aa11.21□□□□□ -0.61
VPS25-202ENST00000589219 TRIM34Q9BYJ4 488 aa11.21□□□□□ -0.61
VPS25-202ENST00000589219 TMEM60Q9H2L4 133 aa11.21□□□□□ -0.61
VPS25-202ENST00000589219 NYAP2Q9P242 653 aa11.21□□□□□ -0.61
VPS25-202ENST00000589219 PI4KBQ9UBF8 816 aa11.21□□□□□ -0.61
VPS25-202ENST00000589219 SYNPO2Q9UMS6 1093 aa11.21□□□□□ -0.61
VPS25-202ENST00000589219 PPP1R3GB7ZBB8 358 aa11.2□□□□□ -0.62
VPS25-202ENST00000589219 MPHOSPH10O00566 681 aaKnown RBP11.2□□□□□ -0.62
VPS25-202ENST00000589219 RPN1P04843 607 aaKnown RBP11.2□□□□□ -0.62
VPS25-202ENST00000589219 NFIAQ12857 509 aa11.2□□□□□ -0.62
VPS25-202ENST00000589219 PAK1Q13153 545 aa11.2□□□□□ -0.62
VPS25-202ENST00000589219 TBX2Q13207 712 aaPredicted RBP11.2□□□□□ -0.62
VPS25-202ENST00000589219 MKRN4PQ13434 485 aaPredicted RBP11.2□□□□□ -0.62
VPS25-202ENST00000589219 STIM1Q13586 685 aa11.2□□□□□ -0.62
VPS25-202ENST00000589219 KARSQ15046 597 aaKnown RBP11.2□□□□□ -0.62
VPS25-202ENST00000589219 PKN2Q16513 984 aaKnown RBP11.2□□□□□ -0.62
VPS25-202ENST00000589219 TMEM266Q2M3C6 531 aa11.2□□□□□ -0.62
VPS25-202ENST00000589219 LETM2Q2VYF4 491 aa11.2□□□□□ -0.62
VPS25-202ENST00000589219 FILIP1LQ4L180 1135 aa11.2□□□□□ -0.62
VPS25-202ENST00000589219 SPECC1LQ69YQ0 1117 aa11.2□□□□□ -0.62
VPS25-202ENST00000589219 MCTP2Q6DN12 878 aa11.2□□□□□ -0.62
VPS25-202ENST00000589219 NYAP1Q6ZVC0 841 aa11.2□□□□□ -0.62
VPS25-202ENST00000589219 CABP7Q86V35 215 aa11.2□□□□□ -0.62
VPS25-202ENST00000589219 MTMR8Q96EF0 704 aa11.2□□□□□ -0.62
VPS25-202ENST00000589219 PRMT6Q96LA8 375 aaPredicted RBP11.2□□□□□ -0.62
VPS25-202ENST00000589219 C16orf45Q96MC5 204 aaPredicted RBP11.2□□□□□ -0.62
VPS25-202ENST00000589219 MAP7D2Q96T17 732 aa11.2□□□□□ -0.62
VPS25-202ENST00000589219 RAB34Q9BZG1 259 aa11.2□□□□□ -0.62
VPS25-202ENST00000589219 VEZTQ9HBM0 779 aa11.2□□□□□ -0.62
VPS25-202ENST00000589219 RIC8AQ9NPQ8 531 aa11.2□□□□□ -0.62
VPS25-202ENST00000589219 INTS13Q9NVM9 706 aa11.2□□□□□ -0.62
VPS25-202ENST00000589219 RWDD2AQ9UIY3 292 aa11.2□□□□□ -0.62
VPS25-202ENST00000589219 CTNND2Q9UQB3 1225 aa11.2□□□□□ -0.62
VPS25-202ENST00000589219 ITIH6Q6UXX5 1313 aa11.19□□□□□ -0.62
VPS25-202ENST00000589219 CLRN2A0PK11 232 aa11.19□□□□□ -0.62
VPS25-202ENST00000589219 MANSC4A6NHS7 340 aaPredicted RBP11.19□□□□□ -0.62
VPS25-202ENST00000589219 ZBTB5O15062 677 aa11.19□□□□□ -0.62
VPS25-202ENST00000589219 SLC26A4O43511 780 aa11.19□□□□□ -0.62
VPS25-202ENST00000589219 CCNT1O60563 726 aaKnown RBP11.19□□□□□ -0.62
VPS25-202ENST00000589219 ALDH1A1P00352 501 aa11.19□□□□□ -0.62
VPS25-202ENST00000589219 CD44P16070 742 aaKnown RBP11.19□□□□□ -0.62
VPS25-202ENST00000589219 GCFC2P16383 781 aaKnown RBP11.19□□□□□ -0.62
VPS25-202ENST00000589219 IREB2P48200 963 aaKnown RBP11.19□□□□□ -0.62
VPS25-202ENST00000589219 FXR2P51116 673 aaKnown RBP eCLIP11.19□□□□□ -0.62
VPS25-202ENST00000589219 MKRN3Q13064 507 aaKnown RBP11.19□□□□□ -0.62
VPS25-202ENST00000589219 PTPN14Q15678 1187 aa11.19□□□□□ -0.62
VPS25-202ENST00000589219 SPRYD7Q5W111 196 aa11.19□□□□□ -0.62
VPS25-202ENST00000589219 CEP135Q66GS9 1140 aa11.19□□□□□ -0.62
VPS25-202ENST00000589219 TMEM179Q6ZVK1 233 aa11.19□□□□□ -0.62
VPS25-202ENST00000589219 TEX2Q8IWB9 1127 aa11.19□□□□□ -0.62
VPS25-202ENST00000589219 TBCKQ8TEA7 893 aa11.19□□□□□ -0.62
VPS25-202ENST00000589219 CUL5Q93034 780 aa11.19□□□□□ -0.62
VPS25-202ENST00000589219 MKL1Q969V6 931 aa11.19□□□□□ -0.62
VPS25-202ENST00000589219 CALML4Q96GE6 196 aa11.19□□□□□ -0.62
VPS25-202ENST00000589219 UBA5Q9GZZ9 404 aa11.19□□□□□ -0.62
VPS25-202ENST00000589219 CPVLQ9H3G5 476 aa11.19□□□□□ -0.62
VPS25-202ENST00000589219 DNAJC18Q9H819 358 aa11.19□□□□□ -0.62
VPS25-202ENST00000589219 KANSL2Q9H9L4 492 aa11.19□□□□□ -0.62
VPS25-202ENST00000589219 JMJD4Q9H9V9 463 aa11.19□□□□□ -0.62
VPS25-202ENST00000589219 KBTBD4Q9NVX7 518 aa11.19□□□□□ -0.62
VPS25-202ENST00000589219 STK17AQ9UEE5 414 aa11.19□□□□□ -0.62
VPS25-202ENST00000589219 FAM198AQ9UFP1 575 aa11.19□□□□□ -0.62
VPS25-202ENST00000589219 GOLGA6L9A6NEM1 432 aa11.18□□□□□ -0.62
VPS25-202ENST00000589219 TMEM232C9JQI7 657 aa11.18□□□□□ -0.62
VPS25-202ENST00000589219 ARHGAP6O43182 974 aa11.18□□□□□ -0.62
VPS25-202ENST00000589219 RHOBTB3O94955 611 aa11.18□□□□□ -0.62
VPS25-202ENST00000589219 TBC1D8O95759 1140 aa11.18□□□□□ -0.62
VPS25-202ENST00000589219 ZBTB48P10074 688 aaPredicted RBP11.18□□□□□ -0.62
VPS25-202ENST00000589219 MRPL12P52815 198 aaKnown RBP11.18□□□□□ -0.62
VPS25-202ENST00000589219 AMPD3Q01432 767 aa11.18□□□□□ -0.62
VPS25-202ENST00000589219 TRIM14Q14142 442 aa11.18□□□□□ -0.62
VPS25-202ENST00000589219 SYCP1Q15431 976 aa11.18□□□□□ -0.62
VPS25-202ENST00000589219 CALCRLQ16602 461 aa11.18□□□□□ -0.62
VPS25-202ENST00000589219 CERKLQ49MI3 558 aaPredicted RBP11.18□□□□□ -0.62
VPS25-202ENST00000589219 NAALADL2Q58DX5 795 aa11.18□□□□□ -0.62
VPS25-202ENST00000589219 KLHL10Q6JEL2 608 aa11.18□□□□□ -0.62
VPS25-202ENST00000589219 TATDN1Q6P1N9 297 aa11.18□□□□□ -0.62
VPS25-202ENST00000589219 ADGRF4Q8IZF3 695 aa11.18□□□□□ -0.62
VPS25-202ENST00000589219 IGSF22Q8N9C0 903 aa11.18□□□□□ -0.62
VPS25-202ENST00000589219 NOC3LQ8WTT2 800 aaKnown RBP11.18□□□□□ -0.62
VPS25-202ENST00000589219 MED15Q96RN5 788 aa11.18□□□□□ -0.62
VPS25-202ENST00000589219 MTRQ99707 1265 aa11.18□□□□□ -0.62
VPS25-202ENST00000589219 CFHR5Q9BXR6 569 aa11.18□□□□□ -0.62
VPS25-202ENST00000589219 BLZF1Q9H2G9 400 aa11.18□□□□□ -0.62
VPS25-202ENST00000589219 TMX1Q9H3N1 280 aa11.18□□□□□ -0.62
VPS25-202ENST00000589219 VAT1LQ9HCJ6 419 aa11.18□□□□□ -0.62
VPS25-202ENST00000589219 GPCPD1Q9NPB8 672 aa11.18□□□□□ -0.62
VPS25-202ENST00000589219 TMOD2Q9NZR1 351 aa11.18□□□□□ -0.62
VPS25-202ENST00000589219 LIMA1Q9UHB6 759 aaKnown RBP11.18□□□□□ -0.62
VPS25-202ENST00000589219 GPR25O00155 361 aa11.17□□□□□ -0.62
VPS25-202ENST00000589219 RIOK3O14730 519 aaKnown RBP11.17□□□□□ -0.62
VPS25-202ENST00000589219 PSMA7O14818 248 aa11.17□□□□□ -0.62
VPS25-202ENST00000589219 ZSCAN12O43309 604 aa11.17□□□□□ -0.62
VPS25-202ENST00000589219 RRP9O43818 475 aaKnown RBP11.17□□□□□ -0.62
VPS25-202ENST00000589219 PLCG1P19174 1290 aa11.17□□□□□ -0.62
VPS25-202ENST00000589219 CASP1P29466 404 aa11.17□□□□□ -0.62
VPS25-202ENST00000589219 TNNI2P48788 182 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms